Os10g0503500

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0503500| Description = Similar to NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME)| Version = NM_00...")
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Gene Name

Os10g0503500

Description

Similar to NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME)

Version

NM_001071533.1 GI:115482809 GeneID:4349051

Length

5425 bp

Definition

Oryza sativa Japonica Group Os10g0503500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19675797..19681221

Sequence Coding Region

19676063..19676233,19676310..19676406,19676515..19676633,19676739..19676906,19677278..19677406
,19677641..19677701,19677795..19677898,19677972..19678055,19678155..19678261
,19678370..19678475,19678639..19678752,19678883..19678948,19679518..19679590
,19679671..19679757,19679845..19679899,19679989..19680060,19680452..19680514
,19680622..19680736,19680826..19680897

Expression

GEO Profiles:Os10g0503500

Genome Context

<gbrowseImage1> name=NC_008403:19675797..19681221 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19675797..19681221 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcgtcacgcggcgcggcggtcgtcggcgcagatccggcggagcggggtcatgtcgtcgtcgtcgtcgccggcggcccccgctgccgcggccggcgccgcggtgcccggcccctgcatcgtccacaagcgcggcaccgacatcctccacgacccatggttcaacaaggacacggcgttccccatgacggagcgggatcgccttggcctccgcggcctcctcccgccgcgggtcatgtcgttcgagcagcagtacgaccgcttcataaactcgttcaggtcgctggagcacaacacccggggagagcccgacaccatcgtcgcgctggccaagtggaggatcctcaacaggctgcacgaccggaacgagacgctgtactacagagttctaattgacaatatcaaggatttcgcgccgataatatacactccgactgttgggttggtctgcgagaattacagtggcttgttcaggcgcccccgtgggatgtatttcagcgccaaggataagggggagatgatgtcgatgatttacaactggccagccgagaaggttgacatgatagttgtgactgatgggagccgtattctaggtctaggtgatcttggagttcagggcataggtatacctatcggtaaacttgatgtttatgttgccgctgctggtatcaatccacaaaaggttcttccaattatgcttgacgttggaacaaataacacaaagcttctagaagacaagctatatttaggactgaggcaacctaggctggaaggagaagaatacttgtctgttgtagatgaattcatggaagctgttcatgcacgttggccgaaagcagttgtgcagtttgaagacttccaaatgaaatgggcctttgaaactcttcagaggtatcggaaccgattttgtatgttcaatgatgacgtgcaggggacagcaggagttgctctagctggcctacttggagctgtgagagcacaaggtcgacccctctctgattttactaagcagaagatagttgtggtgggagctggaagtgctgggataggtgtgcttaatatggctaaacaggcgatgctaaggatgccagggataaacaggagcggggaagggcataatcaattctgggttctggacaaagatggacttattaccaaatccagaaagggcctggatcctgcagttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggctagtcttgttgaagtggtcaggaaagtgaagcctcatgtgcttttaggactttctggagttgggggcatatttaatgaggaggttctcaaggctatgaaagaatccgattcccctcgtcctgcaatttttgcaatgtccaacccaactactaaagccgaatgtactcctgaagatgtattcaaatatgttggagacaatgcagtatttgccagtggaagccctttcagtaatgtcactttaggcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctggtatcggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagcagctgagtgccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttccatcaatctcaagtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaagatctggccgaggggcgttgtgatgtagacgctagggacctcaagagcatgactgaggcggacacagtcgactttgtggctcggaagatgtggtaccctatttacagccccctcgtgaacgataagtga</cdnaseq>

Protein Sequence

<aaseq>MWRHAARRSSAQIRRSGVMSSSSSPAAPAAAAGAAVPGPCIVHK RGTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRG EPDTIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRR PRGMYFSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVY VAAAGINPQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHAR WPKAVVQFEDFQMKWAFETLQRYRNRFCMFNDDVQGTAGVALAGLLGAVRAQGRPLSD FTKQKIVVVGAGSAGIGVLNMAKQAMLRMPGINRSGEGHNQFWVLDKDGLITKSRKGL DPAVARYARGFGPEEVQDLHEGASLVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKES DSPRPAIFAMSNPTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANN MYLFPGIGLGALLSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHITAR VGAAVVRAAVDEDLAEGRCDVDARDLKSMTEADTVDFVARKMWYPIYSPLVNDK</aaseq>

Gene Sequence

<dnaseqindica>267..437#514..610#719..837#943..1110#1482..1610#1845..1905#1999..2102#2176..2259#2359..2465#2574..2679#2843..2956#3087..3152#3722..3794#3875..3961#4049..4103#4193..4264#4656..4718#4826..4940#5030..5101#cccgacaacgcctccaccggtaggagccgcgtcctccgcgcgcgagcgcgagttatcctcaccacccaccgctcgtcgcctccactccgatcgccgccgcgcggcaggggagggggggagggtatcctcaccgccggtgccctcaccgcggcgacccttcaaaatcccccaggacgccgggaggggatcggctccgactccgtccgagcacgcgccaccgccaccgccaccgccattgtgggccctcgatcccggggcggcgcgcgatgtggcgtcacgcggcgcggcggtcgtcggcgcagatccggcggagcggggtcatgtcgtcgtcgtcgtcgccggcggcccccgctgccgcggccggcgccgcggtgcccggcccctgcatcgtccacaagcgcggcaccgacatcctccacgacccatggttcaacaaggtacccgatctcgcgatctgcatgcctcgctctcgcgcgctggggctctcacgatttcgtttctggcacaccgcaggacacggcgttccccatgacggagcgggatcgccttggcctccgcggcctcctcccgccgcgggtcatgtcgttcgagcagcagtacgaccgcttcagtgagtctaccccgtccacttcgccgaattttcgcccgcgagatcacctgatatctgctgctttgcctaatgtggcgtgtgatgcgcttgccgcttgctgtgttgcagtaaactcgttcaggtcgctggagcacaacacccggggagagcccgacaccatcgtcgcgctggccaagtggaggatcctcaacaggctgcacgaccggaacgagacgctgtactacagagtgagcgcgctctctcgatgttgcagtggcgatggttgattcatgagctcaaggtgtttgcgtgtttgattgtctgatgcggtggtgttcgtctgtttttgccaggttctaattgacaatatcaaggatttcgcgccgataatatacactccgactgttgggttggtctgcgagaattacagtggcttgttcaggcgcccccgtgggatgtatttcagcgccaaggataagggggagatgatgtcgatgatttacaactggccagccgagaaggtacacctgagtacttgactgttatagaataacaatttatttggacaccgatgttcttactagtatatcaaagaaagagattggtcaagatcgaaattcaatcaatgagatatgaaatcaaacaaatgtgtgctgattactgtgcaaatgcttgcgattttccagagataggctgcatactgaatgctaataggcaattgtacaataatctacgcttaaaccaatagtcagctttcatccatgtcgtacaccattttatgcttgttgctatataaatatttctacaaaccattgaaacttcatgcagcataattggttccatttctgcttgtgttgaacctctgcatctgattggccgttgcttatttcaggttgacatgatagttgtgactgatgggagccgtattctaggtctaggtgatcttggagttcagggcataggtatacctatcggtaaacttgatgtttatgttgccgctgctggtatcaatccacaaaaggtttgtaatatactcttcccatctggcacagtaagagaaatgaccacgaagaaatatgtttccacacattgttccaacaagacataacagccaagagaaatgaccatgaagaaatatgtttccatacatttttccaacaagacataacagccagtagcacagaaaaaaaatcaataatatactgttatttttcatttatccttttctcaaccttttcccacttctggtatgtaggttcttccaattatgcttgacgttggaacaaataacacaaagcttctagaagacaagctatgtgcgtaagatacatcacacaacttctcaaactctttcactactttggagtaaattcctgtatcataacttaacttaccaagtatttccttagatttaggactgaggcaacctaggctggaaggagaagaatacttgtctgttgtagatgaattcatggaagctgttcatgcacgttggccgaaagcagttgtgcaggttcgtgcactttctggtaatgttttgttacctaaccaagtgatgcaccattactgaagttgtaaagttacagtttgaagacttccaaatgaaatgggcctttgaaactcttcagaggtatcggaaccgattttgtatgttcaatgatgacgtgcaggtattttgattgcctgactagctattctgtgtcttttagcatggattattgccttcccaacttcatattattgtttgttgcgcttgtcatatccaataggggacagcaggagttgctctagctggcctacttggagctgtgagagcacaaggtcgacccctctctgattttactaagcagaagatagttgtggtgggagctggaaggtatatgatatgtttgatatgcttgcatttttctatcagtttatttcatacaaggtatttcttgtcaaaagtctgtttcctccgttctaattcctctttagaatccagtgctgggataggtgtgcttaatatggctaaacaggcgatgctaaggatgccagggataaacaggagcggggaagggcataatcaattctgggttctggacaaagatgtaagctattttatgcaagaaaatatcaacttctcttttccaatatatatcttctgccatacatgtgttcaattgcaattctggggcaagctttataaagtcctgtttttacatgaataataggtttgcttcttattttccactgttatgctgtaccatgcagggacttattaccaaatccagaaagggcctggatcctgcagttgctcgctatgccagaggttttggtcctgaagaggtgcaagatctccatgagggggctagtcttgttgaagtggtataaaaataattctaggattgtttttttcccctcagctgctggagctaaaatattttattgtaacagaagattttccagtgcttctgtgcttgtgcttgaactaattcagctttatactgatcatcaggtcaggaaagtgaagcctcatgtgcttttaggactttctggagttgggggcatatttaatgaggaggtaagaatcaacaattcctaacatgttgatttcataattttaccccaaaaaaaagttgaagaatggtcctcacttataaatatgactagtcagactagggacttttcagtgcagtaaataatccatctaaaaaaagtggctcccatattagttccccgcaacttctagatgtatttcacagtaccagtaatatttatatgttcaatatagcaatagccagtacaccctttcaaatctgatgctagtgattggtagcacattgagttagaatattttctccaaccttataaaggattttgtgaggtttacattaatgggccatttctatactgttttagtttgcttcattatgatttgtgagtaaaccatggttacaagagcatcaaatatgtatttgtgttgttaggtttcaaaagttctctcctttgcaaatgtaataatattaagccggcttgttgcgaagtgctaaatcatgatcctagtggatttcatctgttagggtatactcatatgttctctcttataaatttcaacattggagtcttaactttatctttgtacctctgcaggttctcaaggctatgaaagaatccgattcccctcgtcctgcaatttttgcaatgtccaacccaactactaaaggttcctcacctcacccattaatatttacttctaggatacccaaacataaatgcctgatatttatatttttcttattacagccgaatgtactcctgaagatgtattcaaatatgttggagacaatgcagtatttgccagtggaagccctttcagtaatgtcactttaggtatgccctatttaacattctctatatcatttcattttgctagcacttttgcataagaccacttattttataatgtggttgtcccaggcaatggtagacaagggtacgctaatcaagcaaacaatatgtatctgtttcctgggtatgacaactgttatagcttaccttgaaatgcttgtttttttttccttttttatatgttattctgatggacgtttctgtataattcagtatcggtttaggagcccttctttcaggtgctcggcatattacagatggcatgctccaatcagcagctgagtggtaagttttattctgttgtttgatcggatcatattttcgcttgttgtcttgtagctctatttcttaagatctcaactgcactaacaagtacaattactgatgtccagcatattagacagtgtgacgtaaaaagcttacacgcttcagccgtactttttgacaaagtagtgttttctccaccttaaattgcacaatttctataattaatgtatcttggatggtttgtatgatttgttttttttcctggtaaattgagggtgtgtgttcacgccaaaattggaagtttggttgaaattagaacgatgtgatggaaaagttagaagtttgaagaaaaagtttggaactaaactcggcttgagctatgcatctaatctagtgatttctgacgcagccttgcgtcatacatcacagacgatgaaattcgaaaaggcatcctctttccatcaatctcaaggttagctcttccatccaacctgcgccattgcagactgataggcagcatgataccataatccaaccattccacttttgctaatcaacataccaccatgaaaaatgcagtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaagatctggccgaggggcgttgtgatgtagacgctagggacctcaagagcatgactgaggtactgcatcatacataatttcaaatccctgaagttgaattttttgccagtttggcgtctgaaatgtgtcattttacatgtgtgcacaggcggacacagtcgactttgtggctcggaagatgtggtaccctatttacagccccctcgtgaacgataagtgaagctcgatgaagtgaaaaatctgacgttgcatgaaccagatgtagcacctgaacaactatcagtcacatatttgttcagacttattttttttgttgctattttcatttagctgcgctactggagggtaattcagcagataccgatgcccacgtctatggctatgttatcacgccacgccatttttttgttctgttttgacagcttccgtcatcaaacgttgctcaatttcaagattagttgagctacataaatttacatctcgtgctttactacattctactaatatattttttttggatattgatctatcactctatccctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0503500, RefSeq:Os10g0503500