Os01g0723600

From RiceWiki
Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0723600| Description = Ribose-phosphate pyrophosphokinase 3 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3)| Version = NM_001050643...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0723600

Description

Ribose-phosphate pyrophosphokinase 3 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 3)

Version

NM_001050643.1 GI:115439656 GeneID:4324718

Length

3887 bp

Definition

Oryza sativa Japonica Group Os01g0723600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31936426..31940312

Sequence Coding Region

31936552..31936937,31937712..31938027,31938111..31938206,31938298..31938366,31938466..31938594
,31938753..31938852,31939909..31940042

Expression

GEO Profiles:Os01g0723600

Genome Context

<gbrowseImage1> name=NC_008394:31936426..31940312 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31936426..31940312 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaacggccgcctccgcctccgcctccgcctcccccgccgcggcgttcggcgccaaaacccgacgcccgggccccagccccagccccagcccgagccccgcatccgcattcgcgaggccttccccccgcgcctcggccgccggcaggctccacgcaagcctccacctcggcggcgcgagcgccacgggcagcagcatcgtcagcaacgccagcggcatccacctggcggcccccgtgctcgcgccgttggccgtgccgaagatgaccggcgccgtcggggcgcacaagaacgtcctgctcttccactgcgaggagatgcgggagctcgccgagcaggtggtcgcccggaacgacgacatcgagctgcgctccatctcatggaggacatttgccgatgggtttccaaatttattcatctcgaatgcccacacaatccgcggacaacatgttgctttcttagcatcatttagttcgccaagtgtcatatttgagcaactatcaattatatatgctctgccaaagctgtttatttcgtcattcactcttatactcccatttttccctactgggacgtctgagcggatggaagatgaaggagatgttgccacagccttcacacttgctagaattttgtcaaatataccaatatcaagaggcggtccttcaagtctagtgatctttgatattcatgctttgcaagagagattctactttggagactcagtcttgccatgttttgagagtggcattcccctactcaaaagtaggcttcaggaactacctgattctgacaatataaccatagcttttcctgatgacggtgcatggaaacggttctataagcaacttcaacatttcccaatggttgtatgcaacaaagttagagaaggggaacagagaatagtacggataaaagagggggatcctagaggccgccatgttgttatagttgatgacttggtacagtcaggtggtacattgattgaatgccagaaagtattggcagagcatggagcagcaaaggttagtgcatacgtgacacatggcattttccccaacaagtcgtgggagaaatttcagcctgataatggagagggtccgggtcatgggctaagccacttctggattactgattcatgccctctcactgtcaatgcggtcaaggacaggcagccgtttgaaattctcagtctggcaggacctattgcttctgctcttcagatttag</cdnaseq>

Protein Sequence

<aaseq>MATAASASASASPAAAFGAKTRRPGPSPSPSPSPASAFARPSPR ASAAGRLHASLHLGGASATGSSIVSNASGIHLAAPVLAPLAVPKMTGAVGAHKNVLLF HCEEMRELAEQVVARNDDIELRSISWRTFADGFPNLFISNAHTIRGQHVAFLASFSSP SVIFEQLSIIYALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIPIS RGGPSSLVIFDIHALQERFYFGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDDGA WKRFYKQLQHFPMVVCNKVREGEQRIVRIKEGDPRGRHVVIVDDLVQSGGTLIECQKV LAEHGAAKVSAYVTHGIFPNKSWEKFQPDNGEGPGHGLSHFWITDSCPLTVNAVKDRQ PFEILSLAGPIASALQI</aaseq>

Gene Sequence

<dnaseqindica>127..512#1287..1602#1686..1781#1873..1941#2041..2169#2328..2427#3484..3617#atcatctccccggcacgcgccacacgcgtatgtaacgcaacgcaccgcggggactcgcgcggctcgaccacatcagtcccaacgacccccccccccccccgggcctcggcagcggcgcgggcagggatggcaacggccgcctccgcctccgcctccgcctcccccgccgcggcgttcggcgccaaaacccgacgcccgggccccagccccagccccagcccgagccccgcatccgcattcgcgaggccttccccccgcgcctcggccgccggcaggctccacgcaagcctccacctcggcggcgcgagcgccacgggcagcagcatcgtcagcaacgccagcggcatccacctggcggcccccgtgctcgcgccgttggccgtgccgaagatgaccggcgccgtcggggcgcacaagaacgtcctgctcttccactgcgaggagatgcgggagctcgccgagcaggtggtcgcccggaacgacgacatcgagctgcgctccatctcatggaggtccgattcttacccgccctttgttactaccatctcgttgttttttttttcccctggagtccttaatgttgcgattgtttaccattaattgttgcccgaattttgcatctggccaaccaagtatctcaaccgctccttaattcgtttggtacataatgggaatctttcccgctacatggatgaaagagcgctcagtgggaaaggatatctgaactggaaggagttttcttgaatgtttcccgaatcgatacatcggcgctgaacaatttttgctttgtttcacaattagttcgtcgggattacaaagctctacctttaaccttggcccttaatggaacagggaaaggtcaatatgaaaagtgaagctatatatatctgcagctctaatatgatctggtagccgcctgttgtgttttattgggggcttgggacctgtgggaaaacacaaatttgctgcagtcagcgcactgatatttacatttttgcattcaaaatttagttccattgtactacctccattcctgattgatcagcatataagcaaaacgagtatacattatcgaaattgacttaaaggtcaatactttaattctgtcgtacctctatcaagggacctagaattggaatgataactcattaggatgttctgactggtaattttgcaggtaggaacaatctttttatttcctaaaatctatctcagagaaacttattatactttatcaaaattagtccaaacttatctcttacatttactttggtaccatttttcaggacatttgccgatgggtttccaaatttattcatctcgaatgcccacacaatccgcggacaacatgttgctttcttagcatcatttagttcgccaagtgtcatatttgagcaactatcaattatatatgctctgccaaagctgtttatttcgtcattcactcttatactcccatttttccctactgggacgtctgagcggatggaagatgaaggagatgttgccacagccttcacacttgctagaattttgtcaaatataccaatatcaagaggcggtccttcaagtctagtgatctttgatattcatgctttgcaagtaagtaaaattcttccatatcaaatgcacttgtcctttttagacggcaacatgaaaataacttgtacttaacaacatatcaggagagattctactttggagactcagtcttgccatgttttgagagtggcattcccctactcaaaagtaggcttcaggaactacctgattctgacaatgtgagttctctgactacataattaaagctttcatttttcttgacagcgttgatgaaacgtagactgatatactcctttatacttttatcagataaccatagcttttcctgatgacggtgcatggaaacggttctataagcaacttcaacatttcccaatggtagttatttttgtctgaccactttcaaatcccaacaagaaatggtgttcctatgtactgaatattgaccctctgatttcattaaacgtgtctcggtaggttgtatgcaacaaagttagagaaggggaacagagaatagtacggataaaagagggggatcctagaggccgccatgttgttatagttgatgacttggtacagtcaggtggtacattgattgaatgccaggtaattaaatttgttgataaatcatcagctcatctggtcttgtcattgaggaagtttatttcacagcagttaaccttttagtgtacttcataactgtttgtaactatgtagttctcctgtcttccttcgattgctaacttattcaattttctttccagaaagtattggcagagcatggagcagcaaaggttagtgcatacgtgacacatggcattttccccaacaagtcgtgggagaaatttcagcctgataatggaggtatgtacacaaagttttaatattagcattgtagcaagtttcttatatattttatatgattccttgttaagaattttttgaatctagaggcgttaatgcaaacaaagttgtttgtttctcatttgacacctttccgtaaattcattggaacttatatgttttccaatgaatggcatagatccctggtagagttggtaggttgaattgtttttctttgtttaataattaaccatttgttcttttaccaattcacctgcctgctactgtactttttattgatcaagtaacgttttccaatcaagagagactacccttcatcttggaaacctaggtcatatttatgtttttattaagatagcttctagtttctacctgcaaatttgccaaacttttagctgtttgtacggaataaaactttgggacatcaaatatagaccattgtaataatactgcagtgagagatgcataaggacttcttaagtgaaaaccaaatagattttcatcaaataccttaataatgcagtcactgagtcataaccctcattaatcatcatacagttttgtatgggaacatcatgcaaaaatcctactccctccgtcccaaaatataacaacttttagtcctcaggatttgtctcaaaatataacaacttctccatcaacattctcttcccaaccaatcacaaccctccaccattcacttttcccacctacctctactactcatccaatcacaaccctccaccactcacttttacctactttcttaataaccgtgtccaactttagtacttcttatattctgggaaggatggagtatttggtatttgttgatactttgctagttgcgtaggaggcttcaacttctaacacaacataaacaagaacataatcatgctctggtcgaatgttgttcttcttttctttttgagaccaatgaatttctgttttttttttgtttgtttttggctattgtagcacctatagttgttgaaaaatctgttgtttattcgactgatatagttactaactacattgtgtattgtaaaatttcagagggtccgggtcatgggctaagccacttctggattactgattcatgccctctcactgtcaatgcggtcaaggacaggcagccgtttgaaattctcagtctggcaggacctattgcttctgctcttcagatttagcaaattcactatgtttgcttggccaaccgggatattgtttagttcattcttcccccacattttcaggctcttggatttttttctctttctagaaaggatatgttcttaatgtttattgaaacctcaggtgaaaattccatgaattggttaaacggcaaggatattcataggatagtttgcttaataatctgactgaaaagaagtcaacgagtcgagctatgttctataaataaaactgtccaataaactttctgctgagttttctcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0723600, RefSeq:Os01g0723600