Os01g0710700

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0710700| Description = Lipase, class 3 family protein| Version = NM_001050576.1 GI:115439522 GeneID:4327831| Length = 3002 bp| Definition ...")
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Gene Name

Os01g0710700

Description

Lipase, class 3 family protein

Version

NM_001050576.1 GI:115439522 GeneID:4327831

Length

3002 bp

Definition

Oryza sativa Japonica Group Os01g0710700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31285608..31288609

Sequence Coding Region

31286023..31286053,31287136..31288502

Expression

GEO Profiles:Os01g0710700

Genome Context

<gbrowseImage1> name=NC_008394:31285608..31288609 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31285608..31288609 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagagccagggagtcctactgtccagcaacgtcggggccggctcccggccgtggccggagctgctcggctccgcccactgggacggcctcctcgacccgctcgacctcacgctgcgccgcctcatcctgctctgcggcgacctctgccaggtcacctacgactccttcaactccgactcccactccaagtactgcggcacctgccgcttctccaggtccacgctcctcgaccgcacgcagttcccggccgccggcgacctctccgtcgccgcctacctctacgccacctccgacgccacggcgttcccggggagcatggtgtactcgatgtcgcgcgaggcgtggagcaaggagtccaactggatcggctacgtcgccgtgtccaacgacgccgcagcggccgcctcgggccagcgcgtcatctacgtcgcgtggcgcggcaccatccggtcgctggagtgggtcgacgtgctcaagccggacctggtcgaccacgacgacatcctccccgaggggcacccggggcgcggccggtcgcgcgtcatgaaggggtggtacctcatctacagctccaccgacgagcgctcccctttctccaagtacagcgcccgcgaccagatgctcgccgccgtgcgcgagctggtggcgaggtacaggaacgagagcctcggcgtcgtctgcacggggcacagcctcggcgcgtcgctcgccacgctctgcgcgttcgatatcgtcgtcaacggcgtgtccaaggtcggcgacggcgcgcacatcccggtgaccgccgtggtgttcgggagcccgcagatcgggaacccggagttcaagaagcagttcgaggagcagcccaacctgcgggcgctgcacgtcaggaacatgcccgacctcatcccgctctacccgagcggcctcctcggctacgccaacgtcggcaaaaccctccaggtcgactccaagaagtcgccctacgtgaagcgagacaccagcccaggcgactaccacaacctgcaggggatcctacacacggtggccggctggaacgggaaggacggcgagttcaagctccaggtgaagcgcagcgtcgcgctggtgaacaagtcgagcggcttcctcaaggacagcaaccttgtgccggagtcatggtgggtggagaggaacaaaggcatggtgctcggccagaacggggaatggcagctcgaggggcccgcagaggagaacctgcccgtgccaccggtggtgaccgggaagatcatcgacgacgacgtcgctgccgtggccacctccagcagtgccaaggaggataagaagacgggcaaagggtctaagcttctgtctggattgattgatcaactgctttgtgtgcctgatacatgtaaagccggagctgcgtga</cdnaseq>

Protein Sequence

<aaseq>MDKSQGVLLSSNVGAGSRPWPELLGSAHWDGLLDPLDLTLRRLI LLCGDLCQVTYDSFNSDSHSKYCGTCRFSRSTLLDRTQFPAAGDLSVAAYLYATSDAT AFPGSMVYSMSREAWSKESNWIGYVAVSNDAAAAASGQRVIYVAWRGTIRSLEWVDVL KPDLVDHDDILPEGHPGRGRSRVMKGWYLIYSSTDERSPFSKYSARDQMLAAVRELVA RYRNESLGVVCTGHSLGASLATLCAFDIVVNGVSKVGDGAHIPVTAVVFGSPQIGNPE FKKQFEEQPNLRALHVRNMPDLIPLYPSGLLGYANVGKTLQVDSKKSPYVKRDTSPGD YHNLQGILHTVAGWNGKDGEFKLQVKRSVALVNKSSGFLKDSNLVPESWWVERNKGMV LGQNGEWQLEGPAEENLPVPPVVTGKIIDDDVAAVATSSSAKEDKKTGKGSKLLSGLI DQLLCVPDTCKAGAA</aaseq>

Gene Sequence

<dnaseqindica>2557..2587#108..1474#gtacacacactccacctaatcttcttctcctcacacattcacacacacacaccccgcagaccccggcaccttaccgagcggcggctcagcacgctgctgctacgcacatggacaagagccagggagtcctactgtccagcaacgtcggggccggctcccggccgtggccggagctgctcggctccgcccactgggacggcctcctcgacccgctcgacctcacgctgcgccgcctcatcctgctctgcggcgacctctgccaggtcacctacgactccttcaactccgactcccactccaagtactgcggcacctgccgcttctccaggtccacgctcctcgaccgcacgcagttcccggccgccggcgacctctccgtcgccgcctacctctacgccacctccgacgccacggcgttcccggggagcatggtgtactcgatgtcgcgcgaggcgtggagcaaggagtccaactggatcggctacgtcgccgtgtccaacgacgccgcagcggccgcctcgggccagcgcgtcatctacgtcgcgtggcgcggcaccatccggtcgctggagtgggtcgacgtgctcaagccggacctggtcgaccacgacgacatcctccccgaggggcacccggggcgcggccggtcgcgcgtcatgaaggggtggtacctcatctacagctccaccgacgagcgctcccctttctccaagtacagcgcccgcgaccagatgctcgccgccgtgcgcgagctggtggcgaggtacaggaacgagagcctcggcgtcgtctgcacggggcacagcctcggcgcgtcgctcgccacgctctgcgcgttcgatatcgtcgtcaacggcgtgtccaaggtcggcgacggcgcgcacatcccggtgaccgccgtggtgttcgggagcccgcagatcgggaacccggagttcaagaagcagttcgaggagcagcccaacctgcgggcgctgcacgtcaggaacatgcccgacctcatcccgctctacccgagcggcctcctcggctacgccaacgtcggcaaaaccctccaggtcgactccaagaagtcgccctacgtgaagcgagacaccagcccaggcgactaccacaacctgcaggggatcctacacacggtggccggctggaacgggaaggacggcgagttcaagctccaggtgaagcgcagcgtcgcgctggtgaacaagtcgagcggcttcctcaaggacagcaaccttgtgccggagtcatggtgggtggagaggaacaaaggcatggtgctcggccagaacggggaatggcagctcgaggggcccgcagaggagaacctgcccgtgccaccggtggtgaccgggaagatcatcgacgacgacgtcgctgccgtggccacctccagcagtgccaaggaggataagaagacgggcaaagggtctaagcttctgtctggattgattgatcaactgctttgtgtgtaagtgaatttattacatgatcaaaccatttacttttgcaattgtggtaaataagtagtctgttacatatcaatagaagtgatgatgcatgatgctattacaggctttacagcaatgtggttaattattaaaggcgagacaagtttgtataagaaaaaaaaaattgtaatagtgaatcatatgcgatataatctgaagtaaaatgaagtatatgagcgcagatgacgctctatattgtaagtagtcacgtgtactccaggttactctgaaatgcggaattatcgcgaaatacaataagaactttcaaatgtcataaaagtaatgctagtttcccttttaaatttattggtaaattggcttcctttgaaaataaattgactagtgacatgaaaataggctggcaggagcaagaacaagcaaattcagtggcaatctagtactctcttcgtaccataaaaaccaacctacttaatattggatgtgacacatcctaatattacatatacctcagtccaaattcattgcactagagtgtgtaagtccaaattcattgcactagagtgtgtcacatacagtcctagattcttttttagatagtatgtatgaacgatagaaaattaatattgtttacttttagctctctgtctcggcgcgtcgcattatgtatgaattcatagtatttgaaactaatttttgctttacttgattaacatgataaattaatattttttaaaaaactttgtaaataacttaaaacaagtgacctaaataatgctctaagagtttcttttaaaagaaattgtatttttaagaagcgtgaagcagataatccgtgacaaaaatcagaaaagaacctgaaaagaataatggggctaagtgcgccgagctttgttaaaatcacgctagctttcttttaaaaaaaaagacataaatttgatgattgttggctgaagagtgatttgttgggtccaatgaaaatacagaaagtaaaaaacacagacacacaatcatcttcagaaaattgagtttatctaactccaatacactgatctttcaagtgtgtcattggttgtctttctaggcctgatacatgtaaagccggagctgcgtgagttgttgaagaccacatcagaaaaagactcgagagcggtggcgtcgaactgatatgcttgtgaagtagctggagcttgggagttgggagcgagctagattacaacaatgtcatttatcggtttttctttggaataaaatgagttgttttgttaggagaaagtagtatttttcctttctgcttttagtgtctcttgagaaagaataaaatgagtcctggcatcataagtaggtgggttagtcgactaggttcgagcctcaccacatctcaataaatatcgatatgtgacccctcctttcatatccagtatcttttaagtgtgccttgtctcctagatataatttctgtttaaaacagccttctacctgaacatgtatgatagaagcataaactgagcacaccaatttttcccttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0710700, RefSeq:Os01g0710700