Os01g0711500

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0711500| Description = Similar to Calcineurin B (Fragment)| Version = NM_001050582.1 GI:115439534 GeneID:4325933| Length = 2620 bp| Defini...")
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Gene Name

Os01g0711500

Description

Similar to Calcineurin B (Fragment)

Version

NM_001050582.1 GI:115439534 GeneID:4325933

Length

2620 bp

Definition

Oryza sativa Japonica Group Os01g0711500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31324516..31327135

Sequence Coding Region

31324516..31324545,31324689..31324905,31325000..31325082,31325653..31325712,31326114..31326222
,31326320..31326372,31326858..31326938,31327019..31327135

Expression

GEO Profiles:Os01g0711500

Genome Context

<gbrowseImage1> name=NC_008394:31324516..31327135 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31324516..31327135 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactcctcccgctcctccaactctctcgattcggggagctctctgacgctgggggagctcgcgtgcgcggcgctgattccggtgctcgccctggtggacgcggtcgtgttcgcggcggcgcaatgcttccagaagcgcccgccggggctgctgcccgctacactcgccgcccgcgcgcgccgccgcgccggtggccgcctcaccttccgtgagctcgccgacctcgccgacgagtcccgctgcttctcggtgaacgaggtggaggcactgtacgagctctacaagaagatcagctgctccatcgtcgatgacggcctgatccataaggaagagctgcaattagccttgtttagaacaccggctggaaagaatctttttctagatagagtttttgatctgtttgatgaaaagaaaaattctgttattgaatttgaagagtttattcacgcaataagtgtatttcatcctaatactcctcttgaagacaaaattgatttttcattcagattatatgatttgaggcaaaccggtttcattgaacgtgaagaggtaaaacaaatggttgttgctaccttattggagtcagaggtgcagctgtctgatgatcttgtggaagccatactagacaagacatttgaggatgctgacactgacaaggataacaggattagcaaagaggagtggaaagcttttgtactgaagcacccgtctgttataaagaagatgaccctgcccaccctgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MDSSRSSNSLDSGSSLTLGELACAALIPVLALVDAVVFAAAQCF QKRPPGLLPATLAARARRRAGGRLTFRELADLADESRCFSVNEVEALYELYKKISCSI VDDGLIHKEELQLALFRTPAGKNLFLDRVFDLFDEKKNSVIEFEEFIHAISVFHPNTP LEDKIDFSFRLYDLRQTGFIEREEVKQMVVATLLESEVQLSDDLVEAILDKTFEDADT DKDNRISKEEWKAFVLKHPSVIKKMTLPTLK</aaseq>

Gene Sequence

<dnaseqindica>1..30#174..390#485..567#1138..1197#1599..1707#1805..1857#2343..2423#2504..2620#atggactcctcccgctcctccaactctctcgtaagtcgtagtagcgcgccccccgcggcttgccgccgctgcatttcatctgggtcttctgttttcccctcttgtgggtctcgtgctcgttctgacttctgatctgtttacgtcgtcgtctgcggaattgcgggatttggtaggattcggggagctctctgacgctgggggagctcgcgtgcgcggcgctgattccggtgctcgccctggtggacgcggtcgtgttcgcggcggcgcaatgcttccagaagcgcccgccggggctgctgcccgctacactcgccgcccgcgcgcgccgccgcgccggtggccgcctcaccttccgtgagctcgccgacctcgccgacgagtcccgctgctgtaagtacagagccgcccacccctgttcagcttctgcgtttcgtccgtggccttaaatggtaatatggtatcatcgggttgtgatcgccggcagtctcggtgaacgaggtggaggcactgtacgagctctacaagaagatcagctgctccatcgtcgatgacggcctgatccataaggttaatgataaactattcttcttcttcttttacagcacatttggtgagacgtgtactcctttgattctttttagcccattggttcagtttggtcgatccatactgcagaattggaactatggttacgatgctagtagatttcggtttactaaactctgtaactcttctacttgcaaaaaggaaaaggacactggaattcttcattttagttattcaacaaggaaaaaaaataaactaacaagtcttttgaaccaattaggacgggttaaccaggttgcaatccagtagtttagtatggtgccctcatgcatgttgaaaaggacttgctagttagtaatttacggagagcagaaaaggaaaaaatgaccgaaatgtcaaatgtttacatggagagtagacatgtaaacatcagagatagaaagatatgctgcgactagccccaatagaatttctataattgtacgcttgtaactggatgatatcttccaggtgaagattttacagtggaaaatgttatagtgttacctttttttggtcactaactgtgaatgtttgtacttgttttttcaggaagagctgcaattagccttgtttagaacaccggctggaaagaatctttttctagatagagtaagtgaaaaaggcttattctcgaactcctctccgctcaaataccgccgttacctatttgggcatttggccactgaagcattttaagagttgttttgttttgagtttcctaggatgaccaactaattgacagactctcatagtttcatcattttacttgctttgaacacatactttgagctctacgtatgatgcaaagaattaaatagggaatgatgttccttgcaaagtaaagatcttaattcaaacccgttgttcttgttacctactgtattatttgttaggcaatgctttgtggtaatgtcaagacacaagctctgattacatattatgattaaaacaaattcaatttttgattttttttttgctaccatttgagttagcttttcttctccatttaggtttttgatctgtttgatgaaaagaaaaattctgttattgaatttgaagagtttattcacgcaataagtgtatttcatcctaatactcctcttgaagacaaaattgattgtaagtgtgcttcatctcggtgatcatcaagaatttctttatatgttgaattatatatcaaccattaattcttttgggggttttgtgcttctttcagtttcattcagattatatgatttgaggcaaaccggtttcattgaacgtgaagaggtatgctctattgttttgcaaatacatcagtttgacttttgaacagatatgttaagccattgattaatcttgtatgaagtttattgtgtgagaacttttggtactcaagactttgccatatcagtgtcagtctttctatcccccagcttcgaggcagcatcatttgatcatttctgttcgcatgtttgccaattgctaaataattggaatccttcgagtttcttattgaaccttttcacgaattactgaaactggtgacagcttttgtcatcttcaggaaccacgctatcatcttgtaattcttgtagtttccttgtgaaacttgatgagtaaactatataaagtcacgacatgaaataaatcataataagtcttgactcttaaatgtaaggaattctgaaatgtagacaagccagctctgcagcatatgcttccagtgtgaagttaaaactaaccacaaagctccttttttttttctcgttcaggtaaaacaaatggttgttgctaccttattggagtcagaggtgcagctgtctgatgatcttgtggaagccatactagacaaggtattaacattttcttctccttgagcccttttttgtttattcacctagcactaggaatctctaattgagttattctgcagacatttgaggatgctgacactgacaaggataacaggattagcaaagaggagtggaaagcttttgtactgaagcacccgtctgttataaagaagatgaccctgcccaccctgaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0711500, RefSeq:Os01g0711500