Os01g0709500

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0709500| Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)| Version = NM_001050569...")
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Gene Name

Os01g0709500

Description

Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)

Version

NM_001050569.1 GI:115439508 GeneID:4327824

Length

9233 bp

Definition

Oryza sativa Japonica Group Os01g0709500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31239107..31248339

Sequence Coding Region

31239480..31240104,31240188..31240431,31240901..31241302,31241954..31242208,31242700..31243071
,31243182..31243286,31243752..31243959

Expression

GEO Profiles:Os01g0709500

Genome Context

<gbrowseImage1> name=NC_008394:31239107..31248339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31239107..31248339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttgctgcaggatcctttcctgtcataagccctactccacataaagctgataatgcttctgcgacgaaacatggacgttctggcttacaccatagtcctgcacctgcacctgtaggcttgcctccatctgaaggaaatgcacgaggaaatcctgcgtatgcaccacgtcatccccatgaatatcactcgccttcaaattctccagaacctggtctaccacctgtgaatccgcccgacagtcatgcatttaaaaagcccaagagtttggcaccagcaccccaatcatttccgccaccgcctccgagttcatattgcatggcgttaaattgtcaagatcctctgaccaatagtctccctggaactacatgtctttgtgtgtggccaataaaagttgagcttcgtttaggtatagctttgtacacattctttgcattggtatcagaacttgcacaagatattgcatctggagtgctcatgaaacaaagtcaagttcgtgtaatgggagcaaatgctgcaactgaggacccagagaaaacagttgtccttattgatcttgtgccactgggagaaaaatttgacaaggcaacagcacttttagtatttgaaaggttttggcacaagcaggtcaacataaactctatgcattttggaaactatgatgtgttatatgttacctaccaaggtcttcctccgtcgccaccaacagctcccaggatgaacaatggtcttagcaatgttaatgatccaaggttgcatccacttgctgttgatgtgggaaaccacagagaaacaaaaagcaggggcataattgttataattgttctttcaagtgtctttgcttttattttatgttctggagctgcgttggtaatttgtttcaagattagaaaccgcaaccatttaactgaagagtcacctatgccaccgaagcctgcaggtcctgggtctgcagttgttgggagcaggctaggaagcagacctatttcagcatctccatctttcagctcaagcatagtgacatataaagggacagcgaaaacatttagcttgattgagatggaaagagctacacaaagatttgacaactccagaattattggcgagggtggttttggacgtgtttatgaaggtattcttgaggatggagaacgggttgctgtcaaaattcttaagagggacgaccagcaagttacacgggaatttttagctgagcttgagatgcttagccgattgcatcacagaaacctggttaagttgataggtatatgcacagaagaacatatccggtgtcttgtgtatgagcttgttccaaatggtagtgtggaatctcacttgcacggatcagataagggaactgctccacttgattgggatgctaggcttaaaattgcacttggtgctgcacgtgctcttgcttatttgcatgaagattctagtccccgtgtcatacaccgtgacttcaagtcaagtaacatcttattggaacatgacttcacccccaaggtgtcagactttggcctagcaagaacagccataggtgaggggaatgagcatatttcaactcgtgttatgggaactttcgggtatgttgctcctgaatacgcaatgactgggcatcttctagtaaagagtgatgtctacagctatggtgtcgtcctccttgagcttcttaccggaaggaaaccggtggatattttgagacctccagggcaagaaaatttagttgcatgggcttgtccttttcttactagcagagatggcttggaaacaataattgatccatcacttggaaatagcatcctattcgatagcattgcaaaagtagcagctattgcttctatgtgcgtgcagcctgaggtggatcagcgcccatttatgggtgaagttgttcaagctttgaagttggtatgcgatgaaggcagcgagttcaatgaatcaggaagtttcagccaagatttacatattcaggattctgggattataagtagagcaagcctggatgtggacgtagaacctgttgtatctgctgagctgttcaatgcatcagcacattatgacactcttgatgcatctggttcttttcgacgatattcaagttcaggtcctcttagggtaggtagaaccgggcacaatagggagaggggtttatcaactggtagctcaagcgagcactgtggtacacaaagattcaggatagattcagagtag</cdnaseq>

Protein Sequence

<aaseq>MFAAGSFPVISPTPHKADNASATKHGRSGLHHSPAPAPVGLPPS EGNARGNPAYAPRHPHEYHSPSNSPEPGLPPVNPPDSHAFKKPKSLAPAPQSFPPPPP SSYCMALNCQDPLTNSLPGTTCLCVWPIKVELRLGIALYTFFALVSELAQDIASGVLM KQSQVRVMGANAATEDPEKTVVLIDLVPLGEKFDKATALLVFERFWHKQVNINSMHFG NYDVLYVTYQGLPPSPPTAPRMNNGLSNVNDPRLHPLAVDVGNHRETKSRGIIVIIVL SSVFAFILCSGAALVICFKIRNRNHLTEESPMPPKPAGPGSAVVGSRLGSRPISASPS FSSSIVTYKGTAKTFSLIEMERATQRFDNSRIIGEGGFGRVYEGILEDGERVAVKILK RDDQQVTREFLAELEMLSRLHHRNLVKLIGICTEEHIRCLVYELVPNGSVESHLHGSD KGTAPLDWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL ARTAIGEGNEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDI LRPPGQENLVAWACPFLTSRDGLETIIDPSLGNSILFDSIAKVAAIASMCVQPEVDQR PFMGEVVQALKLVCDEGSEFNESGSFSQDLHIQDSGIISRASLDVDVEPVVSAELFNA SAHYDTLDASGSFRRYSSSGPLRVGRTGHNRERGLSTGSSSEHCGTQRFRIDSE</aaseq>

Gene Sequence

<dnaseqindica>8236..8860#7909..8152#7038..7439#6132..6386#5269..5640#5054..5158#4381..4588#gccacaagtccaccgcagcacggcgccctctcctctcctctcctccgtctcccgcctgccgcgaaaccaaacctcgaaaataaaaccaacagtttccctcgcggccgcgcgcggagacgagtagacgacagcgaatcgctgccggtttggggcgcgcgcggatcgcggcggagggaggcaagcctttcggtttggtccgccaccaccaccacggccaccgcgcctccgcctcagcgtccgcgatttttttttttatcttttggttttggatttccccttgtcaaaactggcaggattcttctgcctgcccgagcctgactactgttgggttcgtgctcgctgctcccccacgttttgttttactagtcgccgccgcaccgaatatttttcccacctcgctcgccacgccgccgacacccgccgtccgcttccgcggctgccccgcgcgccggtgctgtgtcgccgggctgcggcggaggagtgccgaccttttcctccggggtgaatgagagagatgtgatcgtggcgaatcccgagctctgccgctgggctgggaggcggggaagggaggacaggagatggggcggcgtggaggaggaggacgagcgggaggcgcgtggattggtggctgtgtacttgcgctcgccgccaccttggtcgtctgcgtgctcgtgatccgtggagctggaggtatgtgcagtggtgtgctctgtgctgtgctggtctgctctgtgggagttttgggggcctccttgttggtctagtttggccaggatcatgcagttccgatcctgaatgctagagtggtttgcttgttagatttttgggttttgagctgccagaacccgagcctgcagcggaagtttcgtactattattaagttttttcacttgggtctctgattcttcgaattggatgggtgattgatgttgaggttgaggacgttgttgtgatttgatgggtgccctgattgtaacatctgctaggatcacagaatattgcagggtctgaagaacatcgccctcttaagcatacgagaaggaataagatggcacgtgtaaattagaaatacagatgcctcaattctatgcacctaaaatttgggggcaggggcgagtgttatgtccatttcgttagctaccttttttatttcctatgacaaatagagtgtttagctgcaaaataaactactgaagcttatttttcagaaggggcataagacagacaaattcaaatggacaaacttttagaacataaatctcggacaaatgctgtaactttgcatgcactatatatgtcaactgataatattttcagttttagttgccatcttattagtttttaacccaaaaatacaatgatcatggacatcactgatcatttttgaccagtcgtattttttgttagcaattcattgttaagttattgcccttgaacaaagctcttgccacttttatattacatttaagctccaaagacaacccattcgttctattatattttggtttctggattatggcttgctatgctgacaaattgttagctattctgttcatgttttgttttcaaaggtttgaagcaatatcatgctcctgccttcgctcgaaaaattcttctttccataacaagcggacatccacaagataacttgaatattgtacttcatccgtcacagttacaaaccccaagactccaaagcttaggtctgaaagttaatggacctataccctgagatgctttcatttttgtttatcatgtcatgtattctgaactatatgcaacttaccatatttattattttctaggactaaatgtaaaaccacctgcagcaactagcagacgtgttaacgtacagcaggaactatatgcaccaagcccaacgatcagccacagaggtacattcagaattatgatttggtttgttatcctatatatatctataaagttcatcgccactaagtgtagtcaatgctatttctctcctctcattaagtcacatcacctcaattatttctagcccttgatgattgatctatggtccaaattatcttcctccttttcttctcttatataaagtcatatcaccttagttttgcctttggatgactaatctatattaccttctttcttttccttctctcatcgagccacatcaccttagttttgtttttgaatgatcaatccatatatgattaaaatttttataaaccatatcatctcaattgtttgtagcttttttattagtcgatcaaagatgaaaattatacaaaatgtagctatattacatgttatttctactaatatcacacaaaactcccgcagcaatgcatagggtttcatctagtttcttgaaattatgttgagaaaaattgttacgttggttttccctgaaagtcgtgtattctaccctagtgggttgctttgcacagatggcttatctcactgtctagtgtctaagcaaactttttttttaaataaaggaagctttatagatctcaaacaattacattgatacaattaatctaggaccactcctggcctctgtataactaattaggatgcgcacgacctataattattgcaaaaaaaaaaagcttcattcaccaccatagcaacacttggaccgtgagaaaggccctccaaaagcgatgcctccaaaagggaatggcaaactaagcaaactgtgctgcctacaatacaacctagtgctccctgtcattcttattagtctccaatcagagaaatatccccatgtatcgagagtccaggccaattgttggttagcttgatgttgaattctatctgcatcaatgttactgtcaaatctaggttgaaaatgatgaaacctttttgcttattcataggccaatctaccctaccttcacatatgatttttccaagttacagtcaaatctaggttgaaatgttttatatctctatcctctccgtaaggcatgcaaccaataagtttgttgtagaaataataataaaaaaagagacataaggtgatgggggcaaaccagcaaacccccaactccctttattattgactagcgttaataatagaatcacatagattctagccaataatcctaaggttactatgccacccataatggaatgaaagacccttgcctactgattcctgctcccctgtggtagcctcatagaccaaaagtagagccagtaggaagtcatctgttatgaatatagcttatattgaataatagccctaaggaggcaatatataggagtacaagagagcgtatatagaaacctatatatgtacaagactatattccttaacaacatgaacaaaacctgtgtaggattagacacttttttgctctagctaatgaaatttcattgcaagattgttataagcaaacaatcatatctattaatgcattccaaaaatagttcttttatgatccactgaaggtaccttctagtgttaacttttgtacttcttgatactccccaaggacataaaaagaactcttacagacacatgatgtacattacctgttgcttgttcatctacttctacaaactttttttatagcgacacatcctatttataaccggcaggctcgtctacttaactttcatcgtgccttcgtccaccaatactcaaagcatctacccccattaatttatccatatatgagaagtatatcccacccattcagaattttatgaaacattaccttagttcatgctgaaattaattccatcaatgtatgacgcaggtcttgctattcctccacttccaacaacttcacccccagttttcccacctcccatcagatcttatcctccacttcctgcaaataagccataccccaatagtatgtctctgaagcaatttttatacaagaactatatattttttatctgcttaccattttcctgtactgaaatatgcaggaccagcagtgtctccagcatcaataatccatcccaccaaccatgggaaggcccatggagttccaattgcagcacattcaaaagaaaggcatcatcattccatgcttgtaaataatacacatggaaatacccatgcaggtccagttgtggcacctccaaagggaaggcatcaccattctttgcctgtaaataatacccgtgtaaaaggtattccaccgactgcacaactaccataatgaacctattgctggtaataaaatgattcatgaagttgtatcgagcaggacctgcctattctccttcaaattctcccagtatccatagaaaacatggcattccagttgctgcacctccaaagcaacattccagcaatttaccaccttcacatcataggccccacaaaggtatgctgacagtaaaaaaaaaaaaagtactcatctcactaaggcaatgtttgctgcaggatcctttcctgtcataagccctactccacataaagctgataatgcttctgcgacgaaacatggacgttctggcttacaccatagtcctgcacctgcacctgtaggcttgcctccatctgaaggaaatgcacgaggaaatcctgcgtatgcaccacgtcatccccatgaatatcactcgccttcaaattctccaggtcagttagacattcttgaaatttctccttttcctttatgttgtctcatttgttctaacctctgcaaatgctccagtcataccccccctaagaacaggccataacatgcacggccttctatttatcatgatgttgaataggattataggacactgagattttgcacggtgatgcaagaattatctctggtatacttgataagagtacggagattgaacttacaccttttattttagtttgcaacccgtcctaccttgctatggtgattaaacacatttggatatgatactaatatttaggtccacaaatttccaccttccactaagtttatctaaatgcaaaagttttatcttctctcaacttatgtcaatcccagtagggccaatttagctcccctgttgcttttataccaatttcaccatataatttgtttttgttattttccatgtcattacgcctatgcagaacctggtctaccacctgtgaatccgcccgacagtcatgcatttaaaaagcccaagagtttggcaccagcaccccaatcatttccgccaccgcctccgagttcatgtatgctacctgaggatactatcttttgtatatgaattcatcaatatatgtgctctatccaatcatgtaagctactcagctgtgatccattcatcttttctatttgccagattgcatggcgttaaattgtcaagatcctctgaccaatagtctccctggaactacatgtctttgtgtgtggccaataaaagttgagcttcgtttaggtatagctttgtacacattctttgcattggtatcagaacttgcacaagatattgcatctggagtgctcatgaaacaaagtcaagttcgtgtaatgggagcaaatgctgcaactgaggacccagagaaaacagttgtccttattgatcttgtgccactgggagaaaaatttgacaaggcaacagcacttttagtatttgaaaggttttggcacaagcaggtcaacataaactctatgcattttggaaactatgatgtgttatatgttacctaccaaggtaagagctatttgtaatttttattgtgtcattatacatattctctttgttaattcctataaaccttattggattttccgatattcgagtaaatccttaattattttgtttattattcaggtcaatcagttcacttcctctgtgtgtgtgtgtgtgtgtgtgagtgagtgagtgagtgaaaccactggcatgatattctttttagccggatcggccaaaggaagaggctgatcaaatttcattaagattgatggagaaaaaaaatagaaattgtaaaagagtacaacaacagtagtctgtcgaaactggtggcaccccagctagctgggtaaccggaaaaagaaaaagggtagggatgggctagagactagtcgccatctcctttcaaaattcctgctgtcctccagacagagatttcatctctaatttcattgacatagtttgttttttagaaagggtcttgatatggttactttcacttattcatacaggtcttcctccgtcgccaccaacagctcccaggatgaacaatggtcttagcaatgttaatgatccaaggttgcatccacttgctgttgatgtgggaaaccacagagaaacaaaaagcaggggcataattgttataattgttctttcaagtgtctttgcttttattttatgttctggagctgcgttggtaatttgtttcaagattagaaaccgcaaccatttaactgaagagtcacctatgccaccgaagcctgcaggtaacaagacattcaatccatgcagtgttgctgtatttatctttattagtcacatattagaaaaggtgtagcaaatgcaatctggtgaaacaatcattgtcattctttccatgactatgggtgagttcgctactggaggtttccaaccgggaacagtgcgcgcggaaaacggagcggttcattagcgcgtgattaattaagtattagcttttttttcaaaaatggatcaatatgattttttaaagcaactttcgtatagaaactttttgcaaaaaacacaccgtttaacagtttaaaaagcgtgcgcgaagaaaacgagaggggaaagttgggaaccggcagtgccgaacacaccctatatccattctgaggccttgttaggattgtttgattattttgtagaaaaccaatccacataaaatgatcattcgttttctagctttcaagaactgagaagttatgtttcatatttgtatggttgaaaagtaatattaccttgaaataatcaaagaacaagagttatatttcatgcttaagtagtgaaagtacttggaacagctttgaccaaatctgaaaggattatatttttgcaaaagttaaaaactgatgctaaattattttcttccatcaatgattgcattggaaatgtaggtcctgggtctgcagttgttgggagcaggctaggaagcagacctatttcagcatctccatctttcagctcaagcatagtgacatataaagggacagcgaaaacatttagcttgattgagatggaaagagctacacaaagatttgacaactccagaattattggcgagggtggttttggacgtgtttatgaaggtattcttgaggatggagaacgggttgctgtcaaaattcttaagagggacgaccagcaagttacacgggaatttttagctgagcttgagatgcttagccgattgcatcacagaaacctggttaagttgataggtatatgcacagaagaacatatccggtgtcttgtgtatgagcttgttccaaatggtagtgtggaatctcacttgcacggtaatattttgttctctttttttttcctctgaacagtttctaaggcatcatttgttactttatcgtgtctattttgcttggagagatgcatcaaaccagtcaagcactttgttgacaagaaattcataattctgccctgtagataatacagctgttgtcgcttataacaaagtcacacatgtgaacactgtgcactaagacatgaaatgtattgtgcactaatctcctgttacattatgtttttttaagggaatcccattacataatgtttcttaagggaattcctttccatcatgttgacaaatacaaacttgcattttataaaattttgacatgtttcatggattcatagtacatccatattctattctccttaataggtgacttttttggccagacataagtattttggccggtccgtaatagctaactagaataatatggttcttttttttaaaattccaagcaggatcagataagggaactgctccacttgattgggatgctaggcttaaaattgcacttggtgctgcacgtgctcttgcttatttgcatgaagattctagtccccgtgtcatacaccgtgacttcaagtcaagtaacatcttattggaacatgacttcacccccaaggtgtcagactttggcctagcaagaacagccataggtgaggggaatgagcatatttcaactcgtgttatgggaactttcgggtaagttttgatctgaaattattatcttactacctgtagttggttaacatcctcaccttaaaaagattatgaactctttttaggtatgttgctcctgaatacgcaatgactgggcatcttctagtaaagagtgatgtctacagctatggtgtcgtcctccttgagcttcttaccggaaggaaaccggtggatattttgagacctccagggcaagaaaatttagttgcatgggcttgtccttttcttactagcagagatggcttggaaacaataattgatccatcacttggaaatagcatcctattcgatagcattgcaaaagtagcagctattgcttctatgtgcgtgcagcctgaggtggatcagcgcccatttatgggtgaagttgttcaagctttgaagttggtatgcgatgaaggcagcgagttcaatgaatcaggaagtttcagccaagatttacatattcaggattctgggattataagtagagcaagcctggatgtggacgtagaacctgttgtatctgctgagctgttcaatgcatcagcacattatgacactcttgatgcatctggttcttttcgacgatattcaagttcaggtcctcttagggtaggtagaaccgggcacaatagggagaggggtttatcaactggtagctcaagcgagcactgtggtacacaaagattcaggatagattcagagtagtcagcttgcaggcttcttttgacgatgtggggctgtgttcattggcttcttttcgcaagccacatttcatattcattgtgaatatctgtgaagagcactgagcaatatcaccagcttctgccgggacaaggaccagttttcgaagagcactgagcaagactgcaagagtaccaacatctcgtcccgtcccgtctctgtttatacagttctagagatctataaagccggttccttttttttagtggaaagtaaagccggttcatcaactgcggttcatcaactgtaaatgttcatgtaccttcccaagtgtagccattcctttcgcatggaaggtaagtgaaatatcagatgaaatgaagggtatttttgcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0709500, RefSeq:Os01g0709500