Os01g0706900

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0706900| Description = Similar to Auxin amidohydrolase| Version = NM_001050555.1 GI:115439480 GeneID:4327677| Length = 7210 bp| Definition...")
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Gene Name

Os01g0706900

Description

Similar to Auxin amidohydrolase

Version

NM_001050555.1 GI:115439480 GeneID:4327677

Length

7210 bp

Definition

Oryza sativa Japonica Group Os01g0706900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31083428..31090637

Sequence Coding Region

31083755..31084606,31088566..31088691,31090166..31090558

Expression

GEO Profiles:Os01g0706900

Genome Context

<gbrowseImage1> name=NC_008394:31083428..31090637 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31083428..31090637 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgtgcgcgtgcgtctgccatgggcgccgctcctcctccgcacctgcgtagccatgacctcgttgtcgtcgtcgccgtcgccgcggcggcgctatgtctcgcgtgccgaggtgcgtcggcgggcggcggcggcggcgtcgacgtgctcgatcgggcgaggcggccggagttcgcggcgtggatggcgggcgtcaggtgggccatccacgagcggccagagctggcgttcgaggagatcgagaccagcaggctggtgagggcggagctcgacgccatgggcgtcgcgtacaggcacccggtcgccggcacgggcgtcgtcgcgaccgtaggcaccgggcgcccgccgttcgtcgcgctgcgcgccgacatggatgcactcccgatgcaggaggaggtgcagtgggagcacaagagtaaggtggccatgaagatgcacgcctgcggccacgacgcacacaccaccatgctcctcggcgccgccaggatcctccaggagcgacgccatgagctgcagggtacggtggtcctcctcttccagccgggggaggaggtgggcaccggggccaggaggatggtggaagccggcgccgtggacaacgtggaggccatcttcgggttccacgtcagcgtggagctccccaccggcgtggtgggatcgcggcccggcccgctgctcgccggctgcggcttcttcgaggcggtgatcaccgggaagggcggccacgccgcacacccccacgccagcgtcgaccccatcttggccgcttccaccgtcgtcctcgccctgcagggcctcgtctcgcgggaggccgacccgctggaggcccaggtggtgacggtgacgaggttcctcgccggcgacgcgctcaacgtgatcccggagtcgatcacgatcggcggcacgttccgggtgttctcgaacgagggcttcttgcggctgaagcggcggatcgaggaggtgatcgtggcgcagtcggcggtgtaccggtgcgccgcggcggtggacttccacgcggggggcaggccgctgctgcccccgaccatcaacagcgcggcgctgcacgcgcacttccaggccgtcgcggcggagacgctcggcgcctcggccgcggtcctcggcgcgatggagccgtgcatggggagcgaggacttcgccgtcttctccgaggccgtgccggcgtcccacttctacttcgtcggggtgcgcaacgaggcggaggggctggtgcacctcgcgcactcgccgcacttccgcgtcgacgacgccgcgctcccgtacggcgcggcgttgcacgccagcctcgccatgaggtacctggacgaacgccggcgcgagggcggctcgcaccctcacgaggaactctag</cdnaseq>

Protein Sequence

<aaseq>MARARASAMGAAPPPHLRSHDLVVVVAVAAAALCLACRGASAGG GGGVDVLDRARRPEFAAWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPV AGTGVVATVGTGRPPFVALRADMDALPMQEEVQWEHKSKVAMKMHACGHDAHTTMLLG AARILQERRHELQGTVVLLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGV VGSRPGPLLAGCGFFEAVITGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLE AQVVTVTRFLAGDALNVIPESITIGGTFRVFSNEGFLRLKRRIEEVIVAQSAVYRCAA AVDFHAGGRPLLPPTINSAALHAHFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEA VPASHFYFVGVRNEAEGLVHLAHSPHFRVDDAALPYGAALHASLAMRYLDERRREGGS HPHEEL</aaseq>

Gene Sequence

<dnaseqindica>6032..6883#1947..2072#80..472#ggacatcgcatcgcgtgtatacttaccaattaccgtacccgcggccggtaccgctcgtcctcggtcgcgaccgcgcgccatggcgcgtgcgcgtgcgtctgccatgggcgccgctcctcctccgcacctgcgtagccatgacctcgttgtcgtcgtcgccgtcgccgcggcggcgctatgtctcgcgtgccgaggtgcgtcggcgggcggcggcggcggcgtcgacgtgctcgatcgggcgaggcggccggagttcgcggcgtggatggcgggcgtcaggtgggccatccacgagcggccagagctggcgttcgaggagatcgagaccagcaggctggtgagggcggagctcgacgccatgggcgtcgcgtacaggcacccggtcgccggcacgggcgtcgtcgcgaccgtaggcaccgggcgcccgccgttcgtcgcgctgcgcgccgacatggatgcactcccgatgcaggtaacgtatgtgggagacagcccgggggggcaacctgccatggctcattgatttcttatgcacgtattgattggaattcttgttttatctgttaagcgttttggttggagtagtcatttgaatgatggaacctgctgcctgccttttcaaaaaaaaaaaaaaggaaagggaaaaaaaagaatgacggaatcgatctgtagggtttctgtgttatgtttttctcaggtaaaaatttaagtgaattggatgaaaaattcaggtgttcagtggagaggcatcagtgcatataaatcgagcctccctttagaatggagcaatttcaaaggaatttttagaagaataaaataaaaaaaattatgagcacctacaaaattattgcgtttcaacgagctataattgttaagccgttgcaaggcgcaagcttgtgtttaataaagcagtagaggcacagtaacatagaacctagaagagttgtgttatgtttaggttgtacagaaatctaaccacaccttctaattctataagttgatgtttaataaacttgataaaaattagagtattatgtacttttcagggcaaatatagacatttgtacatcgaattactttacttaaattatgtccaaaatatggccggagtgagttaccatctctttgtttacacgatgtctaaaacaacagcaagtctccaataaacatgtttttttaatcatgcattctataacatgcttaacttataaccatatgaaaacattttccataacaatttttgtcaaatcattgtgtttttgtaagttgtttttatgtttgactacatctattttaaaatgttgtcaattttgagacattatttcatttcattttagtaataaaaataaaatgtttaaccattataatgtcccaccgcataagtcatatgcgtacctatgattgattttatcttctactcaaaagttgagagaattgctaaattgattctaaaatgaaagtggagtgttgggagcttgctcttgcaaacacacccttacatttaacttgagcttattttttagtaacaaaatcacaaaaaagtttgtatcctctgattggatgtcctcccatactttacatgttatttacatagttatgattttttttaaaaaaaaagaacatcatagacgactattgtataaatcttaacaatttttttcaagagtttttatgactatttgataggttagactttttatgaccacttaagggatgaaaaactaactccacaacagcaaaatgtttatacacacggttccacagtctattctattgacacaataatttgtggattgaaatcaaagtttgcaacatgggtacttaagcgttaagatagcttgagatacattctgctgggttttgttcaatgcaccaaaagaatattgggatattcattctatctttcatatactgatctgcaaaagccttcaacaaaaacttgtcaggaggaggtgcagtgggagcacaagagtaaggtggccatgaagatgcacgcctgcggccacgacgcacacaccaccatgctcctcggcgccgccaggatcctccaggagcgacgccatgagctgcaggttactattgcaactatactccctcttgctcctcatccgctgttatctctttcaaagtttgctcttcttgctcaatagcttgcctgttggcttatcagagacagttaaattttaatttttatacttaattttagttaattttgattttttattatagtttattttttagcattgattttcaattgttaaaaaataaaaatttaagtataaaagttttatactacctccgtcccaaaataagtgtagccgtaaaaatccgtgtccaacatttgacaatccgtcttatttgaaaattttataaaaaaaataaaaaaaatagtcacacctgaaaattattcatgttttatcatctaataacaataaaaatagtaatcataaaaaatttaaataaaacaaacgatcaaacgttagacataaatagtacaaaactgcacttattttgggaccgagggagtacataatttcagttgtttcgttgattttctttttgcggcttatcagtcatagagtgcatgagatgagagatgcgaacccttgcgctgtgagcttgtgagtgcacctgatgacctgaacaggaatcaagatccgttacagttattacattgactgcaagttaggcagtcacatcccttcacaaccgtcggatcaagctgatgaacgacagatggctgtgccacgtcataaccaagctaacaacgctacagtatatgctacagtacgctacaggactatacgcgtgctacagtgttctggccgaatatgagatgtttttctttgatctaacggtcacgtaaggactgctaaagttgcagtccacattacaactgcaggtgatctctatcccctgaacagttataggcttgaatattttagatgtctgatttgatttgatttgatttttttttaaaaaaatggcgtatgtggttggaacagaaccgcgagatcctttagaaaaaaaagggaaaactgtgcactgctataatatatcagttagctcgatcatttgtttgttgcggtgtctttttcccaacagattcttcaaatatttcttgttcacagttgaagcaacgacatcagcctgttataattcattttaatcatatctctatttcccttttctttgcttcgatttcttttctctcaaaagaaaaaatcgtgctgagattttgcttttcaactgcgaccctaaccaactaattaaaatgattagcattatcagatttgtaactttgttctgtcaacgacacatggttcctagaaaaagacgttagtggacgatggggggtaaaaacgtttcctaaatttatccccgtgagtaaacggggacaacgatttaatatgaaacatatttagcattattgtactgaattaaaatggtcagattttattggaacgattgcagacatgttggatagtttgacatcatacgtaagcgtcgctgaaattgagttctggagtactacgtagtgaatacaccctgtgaacatcaaacaagattttcgacgggatacgccgggcgtctctgtcaacgtattcagcccgagtaatgtctgtcagcgaagtcgttcctgacatcctgtggatgaaattgcagcaagtcacaaagctttgtttcttgcggacggatcgagtcctcttctggagaagtggagagtgcttatcccggccaaatggaatctaggagcagcatgcgtacttttttcttcgggcaataggcgtttccaaaatcagttactgcacttcaagtttgcctctttttttttcaaaaaaaacaaaaaataatttgacttcaatttgataatttatgtcccttctgatgctatgcattgaagcaacacctgacctgagagacagtgaattggaggagaatccaaacaaggacaggcgaaccgtcgtaaattttcctagaggcttgttcttgcgggcgaacacctatggtgatgtcagtttcatattgttcagtactctattttgcagctgaaagcatcagcggtatgtgtttaatatactttctgaatatggtagacaacggtttgctatatatattggtacacttattatgagtgacgcagcggctgtcaaagttaaagcacactttctaaaatattaaacggtgtgttttttaaaataaaaatttaggtaagttgattttaaaatcacattaatccattttatgtttatttgaaataaaatccaaaatttgaaaaataaaaaagagagtttaagtacgaatacaattttaaaacaattgaaattgaaaataacaaaataaggaatattaaaaggatagaccatatagaacacaataaaagattaattaaaattcgaaataaaaaacaaaattaattctgaaattataaaaataaaaataagagttcaactaggaatacaatttataaataactaaaattcgtaataaaaagtagagattattgaaagaagagaccatctagaacacttgacaagattaactaaaatttggtataacaaataaaataaattctaaaaatagaaaaaatattataaaagttaaagtatgaatataatttaaaaataaaaaatatcaaaacaagaaatatggaatttttttaaaaaaacatttagaacacaatgatgataaatgacaataaagagaagagaagagtagagtggtgactgtttttgagccatctaatagttataaacaaaacctcaaatagaatctcaatgatgattaaaattgggatgacagacaggctgttaagcagcagttacgacggttgatgggacttctagagagaaaaaaataaacccctaatgataatcatgttcgattttgaaatctcaatgaaaataaagaggggaggcagcggacagccgtagaggagtacaatggaaatgctaccgatggtttggcgggtcttcgaaagttaaaaaaaatcaatttttaaaatcacaatgacaataaagagagaagacaacggacgggtaatagataagtataatggcaatgtttgacgggacacctaaaaattataaaaacgaaacccaacgagacaataaactctaaaatttgtaaggtctaattttgaaaggatctgaggaaaatgaatagaaacagtgatagatcgaacaagcaaataaaaaatgtgacaaaaaataaggggtagcaaatacatataacttttaaaaactaaaaaattagaaacacatagatgataagttttagtctttcaaagtcttaagacaaaaaaagagctatttaacaatttttaaataaattatattaaaaaatagataattttgtatgggtgctagccgcgccacctagttaattactttagaaaataatattaatctatttttaaaattttttaagctaatactccttccgtacttataaatgaattcatttaggacaatgtgtaaatcaaaccttgggaatataaatcacgaataactctcatgttgttgagtttgaaaatgtagaaattacatgaatagatttgtcttgaaaaatattttcataaaagtatacatatatcacttttcaataaatatttttatagaaacaagaagtcaaaattgtgttttggagaccgtgtcgctatccaaaacgattttctttacgagtacggagggagtacttaattaatcatgtactctctccgttttttaatagatggcgtcgttgattttttctcacatgtttgaccattcgtcttattaaaaaaatttatgtaattataatttattttgttatgagttgttttatcacccatagtactttaagtgtgatttatatattatatatttgtataaaatttttaaataagatgaatagttaaatatgtgagaaaaagtaaatggcgtcatatcttagaaaacgaacggagggagtactaagtactaactcgcaatattgttgcttgactgcatcccccaatacagcctaagcaaagtctggtcttcttttgcagggtacggtggtcctcctcttccagccgggggaggaggtgggcaccggggccaggaggatggtggaagccggcgccgtggacaacgtggaggccatcttcgggttccacgtcagcgtggagctccccaccggcgtggtgggatcgcggcccggcccgctgctcgccggctgcggcttcttcgaggcggtgatcaccgggaagggcggccacgccgcacacccccacgccagcgtcgaccccatcttggccgcttccaccgtcgtcctcgccctgcagggcctcgtctcgcgggaggccgacccgctggaggcccaggtggtgacggtgacgaggttcctcgccggcgacgcgctcaacgtgatcccggagtcgatcacgatcggcggcacgttccgggtgttctcgaacgagggcttcttgcggctgaagcggcggatcgaggaggtgatcgtggcgcagtcggcggtgtaccggtgcgccgcggcggtggacttccacgcggggggcaggccgctgctgcccccgaccatcaacagcgcggcgctgcacgcgcacttccaggccgtcgcggcggagacgctcggcgcctcggccgcggtcctcggcgcgatggagccgtgcatggggagcgaggacttcgccgtcttctccgaggccgtgccggcgtcccacttctacttcgtcggggtgcgcaacgaggcggaggggctggtgcacctcgcgcactcgccgcacttccgcgtcgacgacgccgcgctcccgtacggcgcggcgttgcacgccagcctcgccatgaggtacctggacgaacgccggcgcgagggcggctcgcaccctcacgaggaactctagtttcgtccagtcgctgcatctgccttgcatccgacttggcgacgtcgagtcgccacggcgccggcggcgtctctgttcagcccacgcgcacggcggttcgcggagctcaagatggtcgaggttaggtatccgcggcggattttgtcatcgacgattacactgtaaggaattctgggctcgaccttggcattctgacgaaaacctaggtaggaatgtagaatgggcgattgcatgttcgatgcggcgccagcggcccagcgcggtgcaaattgtaaagctgataagctgcacgcacgcagaaattatctgagaagaagagttcaggcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0706900, RefSeq:Os01g0706900