Os10g0502400

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0502400| Description = Similar to Glutamyl-tRNA reductase 2 (EC 1.2.1.70) (GluTR) (Fragment)| Version = NM_001071526.1 GI:115482795 GeneID:4...")
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Gene Name

Os10g0502400

Description

Similar to Glutamyl-tRNA reductase 2 (EC 1.2.1.70) (GluTR) (Fragment)

Version

NM_001071526.1 GI:115482795 GeneID:4349044

Length

3220 bp

Definition

Oryza sativa Japonica Group Os10g0502400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19616379..19619598

Sequence Coding Region

19616665..19617798,19617934..19618175,19619134..19619371

Expression

GEO Profiles:Os10g0502400

Genome Context

<gbrowseImage1> name=NC_008403:19616379..19619598 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19616379..19619598 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcgagcacgacgtcagcgacggccgccgggggcgcgttcgccgccgcgaagacgcgggcggggtcgtcggcggcgggcggcggcgcgtgcgcgagggtcgccgccggcgggcggaggcggtccggcgtggtggtgcggtgcgacgccggcgtggaggcgcaggcccaggcgcaggcggtggccaaggccgccagcgtcgccgcgctcgagcagttcaagatctccgccgaccggtacatgaaggaaagaagtagcatagcggtaataggcctcagtgtacacactgcaccagtggagatgcgtgagaaacttgctgttgcagaggaactatggccccgtgctatctcagaactcaccagtctgaatcatattgaagaggctgctgttcttagtacctgcaatagaatggaaatctatgtggtagctttatcgtggaaccgtgggattagagaagtggtagactggatgtcaaagaaaagtggaatccctgcttctgagctcagggagcatctattcatgttgcgtgacagtgatgccacacgccatctgtttgaggtatctgctgggcttgactctttggttcttggagaagggcaaatccttgctcaagttaaacaagttgtcagaagtgggcaaaacagtggaggcttgggaaagaacatcgataggatgttcaaggatgcaatcactgctggaaagcgtgtccgctgcgagactaacatatcatcaggtgctgtctctgtcagttcagctgcagttgaattggccttgatgaagcttccaaagtcggaatgcctatctgctaggatgctgttgattggtgctggcaagatgggaaagttggtggttaaacatttgattgccaagggatgcaagaaagttgttgtggtgaaccgttcagtggaaagggtggatgccatccgcgaagagatgaaagacattgagattgtgtacaggcctcttacagagatgtatgaagccgctgccgaagctgatgtcgtgttcacaagcacggcatccgaaaccccattgttcacaaaggagcacgcagaggcgcttcccgctatttctgatgctatgggtggtgttcgactctttgtcgacatatccgtccccagaaatgtcagcgcctgtgtgtctgaagttggccatgcgcgagtatacaacgtcgatgacttgaaagaggttgtggaagccaacaaggaggaccggcttaggaaagcaatggaggcccaaacaatcatcacccaagaattgaaacggttcgaggcatggagggactcgctggagactgttccgactatcaagaagctgaggtcctacgccgacaggatcagggcttcggagcttgagaagtgcctccagaagatcggcgaagacgccctcaccaagaagatgagaagatccatcgaggagctcagcaccggcatcgtgaacaagcttctccacggcccattgcagcacctgagatgtgacggcagcgacagccgcaccctcgatgagacgctggagaacatgcacgccctcaacaggatgttcagcctcgacaccgagaaggcgatcattgagcagaagatcaaggcgaaggtggagaagtcccagaactga</cdnaseq>

Protein Sequence

<aaseq>MMASTTSATAAGGAFAAAKTRAGSSAAGGGACARVAAGGRRRSG VVVRCDAGVEAQAQAQAVAKAASVAALEQFKISADRYMKERSSIAVIGLSVHTAPVEM REKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSK KSGIPASELREHLFMLRDSDATRHLFEVSAGLDSLVLGEGQILAQVKQVVRSGQNSGG LGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSARMLLIG AGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAAEAD VVFTSTASETPLFTKEHAEALPAISDAMGGVRLFVDISVPRNVSACVSEVGHARVYNV DDLKEVVEANKEDRLRKAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRAS ELEKCLQKIGEDALTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENM HALNRMFSLDTEKAIIEQKIKAKVEKSQN</aaseq>

Gene Sequence

<dnaseqindica>1801..2934#1424..1665#228..465#aatccccgcatcaccaatccacacaagcttcgcagctcgcgcgccgcgggaggggagggagaaaagctcgcccccgagatttttctcctctcctctctgctcgtgtttcttggattggtccatatatccacggttcttgggggcgcggcgcgccgccattgatctggttttggttttgtgaggaggagaagttgcggtggtgctggtgctggtgctttcttgatctgatgatggcgagcacgacgtcagcgacggccgccgggggcgcgttcgccgccgcgaagacgcgggcggggtcgtcggcggcgggcggcggcgcgtgcgcgagggtcgccgccggcgggcggaggcggtccggcgtggtggtgcggtgcgacgccggcgtggaggcgcaggcccaggcgcaggcggtggccaaggccgccagcgtcgccgcgctcgagcagttcaagatctccgccgaccgtgagtatcctcctcgcgtccctagcccctccttttcttcccgcttcgagctcgccggcgttgatgcgacagctgtgaaaatctttgcgtttttcttcgtgttttggtgctttgattactgctagttcatatttgagcatgtcaattagtcaataggtaggttgtgtatggagaagaaaaggaaaagatttgggatgtcgcattgctcttttctagatttgctttgatttgtatgaactatttctgcaggttttctgctaagcgaattttgtttactacctatacgtttaaccggctaagtaatttgagagagaaaagaagaggcaatttgtgagctatcttggcattagagcgaattagcattggagatgacgaacttacacgctaacccaaaggaattattattttttgctgttctccagtgaattgcagggagaaagcacatgccaacttgtttttttgtgggttagttgtagacctgtagtagtaatacacgaaatggctttttttattatggcaaagagcttttcatagtaagtaaccgaataatagtagttcaacaaactggttactattactgcaagatgccaaattttcaaatacataaagatgaaaagaacacgtcgtagttgtattttgttttattattagctattggccaagtatgttgcatggaaaaaggttccactctatcttgttttggtcaattgtttgggaatttgaggttgtaaccctatgtaattagtaattactgcaaaaagtaggtattccagatttgcaaccattacactcataatgtaaacacaggatacacccaaaagaaaaaaaagtatccatgtgcaactattgattgaaaacgttttgtgatgcgccatcgatttttagtttcatccttttagtacaattttttacatgtttacttcttgcagtatttgacaattttttctttcactatcagggtacatgaaggaaagaagtagcatagcggtaataggcctcagtgtacacactgcaccagtggagatgcgtgagaaacttgctgttgcagaggaactatggccccgtgctatctcagaactcaccagtctgaatcatattgaagaggctgctgttcttagtacctgcaatagaatggaaatctatgtggtagctttatcgtggaaccgtgggattagagaagtggtagactggatgtcaaaggtaaggattgtttcatcaaatgctcatttgttctgtccatagtcttcttttctcgtcttttccctttttctgtgactgaagaacgcggtttgtcttagatggttctaattcctctgctgctttttttttcaacagaaaagtggaatccctgcttctgagctcagggagcatctattcatgttgcgtgacagtgatgccacacgccatctgtttgaggtatctgctgggcttgactctttggttcttggagaagggcaaatccttgctcaagttaaacaagttgtcagaagtgggcaaaacagtggaggcttgggaaagaacatcgataggatgttcaaggatgcaatcactgctggaaagcgtgtccgctgcgagactaacatatcatcaggtgctgtctctgtcagttcagctgcagttgaattggccttgatgaagcttccaaagtcggaatgcctatctgctaggatgctgttgattggtgctggcaagatgggaaagttggtggttaaacatttgattgccaagggatgcaagaaagttgttgtggtgaaccgttcagtggaaagggtggatgccatccgcgaagagatgaaagacattgagattgtgtacaggcctcttacagagatgtatgaagccgctgccgaagctgatgtcgtgttcacaagcacggcatccgaaaccccattgttcacaaaggagcacgcagaggcgcttcccgctatttctgatgctatgggtggtgttcgactctttgtcgacatatccgtccccagaaatgtcagcgcctgtgtgtctgaagttggccatgcgcgagtatacaacgtcgatgacttgaaagaggttgtggaagccaacaaggaggaccggcttaggaaagcaatggaggcccaaacaatcatcacccaagaattgaaacggttcgaggcatggagggactcgctggagactgttccgactatcaagaagctgaggtcctacgccgacaggatcagggcttcggagcttgagaagtgcctccagaagatcggcgaagacgccctcaccaagaagatgagaagatccatcgaggagctcagcaccggcatcgtgaacaagcttctccacggcccattgcagcacctgagatgtgacggcagcgacagccgcaccctcgatgagacgctggagaacatgcacgccctcaacaggatgttcagcctcgacaccgagaaggcgatcattgagcagaagatcaaggcgaaggtggagaagtcccagaactgagattgaagaagagatttttttttttcagcccgtgtatctactatgtatactactaccatatctgtccagacattctaattccaattttttttctctctctcttgagcctttgcttactgagccctcgctgagttggtcaaattgtctcgtgaattagcgccatggctgctgctagagataactaggaaaatgccttgtttgtaaattactgcatctgctgtggcaagagctccattttgaagatattatatacacgctgttggtgaaataaaatcagaagttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0502400, RefSeq:Os10g0502400