Os01g0721900

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0721900| Description = Similar to Nuclear RNA binding protein B (Fragment)| Version = NM_001050633.1 GI:115439636 GeneID:4324661| Length = ...")
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Gene Name

Os01g0721900

Description

Similar to Nuclear RNA binding protein B (Fragment)

Version

NM_001050633.1 GI:115439636 GeneID:4324661

Length

3373 bp

Definition

Oryza sativa Japonica Group Os01g0721900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31851267..31854639

Sequence Coding Region

31851498..31851695,31852009..31852065,31852151..31852309,31853227..31853365,31853451..31853835
,31854200..31854404

Expression

GEO Profiles:Os01g0721900

Genome Context

<gbrowseImage1> name=NC_008394:31851267..31854639 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31851267..31854639 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccctcaacatgttcgacatcctcggtgcggacgacaacgacgacccctcgcagctgctggccgcggccgcggccgcggcgcagaaggccgaggcgaagaaggccgccgccgccgcggcggcgcccgctgggaaggcggcccaggccgcgtcggccgccgccaagttccccaccaagcccgctccccccacccaggctgcgcgggaggcacggggtggtggtgcaccatcacgtggaggatttggccgtggtgagcgtggccgtggcagaggtggacggggatatggccagaaccgtgattttggtggagacaatgccaatggctaccagggtggttacggtggaggctatggagatggggctgttgctgctggtggagaaggtgacagggagagaggccctcgagctccattccatggaggtaggcgtggtggctaccgaaatggtgaatatggggatgattctgagaggccgccccggagaaattatgagcgccacagtggtactggccgtggttatgagatgaagcgtgatggtgcagggcgtgggaactggggaactgctactgatgaggctcttgcacaggagactgaggaagccttgaaggttgaggagagtgctcctattgctgagaaacagggtgagcaggatgatgctccaactggagagaaggataacaaggagggtgctgcaaatgaggaagaagagaaggaagaggataaggagatgactcttgaggagtttgagaaattaagggaggaaaagcggaaagctcttcttgctttcaaggctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagccactttctaccaagaaaggaaatgatgaaattttcattaagctgggttctgacaaggataagaagaaggaaaatgctgagcgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctgaagcctgcggaaggagaaaggtactatggcggccgtggtcgtggaagggggcgtggagatcgtggcggtcgtggatatggtggtggttaccaacgtggcccatattctacatctgcaccatccattgaagatcaggctcagttcccaacccttggtgggaagccgcgtgcgtga</cdnaseq>

Protein Sequence

<aaseq>MATLNMFDILGADDNDDPSQLLAAAAAAAQKAEAKKAAAAAAAP AGKAAQAASAAAKFPTKPAPPTQAAREARGGGAPSRGGFGRGERGRGRGGRGYGQNRD FGGDNANGYQGGYGGGYGDGAVAAGGEGDRERGPRAPFHGGRRGGYRNGEYGDDSERP PRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQETEEALKVEESAPIAEKQGEQ DDAPTGEKDNKEGAANEEEEKEEDKEMTLEEFEKLREEKRKALLAFKAEERKVEVDKD LQSMQPLSTKKGNDEIFIKLGSDKDKKKENAERDERAKKSVSINEFLKPAEGERYYGG RGRGRGRGDRGGRGYGGGYQRGPYSTSAPSIEDQAQFPTLGGKPRA</aaseq>

Gene Sequence

<dnaseqindica>2945..3142#2575..2631#2331..2489#1275..1413#805..1189#236..440#actcccccctccccccactactcctttcgtctccaacccctcgccgccgccgccacccaaaaccctacccttcccctccccgtattctaatggcgctgcaaccaatccggcacagctgctagcaatcgactcccatcatccgcgcgcgtcgagtagctccgtgaacctaccgcagcctctcctctctctctctctccggcgccgcccccccccccccccccccccgcgtctcgccatggcgaccctcaacatgttcgacatcctcggtgcggacgacaacgacgacccctcgcagctgctggccgcggccgcggccgcggcgcagaaggccgaggcgaagaaggccgccgccgccgcggcggcgcccgctgggaaggcggcccaggccgcgtcggccgccgccaagttccccaccaagcccgctccccccacccaggctggtgagttgtggttgccgcggagtgtttagatctgatattcgtcgtgagatgtttatactgaatgatacttagttttgtatgatgagtttttttttactatggtttagtggttgtgattggattgtatgttgctacttgctaggagattattcttgtagttctttttgctcaatcttggagttaggaacatgtcggctgtaaactttgttgctatgatctgtaaaggcgtgagctttgcattgctggaaagtagaatttattcccctcttaaaacctgctgttcgaatcttcgatcagtttttagaatttattcctgcaaacaccactggttctgatttcagcgcctgaattgtatttgtttcagcgcgggaggcacggggtggtggtgcaccatcacgtggaggatttggccgtggtgagcgtggccgtggcagaggtggacggggatatggccagaaccgtgattttggtggagacaatgccaatggctaccagggtggttacggtggaggctatggagatggggctgttgctgctggtggagaaggtgacagggagagaggccctcgagctccattccatggaggtaggcgtggtggctaccgaaatggtgaatatggggatgattctgagaggccgccccggagaaattatgagcgccacagtggtactggccgtggttatgagatgaagcgtgatggtgcagggcgtgggaactggggaactgctactgatgaggctcttgcacagtaggggaattttatctgtttatgatgcctcttgtcttggatagtgaaggcacagataactcatagtgttattcttggtatgtagggagactgaggaagccttgaaggttgaggagagtgctcctattgctgagaaacagggtgagcaggatgatgctccaactggagagaaggataacaaggagggtgctgcaaatgaggaagaagagaaggaagaggataaggtaatgattttcatctgttctctactctgtctaaattgaggaaactgcactgctattttagaggtttgctgaaataaaaaatttattcttgtgtgtctaatagtacattttggaactatttttgctacgtcacttttacgagtctattgttgttctgtgttgctggtattatttggcatgtcgccatcatattgcttactatatgatacttttctactgtcaaaatgatgcaattccatcaccctggatgtgacaagtagttgcaaattcagttggtggttgggtttacacatgagttatcaacccaagttaactactatctgcacatgcatgttcacatatcatgttaacaggattgtgctgggctgatggactgtatatttttcaactcaagcgatacttaatttcaaccacagcattcttaatcaatttgcgtgtaatacaatgggataaaagtgtttgtgtacacttttgatgtgcggtattatgggttccagaatatagacgttttatcttactacactgttttgtctatacatcttgcttgaagccaatttgctggtaatgttttgtattaacacacccagtagatgtatggtagattggtagttgtgtattatgatgtggtgatttcatcttactgtcattttttcctgtgcatttttctagaactaatttactttgctagtaatgttgctaccttattgttaccgcttatttcttgaacttggttgctatgctctatctgttcagcccatggaacaagctatatatagttacattgaaagctttgaacagctattacacttttctggttttcccagtgaatttaattgtgattattgcttctgctaatgcatttgctgtataataagatcagcactgacctcccaatgttattatattctactatctaggagatgactcttgaggagtttgagaaattaagggaggaaaagcggaaagctcttcttgctttcaaggctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagccactttctaccaagaaaggaaatgatgaaattttcattaagctggtatatttctcagtgtgctctatttcaatccctacagttgtctgattctagaatttttttttgattaaatgtaccattttcttagggttctgacaaggataagaagaaggaaaatgctgagcgcgatgagcgtgccaagaaggtattttaacttacatacgtagtaattggcagacctttacacattcttcgtaggtcagtctggatgccaaaatcttgtaaatttgaggttcttgtacacattcgttttggttgtgagtgttgggtagatggatatgataataagacatctgtttggaagaacatggggatgccttggtaaaatgactactaataaattttcaaacaagcctatggtgtaattattggatattcctagattttgcgattgatagcaactcaatttatcttggaaaaaaaaactcaggtttctaatctgttaaattttgttccagtctgtgagcatcaatgagttcctgaagcctgcggaaggagaaaggtactatggcggccgtggtcgtggaagggggcgtggagatcgtggcggtcgtggatatggtggtggttaccaacgtggcccatattctacatctgcaccatccattgaagatcaggctcagttcccaacccttggtgggaagccgcgtgcgtgaacggtctaagagcatcgcagcattgtttttactggtgtcacctttaaattttgcccgcagttgaatcatattgtcacggttaatcggaacaaataatggtgttgcctgtgccttttttccatcgtgtgttggtctactttgtataccggagttgcttgtcagaattagcctctaattttgtaggctagcttttaccattttgttaaaaatctgcattccttgcatgtttat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0721900, RefSeq:Os01g0721900