Os01g0716400
| Gene Name |
Os01g0716400 |
|---|---|
| Description |
Violaxanthin de-epoxidase family protein |
| Version |
NM_001050605.1 GI:115439580 GeneID:4325583 |
| Length |
2915 bp |
| Definition |
Oryza sativa Japonica Group Os01g0716400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:31572668..31575582 |
| Sequence Coding Region |
31572693..31572989,31574036..31575334 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:31572668..31575582 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:31572668..31575582 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcagccacgcccaccacgtccgcctccgcggcggccaccactcgcctcttcctacctactcgccgccacctccatgaaaccgcttccgtgcctgccccttcgcgcaccatcgcccgccgctactccggcggcgtccgctctctcgggccaccgcgcgccgccgcgggcgagcttggcggcggggccggcggaaccatcaccgggaagggcgccgtccgcatagtctccatagtaggcgacgggagcatcagcccgctgaaggacacgccatgggaggaggttatgcgccacacggctaataggatgaagtgggttgacgaaggatttgaaatgcttgtcttcacagacaagtcaattggccatgatgaacttaggaaagagctggcacagtgtgatatgctagtcaatgttgcaataacgagtcaggagactgttcagtggcttataaataacagtgaggacattcccaatataatctgctttcaatcatctccaaccttagaaaacaagttaggtggcaggtatgttcaatacactggacgtcaggacatgttttgcaagctaacaaatattggagaaacaggtggcatgaaggaatctgctgaagtccttaaggctgtatctaatgcctgggaaaggcataattcagatgacattagattttgcttacttgttgtggttaatgcgtacataagacctgttgatatgctgcaaaaccttagggcaaaaggtctgtctaccctaagctgtatgataagaaattgtggtcctcagatactgaattgtctgttcgatcccaactgtaggaaagcccttcagtgtttaaattcatgttctccaactgatcaagtttgcaactatcgctgcattgcgtcgtatgagagtccgcatctggaggccttttctttatgtgttttgcagaagaacaattgtcttgatctcaatgccgagatccccagtaagccctctgtacccccactaaccatgttcagagaacaaatgctaagccatgaacttgcagaagacatgtttgttggatggttggacaacttggaatggagttggagagttgtagctggacaaaatccagcatatgatcaattcccatgtcagtatcaattattttacaggggaaaagctaaaggttcattttggtatgagccaatttttcaagtcagaaccctggaaggggaactggtttggaggcgcagaaagtaccgagtaagaagagctctcatccctggtacattttacttcagtgtgctggataatggtgtggtttcaaaggagttttggacaatcgttgatgtttcagatgatttcagctggggtctgttccattatcacggagccgctcaggccgctggactagcatacactggagcagtgctcgttagcccagatggctcttgtccagatttggatgacccaagactggcatctgctttagataagtgtgggatcaagaagtgggagctttatatggttgataactgttcctgcactggtgcacctttgggaactcctggagatgcaaagctgcattatcagattgctcctggaaaagaatcaggtattttgcagacagggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAATPTTSASAAATTRLFLPTRRHLHETASVPAPSRTIARRYSG GVRSLGPPRAAAGELGGGAGGTITGKGAVRIVSIVGDGSISPLKDTPWEEVMRHTANR MKWVDEGFEMLVFTDKSIGHDELRKELAQCDMLVNVAITSQETVQWLINNSEDIPNII CFQSSPTLENKLGGRYVQYTGRQDMFCKLTNIGETGGMKESAEVLKAVSNAWERHNSD DIRFCLLVVVNAYIRPVDMLQNLRAKGLSTLSCMIRNCGPQILNCLFDPNCRKALQCL NSCSPTDQVCNYRCIASYESPHLEAFSLCVLQKNNCLDLNAEIPSKPSVPPLTMFREQ MLSHELAEDMFVGWLDNLEWSWRVVAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPIFQ VRTLEGELVWRRRKYRVRRALIPGTFYFSVLDNGVVSKEFWTIVDVSDDFSWGLFHYH GAAQAAGLAYTGAVLVSPDGSCPDLDDPRLASALDKCGIKKWELYMVDNCSCTGAPLG TPGDAKLHYQIAPGKESGILQTG</aaseq> |
| Gene Sequence |
<dnaseqindica>26..322#1369..2667#gtccacctcctcttcccagactcccatggcagccacgcccaccacgtccgcctccgcggcggccaccactcgcctcttcctacctactcgccgccacctccatgaaaccgcttccgtgcctgccccttcgcgcaccatcgcccgccgctactccggcggcgtccgctctctcgggccaccgcgcgccgccgcgggcgagcttggcggcggggccggcggaaccatcaccgggaagggcgccgtccgcatagtctccatagtaggcgacgggagcatcagcccgctgaaggacacgccatgggaggaggttatgcgccacacggtatgcttccgctctgagctctgaacctagcaccgattcaccgctatcaaatgctagtgcggagtcgcagtgcaaaggagaactcgacagtattgcaataagccgattcggaatatgctgataactgaagaacttctatagatagaatgttgtaacggcaaagcacatgcaaatacgcgattggtcaattgcacactcacacagaaccatttcgcacgctcacttggagaactagttgtagaagtattcaagtatatgtgattatatgggcacgaacattctaaatttctggtacctccaaaatgtgttagtacttagtacttgattataattttgtatcgcttattttaccttgttttagtacttgattataattttgtatcgcttattttaccttgtttgccttgtgatttaataaacctatcgatgccacaatcttagattctgtaagatgtgacgctatacaatgcaagtgtggaatttctgttcaagttttgtggattgatatgtccatatatgataccatggtttgtgtaggatttacataatttccataatacaattgtgtgtcatacctgtgggcttatgaaaaggggcatgtgcgtggaatcacccaaaaaaaatccgcacatatatttcagtctttcctggccatcatttatttagtgatagtgtacaaaactgcaacccttgcagagccattcatgggaaatatgttgtaagttggtttcctttgttttcccatttgtggtcttgtggatgacgatcaaacccaagatgccactcatgtgaactcaatctaatatagtagtatcatcgaaattgtttaactttttgttttttgagttagcatgcacataaggaaaaacatgtagagtccaagcttatttgtgcatctgaggattacaagatgacacatttgttcattcagaaagcaagaaacaggtcctctgatttattgtcgtacttaatatgaatatgcagaatatctctctgcataaatttactgccagtaaccatgcatctcgttttttctgtctttttaggctaataggatgaagtgggttgacgaaggatttgaaatgcttgtcttcacagacaagtcaattggccatgatgaacttaggaaagagctggcacagtgtgatatgctagtcaatgttgcaataacgagtcaggagactgttcagtggcttataaataacagtgaggacattcccaatataatctgctttcaatcatctccaaccttagaaaacaagttaggtggcaggtatgttcaatacactggacgtcaggacatgttttgcaagctaacaaatattggagaaacaggtggcatgaaggaatctgctgaagtccttaaggctgtatctaatgcctgggaaaggcataattcagatgacattagattttgcttacttgttgtggttaatgcgtacataagacctgttgatatgctgcaaaaccttagggcaaaaggtctgtctaccctaagctgtatgataagaaattgtggtcctcagatactgaattgtctgttcgatcccaactgtaggaaagcccttcagtgtttaaattcatgttctccaactgatcaagtttgcaactatcgctgcattgcgtcgtatgagagtccgcatctggaggccttttctttatgtgttttgcagaagaacaattgtcttgatctcaatgccgagatccccagtaagccctctgtacccccactaaccatgttcagagaacaaatgctaagccatgaacttgcagaagacatgtttgttggatggttggacaacttggaatggagttggagagttgtagctggacaaaatccagcatatgatcaattcccatgtcagtatcaattattttacaggggaaaagctaaaggttcattttggtatgagccaatttttcaagtcagaaccctggaaggggaactggtttggaggcgcagaaagtaccgagtaagaagagctctcatccctggtacattttacttcagtgtgctggataatggtgtggtttcaaaggagttttggacaatcgttgatgtttcagatgatttcagctggggtctgttccattatcacggagccgctcaggccgctggactagcatacactggagcagtgctcgttagcccagatggctcttgtccagatttggatgacccaagactggcatctgctttagataagtgtgggatcaagaagtgggagctttatatggttgataactgttcctgcactggtgcacctttgggaactcctggagatgcaaagctgcattatcagattgctcctggaaaagaatcaggtattttgcagacagggtgatgtgttctaacggcacagaaggttcccagatgacttgcacggttgcacctctaagtcaggcagtgtggactgtggtctgtggatactgcggacttgatccagtgcaggaattgcttgcactgttgcacccactagactacaaatatgtaagaataacattcaggtatcgctgaaaagagtaattatgtaaaatgagcggttctttatcttatatagttatcatctaatgtcatgccttttttactgtc</dnaseqindica> |
| External Link(s) |
