Os01g0713700

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0713700| Description = Similar to Rev interacting protein mis3-like| Version = NM_001185608.1 GI:297720350 GeneID:9270811| Length = 5527 bp...")
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Gene Name

Os01g0713700

Description

Similar to Rev interacting protein mis3-like

Version

NM_001185608.1 GI:297720350 GeneID:9270811

Length

5527 bp

Definition

Oryza sativa Japonica Group Os01g0713700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31401712..31407238

Sequence Coding Region

31401712..31402000,31402064..31402140,31402227..31402337,31402532..31402600,31403238..31403294
,31403402..31403440,31403545..31403649,31403746..31403828,31403921..31404002
,31404348..31404491,31404575..31404655,31404754..31404795,31405256..31405341
,31407118..31407238

Expression

GEO Profiles:Os01g0713700

Genome Context

<gbrowseImage1> name=NC_008394:31401712..31407238 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31401712..31407238 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggagggcgatgcgagtgccctggtggcggcggcggaggggaggaagccccgtcacaaggggaagcacgacaagccgaagccgtgggacgatgaccccaacattgaccactggaagatcgaggagttcgacccctcctggaacgagggcggcatgctcgaagtcacctccttctccacgctcttcccccagtaccgaggcaagtcacctcaccccacacccccatccgcgctctcctggtttcttccgcgatcggcgatcgattggttttgcctggttgttaagaagtacctgcaggaggcgtggccgattgtgaaaggcgcactgaaggagtttggggtcgcttgcgagctcaatctggtggagggatctatgaccgtttcaaccacaaggaagaccaaggatccctacatcatcattaaggccaatgaactgataaaattgctatcgaggagtgtccctgctcctcaggcaattaaaatactcaatgatgagatgagctgtgctattattaagattggtagtatcatacggaacaaggaaagatttgttaaaaggagaggacgtcttctggggcctaatttatctactctcaaggccatagagattttgactggctgctacatcttagttcagggaaacactgctgctgctatgggttactggaagggattgaaacaagttgtgagggttgtggaggactgcataaagaatgtcaagcatcctgtgtaccacatcaaggaactcctaattaaacgtgagctggtcaaaaatcctgcgctagcccatgaaagctgggacaagtttctcccgaaatttaagaagaaaaatgtcaagcaaaagaaaccgttaaccaaggagaagaaacaatacacaccctttccacctcctcagcaacctagcaagattgaccttgaacttgagagtggtgagtgtttcatgagtgacaaaaagaagtcagcaaaggaatggcaagagaagctggaaaagcaatcgcagaaagctgaagagaacaaaagaaagagagaagctgcatttgttcatccaaatgaggacattgcaactccgtatgaatctgccaagtccatcatcaacaatggcgaaattgctgatatggcaaagtccttaaagaagaaagcaaaggaattaagaaagaatgaagaacaggaaaatggatcagcacacgtccaggagcaggaagcggtcgaacgctgcatgcacgtatcggcgattgaccaggagaattctgttagacgtggtgatgatatcctgatattcgtgatgatacctacagttatcagttatgatgcttgtcaggtaccaggtaccgatgaagattcagcggtgaccagtgatgataccttacgtatccgtgattaa</cdnaseq>

Protein Sequence

<aaseq>MASEGDASALVAAAEGRKPRHKGKHDKPKPWDDDPNIDHWKIEE FDPSWNEGGMLEVTSFSTLFPQYRGKSPHPTPPSALSWFLPRSAIDWFCLVVKKYLQE AWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPYIIIKANELIKLLSRSVPAPQA IKILNDEMSCAIIKIGSIIRNKERFVKRRGRLLGPNLSTLKAIEILTGCYILVQGNTA AAMGYWKGLKQVVRVVEDCIKNVKHPVYHIKELLIKRELVKNPALAHESWDKFLPKFK KKNVKQKKPLTKEKKQYTPFPPPQQPSKIDLELESGECFMSDKKKSAKEWQEKLEKQS QKAEENKRKREAAFVHPNEDIATPYESAKSIINNGEIADMAKSLKKKAKELRKNEEQE NGSAHVQEQEAVERCMHVSAIDQENSVRRGDDILIFVMIPTVISYDACQVPGTDEDSA VTSDDTLRIRD</aaseq>

Gene Sequence

<dnaseqindica>1..289#353..429#516..626#821..889#1527..1583#1691..1729#1834..1938#2035..2117#2210..2291#2637..2780#2864..2944#3043..3084#3545..3630#5407..5527#atggcgtcggagggcgatgcgagtgccctggtggcggcggcggaggggaggaagccccgtcacaaggggaagcacgacaagccgaagccgtgggacgatgaccccaacattgaccactggaagatcgaggagttcgacccctcctggaacgagggcggcatgctcgaagtcacctccttctccacgctcttcccccagtaccgaggcaagtcacctcaccccacacccccatccgcgctctcctggtttcttccgcgatcggcgatcgattggttttgcctggttgttagtggggcgaaatcgaagtccatatgatgtttggattgacgaggtttttcttgttcggatgcagagaagtacctgcaggaggcgtggccgattgtgaaaggcgcactgaaggagtttggggtcgcttgcgagctcaatctggtagacggtcaatgattagacctgtttggtgaggtctccagttcattctgtggtaaagatttgagacatctcttgatgttgtgcaggtggagggatctatgaccgtttcaaccacaaggaagaccaaggatccctacatcatcattaaggccaatgaactgataaaattgctatcgaggagtgtccctgctcctcaggtattattctctttgtatccactgcactgagtcctttaggttataagaaaatgttgttgaaaatgtgagagctaacttagatctctattcagtatactatgccattcccgcatgctactaatattgtgtttctcacccattgattgctttgtgtgagacttgtttcctcgctaagcctctactgaattttgcaggcaattaaaatactcaatgatgagatgagctgtgctattattaagattggtagtatcatacggaacaaggtagacttcctctcatggtttaacatcaatttgccttctaatactaactatgaccaagtcatggttcctactgtaaacttctgtctgttgtcagttgcaaatatccccactcaacatagcctgtaaagactagcttttgttagtcatgaaacacaagtgcataagggtgttggagaaccttctcaactcaatcgctgtttcgaaatagcaacagcatgttactgaatgattcgcacgatgcaatttgtcaagagggtcaccttgtagtttgtagcattgtattttcatattaggactccgttccttgacacaacatctagctattatgatgtttatggatttgctagttatataaaaaatacatgatctgaagccctgcatcacatattcacatcataggttctgtgctaacttgtctgtattgtcttgcaaatacaaaaatgcaaactggtctgaggagctacaacctaggtttctttaattagtctgatttaacttaatgtgtaattttttacatgcttatagcgtgtcgtctagtaaacaacataatcatcgtctcttcatgctattttgttgatcactctgtcttgctgaatttagtttactctacagcctgctaataatgtgccatctgtaggaaagatttgttaaaaggagaggacgtcttctggggcctaatttatctactctcaaggtaaacttcttgtcatatgttcaattttgatatatctcattattggaaggttaaaaaagttaaagaaaaaacattcctttgtttacgtactgttttatgtactgcaggccatagagattttgactggctgctacatcttagttcaggttttccaacttttttattttatgtgctaattgtgggatatcctttttactctatacgtcaaaggatttgactactattgttatgctgttttcatcattaaaagggaaacactgctgctgctatgggttactggaagggattgaaacaagttgtgagggttgtggaggactgcataaagaatgtcaagcatcctgtgtaccacatcaaggtggctggtttcgtttctcagatgtttgattgaaggatgttcctacagaactattgttgattagtgattacttacaattgttatttatctacataggaactcctaattaaacgtgagctggtcaaaaatcctgcgctagcccatgaaagctgggacaagtttctcccgaaatttaagaagtaaggaacttgcatcctcttcattaagggggttagtgcccctgataattatttcacatgtcttgtacatcattatttttgcttttcctcaggaaaaatgtcaagcaaaagaaaccgttaaccaaggagaagaaacaatacacaccctttccacctcctcagcaacctagcaaggtgaagtaattgcttttatttaaacttgtttgtagtgtcattcttgtactgtttgttgtactggttttcaccagcttatgagttgcggtgattagcagtccatggattcctgcaacttacgtatttatgcatgttgctcccctcacatcattgtatttgtatagaagatactagcatttcatattttgctacatgataatttggagaaaacagcatccatgggctatgtatttttttcccatattatctgatgatatggtgtagtgcaaatgtagcttctgctggatattttcttttgtgtattgcaataccattttactgaacttttcatcctgggtgttgtagattgaccttgaacttgagagtggtgagtgtttcatgagtgacaaaaagaagtcagcaaaggaatggcaagagaagctggaaaagcaatcgcagaaagctgaagagaacaaaagaaagagagaagctgcatttgttcatccaaatgttagatatttgtgtttgtcaatttgtgtattctcaggattatcttcctaattttacttctaaataataacaatttgtttcaggaggacattgcaactccgtatgaatctgccaagtccatcatcaacaatggcgaaattgctgatatggcaaagtccttaaaggtaaacattgttttgtgcttattaatttcttcggagtgtagcttgtttactgtaactagaatggtcatctcataattgtgaatctgctcgctttgcagaagaaagcaaaggaattaagaaagaatgaagaacaggaaaatgtgagactcgagtcttatgttgcaagtaatgaaggatcacgcccaaaaaagaagcacaaattgtccaagtattcgcaacctgaatgaaccataaccccctgttagtgcgataactttattctattcgtatcatgcccattagcttctcattcgaagtttaggatggcgactgaagttggaaaaacaaaatttgtgccttttggctgtctgctgcttgtaaaagtagctctgatctattagaagtataatcttgttgttttagtttcagcatgtttatttgtatggtagtagctgagtagaagtcacatgtgtgtgttgcatggcgtgagtgctagcttagtggttgtgctgcatggcttagtgagtagagagattggcagtgagtagtggctgatcgtgctgccaggaggtgagagtacatctagctaattagttagccatgcatgcaaatgtggtgaagggatcagcacacgtccaggagcaggaagcggtcgaacgctgcatgcacgtatcggcgattgaccaggagaattctgttagacgtgggtgagtttattatctaggattcttgcatttctttaggcttaagcaggtaatgtgcatctttaaaaagagatcaatgtaatcagtttcagtgtgaggaaaaaacagaaaagagtgctacgcacttgcaaactctctgtctctccatcttctaaagttcttgtgagattgagtgagtgaatagctttgatttccaacatgatctgcctgggttgtgtaactgtttgtgcgcaactgatatcaggcgtcaaactccatcataggaacatatgagcacaattttggcataccctattactactgtcagtctgtcactaccttttggttatacatcaggaacatcttggactagacatatctatatgctagtaatgcctctaacactgacatgtgggctcctcaatgttgggtaaaactcttgctccctaattcaaatgctctcaatctccaatccccagtcggacctttgattttgtggtaacgcacgagcaaatcagctagttttcctcatataattcatcacagttgtacgaggatgaggagcatatgctgctttcttgctgtgtatttcattcccccggatcgttaattacatgagatcctattttaggacgcctctccgtatacaattgtagaaaaaagagtaaaatgcaccagcggtccttaaacttgtcaagaggtttcatttaggtctacgaacttgcaaagagcacatcgaggtccctaaacttggtttattatatcatcccagtccaaagccgcgtttgaccgtggtcttgcctacgtggcacgccacgtggacgatgacatggaattttttttattttttctcccttctcccttcttttttctctttcttccttgtctaaaagacgaaaatgcctcgtacacatcatcgtccgtgtcatcgtcttttcataaaagagaaaaaagaaggaagaagggagaaaaaaataaaaaaaatttcatgtcatcgtccacgtggcgtgccacgtaggcaaaaccacggtcaaaagtagctttggacctggatgatatgtgtgctttgcaagttcgtggacctaagtgaaatctcctaacaagtttaaggaccgctggtgcattttactctagaaaaaatatgaatagtttgcaagcaaatatatacttcctttgccctaaaataactttatttctagcatatgcaccatttatcttaaaaataagtttacttctatccctttacttatcatccgcaagtcgatgagttttattccttaatattcattacctaccatacacatataatcactcataaatactgtttttttctattaatgtcttttctccaccttgttttgaacacccaagactagatatggagttatttcaggatagagggagtaaaatattttttttaccatgacaccaataattagcatagtgctattgtattgcattgttttgtaacttaaaaaaaagtacaggattgaggtaaacaactaatataaaagtgctttcgaaaatgtgcccgccctatattcttaggaaaaataaagccttaaatttttaaagtgcgtgaagtcagtccttctgttctttctacccgatgagcgctttgcctgtgttagcttatttggctgcatgcatcggttgagtcaggctagtctagccttgggtcgagccttgtgctctagtgagttgggtactaattatatatcataggcttaatacatatgtgcattacaacaatacatttgcatatcaagaattagtgatgacatctttgtatggtgccagtgatgatatcctgatattcgtgatgatacctacagttatcagttatgatgcttgtcaggtaccaggtaccgatgaagattcagcggtgaccagtgatgataccttacgtatccgtgattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0713700, RefSeq:Os01g0713700