Os01g0719300

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0719300| Description = Similar to Sulfate transporter 3.1 (AST12) (AtST1)| Version = NM_001050618.1 GI:115439606 GeneID:4324697| Length = 6...")
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Gene Name

Os01g0719300

Description

Similar to Sulfate transporter 3.1 (AST12) (AtST1)

Version

NM_001050618.1 GI:115439606 GeneID:4324697

Length

6165 bp

Definition

Oryza sativa Japonica Group Os01g0719300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31743756..31749920

Sequence Coding Region

31744125..31744515,31744612..31744819,31744961..31745132,31747056..31747121,31747246..31747359
,31747468..31747584,31747685..31747811,31747905..31748191,31748289..31748479
,31748569..31748651,31748763..31748839,31749317..31749484

Expression

GEO Profiles:Os01g0719300

Genome Context

<gbrowseImage1> name=NC_008394:31743756..31749920 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31743756..31749920 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacggaggccggcgacgtcgacggccgcaaccaccggcccggccgcgggtcgtccgcgtcgtcgcgccacctgcacggcgtgggaggcgcctcggcggcggaggtgaacctgtccgggcgccgcccgttcgcggagaagctgtggtcggacctcgcggagacgttcttccccgacgacccgttccgcgggttcggcgcgctgcccccggccaggcgcgcgtggtgcgcggtcaagtacttcgtcccggcgctggactgggtcccgcgctacggcctcgacaagttcaagttcgacctcctcgccggcatcaccatcgccagcctcgccatcccgcagggcatcagctacgcccgcctcgccaacctccctccaatcatcggcctctattcgagcttcgtgccgccgttgatgtacgcggtgttcgggagctccaacaacctggcggtggggacggtggcggcggcgtcgctgctgctggcgtccatcatcgagacggaggtggcggcggacgagaacccgcagctgtacctgcagctcttctacaccgccgccttcttcaccggcctcttccagaccgcgctaggcgtctttaggttagggctaatagtggatttcctctcgcggtcgacgatcaccgggttcatgggcggcacggcgatgatcatcatactgcagcagttcaagggcctcctggggatgaagcacttcaccaccaagacagacatcatctccgtcctgcactccacctaccattaccggcacgagtggaaatggcagagtgcagttctcggcatatgcttcctcttgttcttgatgtcgagtaagcacctgagaaagaaactgccaaagttgttctgggtgtcggccattgcgccattcatggttgtcgtcatcggaggcatcttcgctttccttgtcaagggtgacgagcatggaattccgatagtcggtaacctgaataaagggatcaatcccctgtccattgcgcagctaacgttccagtccaggcacatgaagacggcagtgaaagctggtctcttgtctgggatcctagcactggcagaaggaatagccgtcggccgaagcttggcgatggtcaagaacgagcagatcgacggcaacaaggagatgatcgcgtttggtatcatgaacatcgccggttctttcacctcctgctacctcacgacagggccgttctcaaagtcggcggtgaacttccacgccgggtgcaagacgccgatgtcgaacgtggtgatgtcggtgtgcatcatgctggtgctgctgttcctggcacccctcttcaagtacaccccgctggtggcgctctcctccatcatcgtcgtcgccatgatcgggctcgtcaaggtcaaggagttctgccacctctacaaggtcgacaagttcgacttctgcatctgcatggtcgccttcctcggcgtcgtcttcttcaccatggtcgcaggcctcagcgcatccgtaggcttgtcagttgtcagggcgttgctgtacgtggccaggcctgccacctgcaagctcgggaacatagcagggagcgagaccttccgcgacgtgaagcaatacccccaagcgaagagcatccctggcatcctcgtcttgcagctcggctctcccatctacttcgtcaatgcgggttacctgcgagaaaggattttgagatgggtggaagatgaggataacctgtgcaagagcgtcgggcacgatctgcaatacttggttcttgatcttggtggtgtcacttctgtcgacaactctggagttgggatgctactagaagtacacaagagcctcgaacgaagagggatcacgatagctctgacgaatccgaggctagaggtaacagagaagctggtgctgtctggatacgtcagggacatcttaggggatgagtgggtcttcctgacggtcaaggacgccatcacggcgtgtcgatacgcgctgcagatatccagaaataagggagaagacgaagtatag</cdnaseq>

Protein Sequence

<aaseq>MGTEAGDVDGRNHRPGRGSSASSRHLHGVGGASAAEVNLSGRRP FAEKLWSDLAETFFPDDPFRGFGALPPARRAWCAVKYFVPALDWVPRYGLDKFKFDLL AGITIASLAIPQGISYARLANLPPIIGLYSSFVPPLMYAVFGSSNNLAVGTVAAASLL LASIIETEVAADENPQLYLQLFYTAAFFTGLFQTALGVFRLGLIVDFLSRSTITGFMG GTAMIIILQQFKGLLGMKHFTTKTDIISVLHSTYHYRHEWKWQSAVLGICFLLFLMSS KHLRKKLPKLFWVSAIAPFMVVVIGGIFAFLVKGDEHGIPIVGNLNKGINPLSIAQLT FQSRHMKTAVKAGLLSGILALAEGIAVGRSLAMVKNEQIDGNKEMIAFGIMNIAGSFT SCYLTTGPFSKSAVNFHAGCKTPMSNVVMSVCIMLVLLFLAPLFKYTPLVALSSIIVV AMIGLVKVKEFCHLYKVDKFDFCICMVAFLGVVFFTMVAGLSASVGLSVVRALLYVAR PATCKLGNIAGSETFRDVKQYPQAKSIPGILVLQLGSPIYFVNAGYLRERILRWVEDE DNLCKSVGHDLQYLVLDLGGVTSVDNSGVGMLLEVHKSLERRGITIALTNPRLEVTEK LVLSGYVRDILGDEWVFLTVKDAITACRYALQISRNKGEDEV</aaseq>

Gene Sequence

<dnaseqindica>370..760#857..1064#1206..1377#3301..3366#3491..3604#3713..3829#3930..4056#4150..4436#4534..4724#4814..4896#5008..5084#5562..5729#gagcacacgctgcacgtaatcgcgaacgcgcgacatgtacgcacagccaccgccattcggtgctcgcgcgtaatacttaattaaccctcacactactgtagccactgctcgctctgcactctctctctgtctgcatgcaaagccataattaggagccaatgaaatagcagtcaccgagtcgatcagagcaaaacgctctcgactcgatcgcgcgcgcgcggttggcggttcccttcctccgctccgctcctctccatcatcgtcgtctctgtgtgtgtctgtgtgtgtgtgtgtgtgtggcagtagcagccagatctcggccccggccccggcggatcgagagaccgatcgcgtaccccacccatccacatggggacggaggccggcgacgtcgacggccgcaaccaccggcccggccgcgggtcgtccgcgtcgtcgcgccacctgcacggcgtgggaggcgcctcggcggcggaggtgaacctgtccgggcgccgcccgttcgcggagaagctgtggtcggacctcgcggagacgttcttccccgacgacccgttccgcgggttcggcgcgctgcccccggccaggcgcgcgtggtgcgcggtcaagtacttcgtcccggcgctggactgggtcccgcgctacggcctcgacaagttcaagttcgacctcctcgccggcatcaccatcgccagcctcgccatcccgcagggcatcagctacgcccgcctcgccaacctccctccaatcatcggcctctgtacgtgtactgcgcgctcggatttattactaatgcgtttctgtatgcgcacgcacacccgatgaattaattggtttttttttttggggttgccagattcgagcttcgtgccgccgttgatgtacgcggtgttcgggagctccaacaacctggcggtggggacggtggcggcggcgtcgctgctgctggcgtccatcatcgagacggaggtggcggcggacgagaacccgcagctgtacctgcagctcttctacaccgccgccttcttcaccggcctcttccagaccgcgctaggcgtctttaggtaaaaataaaaaaaattaaaatcaaaccccaaactaatcgcacttccatcatctctcttcactaattcatcactcgttaacccggcctgacgtttttaattaacctgttattactattacgttacacttggcctgtgaaggttagggctaatagtggatttcctctcgcggtcgacgatcaccgggttcatgggcggcacggcgatgatcatcatactgcagcagttcaagggcctcctggggatgaagcacttcaccaccaagacagacatcatctccgtcctgcactccacctaccattaccggcacgaggtgcaatgcgaattaccagttcaatttcatcacgtaatttaaatctctccgtgattagtactagtaatgacttcactaagacctatttttttaaaaaaaataaacaaaaaacaattcacttcactagtaggaggaaataaagaaaagttgggtcgttcttttgcttctccatacttctacttctcccgtgttttctggacgtatttttggagttttttcttaagaattttaacggcgattgttcctcgctgtcctggatgtgtaaccgctataaatagcatgcagccgcacgtttcgagagggataaactgcgaagtagttgagtatttccgaattccgagggtgttgttgtaacctctcctgtaaacttctccgagaaataaccgcgactagcgtaaggaatctcgactggattgcagctaggactttctcgattagtatatcggctggattcgtgtcgagtcgttaacaacttcagatcaaaacaaggtttgcatcgatgatgcgtacgtgcaaacaaacaataatactatttgggtgtcgctggatcttgtctttttaagaaaagaccaatcattgttgggcctacagtttgtgcgctggaccggttgcgtgcaccgaggaaatgctcgggattgtttttgacgggaaactatttaaaatctatctcaagggtcgtccttttcatctatttaggcattgtttagtttgcgagataaaaagttttggcgtgtcatatcggatatacggacatatatttaaagtatctttttttggcgtgtcatattggatatacggacacacatttaaaatattaaatatagattaataacaaaacaaattacatatttcgcctgaaaactgcgagatgaagttattaagcctaattaatccatcgttagtaaatgtttactgtagcaccatattgtcaaatcatggagcaattagacttaaaatattcatatcacattttgcacgcaatctgtataattattttttttatactagaaaaaatacccgtgcgttgcaacgggtgaattctattttaatcttattattattatatggtttagttaagatgaaattcactgtgagagttcacttggatatatatatttttataaaatcatgagttgcagttaggagtccgatcatctcaagttagcatgcaagtttttttaaaaaaaacagaatttttatataatttcttatgtattatcaaaagtgaacgattttaaaaaccgactcaaataaggatatgtattaacaaaagcaaacgaacttaaaaaccgactcatacacggatgacgtatcaaaataccagcaaaaacatctttaatttttataatagtagagatttaatactccatgcatatgtcgaaacattcgatctgatagtgtaaaaagtttttgttggagaactaaatagtgccttacatgtcacttaaataattatatttttttataaatttaataagatacattaatatatgatagatcaatccacaattaaactttaatttctacatgttttgttagtatatgttaactagctgtagtttaatttatttttttaacttgtagaagttgaattttaaattatatatttattaagtgatatatcgcatgttaatccactctctttctgttgtacagcccgtagctttctgaagattttttttaccagcattatatggccagtacattggtaatactggtacatgccatgttgaccttggtcaatgtcatgtgaggaatggtacatgccattgcgatttttcagaaacaccagacgtgtagcacactagcatatgttcctttttttttctttgtaatcgcgggtaaatgatttcagagtggaaaaattgcaggaataagattctgaactgaaccttttgtttatgtttttttttaactctgcagtggaaatggcagagtgcagttctcggcatatgcttcctcttgttcttgatgtcgagtaagcacctggtaagtgggggaatcaggagactgatgaatctagccaaacaactgtacccatacgctaagctactgcttctttatagaatgaccgttttatattcatataagttttgtttctccaaaacttcagagaaagaaactgccaaagttgttctgggtgtcggccattgcgccattcatggttgtcgtcatcggaggcatcttcgctttccttgtcaagggtgacgagcatggaattccgatagtaagtcagtcgtccatgccaagacgattcaagcttcagagaaacatcaatatttttttttctgttttcctgacaacatgcgctaaaacgctgcttaacttgggacaggtcggtaacctgaataaagggatcaatcccctgtccattgcgcagctaacgttccagtccaggcacatgaagacggcagtgaaagctggtctcttgtctgggatcctagcactggcagtacgaacatgatcttgactcaaactccctcatcaatcacttaaactttacactctaattcaccggagtttctgatcggcggccatcgatgcttctccaggaaggaatagccgtcggccgaagcttggcgatggtcaagaacgagcagatcgacggcaacaaggagatgatcgcgtttggtatcatgaacatcgccggttctttcacctcctgctacctcacgacaggtataaatcttggcctctgcgacctttgttcagaaaaccagaaccatgatacattttgcaacattttgtctgacgatgtgctgcttgtttcagggccgttctcaaagtcggcggtgaacttccacgccgggtgcaagacgccgatgtcgaacgtggtgatgtcggtgtgcatcatgctggtgctgctgttcctggcacccctcttcaagtacaccccgctggtggcgctctcctccatcatcgtcgtcgccatgatcgggctcgtcaaggtcaaggagttctgccacctctacaaggtcgacaagttcgacttctgcatctgcatggtcgccttcctcggcgtcgtcttcttcaccatggtcgcaggcctcagcgcatccgtgagcatcgccaacttaaaccttgattagatactactccgtagcacatttctctgcacgatgctgatgtgctccccttggctgtgcatttttgcaggtaggcttgtcagttgtcagggcgttgctgtacgtggccaggcctgccacctgcaagctcgggaacatagcagggagcgagaccttccgcgacgtgaagcaatacccccaagcgaagagcatccctggcatcctcgtcttgcagctcggctctcccatctacttcgtcaatgcgggttacctgcgagaaaggtgacagcaatgcaggacgctgaagatcatcgctgatcattttttttctctctcgattggatgctaatttaacttaccctgccttgcaggattttgagatgggtggaagatgaggataacctgtgcaagagcgtcgggcacgatctgcaatacttggttcttgatcttggtggtatgactgtctgaatcttcgccctcttccatttcagcgtagcgactctcatcctagaattcaggccactgataagtgataactaacttggcatatgtctgaacattgcaggtgtcacttctgtcgacaactctggagttgggatgctactagaagtacacaagagcctcgaacgaagagggatcacggttagctatctatcacgggaaactattctaatcccttgaggagatgttctctcgtttgcttaaaaaccatctaaacggttatgaaaaattctagaaaaatttgacaacattcatataacacatatatacaactccataaaatcttaagtccaaactcaactcacacgccaagatataaaaaagacaaagtcagcgtatgaatagtagcgtactgtttatatctaaatttgtcttttttgtttctcgatgtgtaaatcgaatttgaacttgaattttggtggactagtaggtatcattgtactctatattgtcaattttttttagaaattttcataactatttgcatcgaatttagaagaaaaaggtatacgaggggatatcctcgaggggatatcacagctcatcactcactctgaagtctgaaacttaaccgcagaatttgatctgtttttcacatgcttaatttggtcattgcagatagctctgacgaatccgaggctagaggtaacagagaagctggtgctgtctggatacgtcagggacatcttaggggatgagtgggtcttcctgacggtcaaggacgccatcacggcgtgtcgatacgcgctgcagatatccagaaataagggagaagacgaagtatagggagctctttcttgcgtagagctgtttagaaattataggtgtagacacttgggcaatgggcaggcaaggcaagcaggacgaaatgctccactatcaaagggtatgaggaagattcagaaagtaccacgagctagtaacagtttattcagtcgcatggattaagtagtacttgctagatgctttggattgttggtcgatctctgcatgttctgaattgtggagtatcatggtaatttcaggtatttgttgattaggggcaatggggaatatagtgaggaggatggaaccagtgttcgtgtatagactagtttatattctgggtttacagagaagttcatagatttgcatgtatcaggccttcagggttgcattgctcaattcagggtgaaaggcttgttcactacttgaactgctagaataataaattatttagatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0719300, RefSeq:Os01g0719300