Os01g0712700

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0712700| Description = CMP/dCMP deaminase, zinc-binding domain containing protein| Version = NM_001050586.2 GI:297597488 GeneID:4325937| Le...")
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Gene Name

Os01g0712700

Description

CMP/dCMP deaminase, zinc-binding domain containing protein

Version

NM_001050586.2 GI:297597488 GeneID:4325937

Length

1363 bp

Definition

Oryza sativa Japonica Group Os01g0712700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31360986..31362348

Sequence Coding Region

31361292..31362230

Expression

GEO Profiles:Os01g0712700

Genome Context

<gbrowseImage1> name=NC_008394:31360986..31362348 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31360986..31362348 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggaggagaaagtggcgccgaagtctgacgctgccccggcggtggagttgctggggttcgtgatgagcgcggaggaggccgagcgcgccgcggcggcggccggggtggagacggtggaggacctgctgccgctgctcgtcccttccgcgatgcggcgcgcgcgtgccccgatctcgcggttccccgtgggcgccgtgggcctcggcgcgagcggccgcgtctacgccggcgtcaacctcgagttccggggcctcccgctgtcccattccgtccacgccgagcagttccttgtcgtcaacgcggccgccgcgggggagtcggagctgcgcgccgtcgccgtctcccacatgccctgcggccactgccgccagttcctccaggagatccgcggcgccggtgggatccgaatcattgtcacctccgacgccgaggacggctgcgcccccgagtggcgcacggtggcgtccctcctcccgcgccccttcgggccccatgatctcctccccaagcacgtccccctcgtcctcgaaccgcacgacaaccctctcggcgaacccgccgccgtcgccaatggcttcgcccacggtgacctagaggcgcgcctgagggaggcagcggaggcggccgcgcgggcggcgcatgcgccgtatagcgagtgcccgtcgggattcgccgtggcggacggcgaagggaaggtgtacgccggaggatgcctggagtccgcggcgtataatccgacactaggccccgtgcaggcggccatcatagggatggtggccgccgggggcggcgccgccggagacgtggtggcggcggcgctcgtggagaaggaagcggggttggtgtcgcaggaagcgacggccaggatcttcctggccgcggtggccccacaggccaccttccacgtgtacaattatacaccgtccgatgcatga</cdnaseq>

Protein Sequence

<aaseq>MGEEKVAPKSDAAPAVELLGFVMSAEEAERAAAAAGVETVEDLL PLLVPSAMRRARAPISRFPVGAVGLGASGRVYAGVNLEFRGLPLSHSVHAEQFLVVNA AAAGESELRAVAVSHMPCGHCRQFLQEIRGAGGIRIIVTSDAEDGCAPEWRTVASLLP RPFGPHDLLPKHVPLVLEPHDNPLGEPAAVANGFAHGDLEARLREAAEAAARAAHAPY SECPSGFAVADGEGKVYAGGCLESAAYNPTLGPVQAAIIGMVAAGGGAAGDVVAAALV EKEAGLVSQEATARIFLAAVAPQATFHVYNYTPSDA</aaseq>

Gene Sequence

<dnaseqindica>119..1057#tcctctcctctcatctcctccacactttgaggaaacgtctaagcacaagtgctaaacgcgattagaaggcagcgaaatcgtacactaaattgcacggattagagatagatctcaagcaatgggggaggagaaagtggcgccgaagtctgacgctgccccggcggtggagttgctggggttcgtgatgagcgcggaggaggccgagcgcgccgcggcggcggccggggtggagacggtggaggacctgctgccgctgctcgtcccttccgcgatgcggcgcgcgcgtgccccgatctcgcggttccccgtgggcgccgtgggcctcggcgcgagcggccgcgtctacgccggcgtcaacctcgagttccggggcctcccgctgtcccattccgtccacgccgagcagttccttgtcgtcaacgcggccgccgcgggggagtcggagctgcgcgccgtcgccgtctcccacatgccctgcggccactgccgccagttcctccaggagatccgcggcgccggtgggatccgaatcattgtcacctccgacgccgaggacggctgcgcccccgagtggcgcacggtggcgtccctcctcccgcgccccttcgggccccatgatctcctccccaagcacgtccccctcgtcctcgaaccgcacgacaaccctctcggcgaacccgccgccgtcgccaatggcttcgcccacggtgacctagaggcgcgcctgagggaggcagcggaggcggccgcgcgggcggcgcatgcgccgtatagcgagtgcccgtcgggattcgccgtggcggacggcgaagggaaggtgtacgccggaggatgcctggagtccgcggcgtataatccgacactaggccccgtgcaggcggccatcatagggatggtggccgccgggggcggcgccgccggagacgtggtggcggcggcgctcgtggagaaggaagcggggttggtgtcgcaggaagcgacggccaggatcttcctggccgcggtggccccacaggccaccttccacgtgtacaattatacaccgtccgatgcatgatgcgcatcactgatccccgtggtgggtggggagggagtgtaggaggtgaggtttggaacgagataatgttcataaaaaaagaagttaagaataaaacgataagaaaataaccttgtgtagttgggtcactgggtgattagctggtggacactgacaatcaggatccacttgttcagagtgattaatactcctctgttatgtgtatttaaggagaaaaataaaaaaatataaattgccagtgtacaagtagaactgtactagagtgacgcatgtatttatcttggaagttaggagtatcttggaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0712700, RefSeq:Os01g0712700