Os01g0727400

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Revision as of 04:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0727400| Description = Conserved hypothetical protein| Version = NM_001050657.1 GI:115439684 GeneID:4324734| Length = 3218 bp| Definition ...")
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Gene Name

Os01g0727400

Description

Conserved hypothetical protein

Version

NM_001050657.1 GI:115439684 GeneID:4324734

Length

3218 bp

Definition

Oryza sativa Japonica Group Os01g0727400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32076594..32079811

Sequence Coding Region

32076890..32076941,32077351..32077464,32078464..32078526,32078877..32078968,32079052..32079132
,32079217..32079315,32079383..32079571

Expression

GEO Profiles:Os01g0727400

Genome Context

<gbrowseImage1> name=NC_008394:32076594..32079811 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32076594..32079811 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaggctgcgggcgctgtggcaagcctccgttaacgccaccaggcgagccattgtgtggaattcagaagacctaatcccaccaagtgaaaagtacatcttcaattttaattcaaaagatgagctgaaaaggtggcacttgtattcagattccgagtatggaggtttatcatctgcatcattggagataactgatggtggtgctggtggggatacttcatcaactggtctcttttctggcaatctctctttggatatgtctgagggatcaacatggaagataaggcgtagtggtttctgtggaatgagatcaaagaagtttaatggtttcattgatcttgatgcatatgatactatagcgatgaaactcagaggggatggaagatgctacatatctactatatacacagagaactgggtgaattcacctggacaacaggaagataattcgtggcaagcctttgtgtacttaccccaggacagatggcaaatcatgaagatccctcttgattcgtatctacccacatggagaggaaatgtgatcgaagcaaagatggaaatgaaccctgctcgtgttgtgggaatgtctctatccgtaaatgctgagggcggtgtacctggtgcaaagactggaccaggtgattttaggctagaggttgattggatcaaggcattgaggacactctga</cdnaseq>

Protein Sequence

<aaseq>MSRLRALWQASVNATRRAIVWNSEDLIPPSEKYIFNFNSKDELK RWHLYSDSEYGGLSSASLEITDGGAGGDTSSTGLFSGNLSLDMSEGSTWKIRRSGFCG MRSKKFNGFIDLDAYDTIAMKLRGDGRCYISTIYTENWVNSPGQQEDNSWQAFVYLPQ DRWQIMKIPLDSYLPTWRGNVIEAKMEMNPARVVGMSLSVNAEGGVPGAKTGPGDFRL EVDWIKALRTL</aaseq>

Gene Sequence

<dnaseqindica>297..348#758..871#1871..1933#2284..2375#2459..2539#2624..2722#2790..2978#cgtgagttcgcccgccgcctgcgccgatccccatccatcccgtgagctagcagaggcgccgtcgtggtcgccgtcgttcgtcctgctgcttccgccgcatcccggtgagcatccatcagttacgcgcatcctcttgctcatctctccctacccacgcgctttttcctccaatttgaacaccctttgtttctcttctagacctggaagctcttctcttaatttgccttaaacctcaatactaatagcagtttgtttgttcccccagatccgccactgctgaacggggtgctttcgccatgtcgaggctgcgggcgctgtggcaagcctccgttaacgccaccaggcgaggtagctgcctgccgcaaacctaattttgccgcgctagtcgtatgctgggtttatttcctcaaacgaaactcctttacctgcgtttgctcatttttaaggccatttgaaatgtttactggaaaggccatatgagatcctcaaatgatgaataactatggcataaggattttagacacgggatgggaattcaagtgtgtaacagctcagtactagttatgttgatgtttattcagacagttggaggtttcttctagcattttgatttatttaaaatggatgctgctggatcgcaagttggcttcagttgttagctatgacattctaagatgcttttaatcttcatttagagtaataactcattatgtttgtctatgtcataattctttcatcctacatacgaaatttgcagccattgtgtggaattcagaagacctaatcccaccaagtgaaaagtacatcttcaattttaattcaaaagatgagctgaaaaggtggcacttgtattcagattccgagtatggaggtaatgcctcactttcaagtttttctttgcacgaatattagttttcgtgattgtcctgaataactgaacggtagaatagactaacttatattgtatatgttgtgattgtgaggtactcatggaatattcatgttctaagactttgcctggcactggaaatgttcctttgtttttattctcagaatacatgggaaaaatatgcaaattcccaagggctcaatttttatatgtatatgttacgattcaaagtttcattgtgattctaattctatgcatagaacaaaaatgaataaagctaggaaagttctctttcagagaacatcagaaaaaaaagttttctcttgaattcttgtagctcttgcagctttctaacatagttcctggatattctgacatagttactggattagtcgatcacttttagctccattcttgtcaagaggcttcactgtatacttctctcagacgatacatttcactatttcagtgtaaatattgcatgccaataactcattgatttaatgagttttcccttcgtttttcacctacatttggtcttttactttgtattaccaagaatgttccacaaagggctatatctaatacaaatatatgtggcttactatctgctatagtgatccaaatgggaatctgcctgctccttgtgctttcattccctggatgttctacaacggatacatcagtgtagtatcaattggtagttgctaaaccagtggattagatagtctgggatgtaaacctccttcaatatgatgggtagatcgttaatgcttcagtgtgttgtgatatgctggtgccttagcctcacaatagtacctggaataaacaaatgtttatttctttgtgtcttttgggtgggtgacctttctggcatgttcattaaacttcactaatatttgttggcacattttgtaactgataggcaagctctttattcacatctatggaatgatttgattgaaaggaattgttatccaggtttatcatctgcatcattggagataactgatggtggtgctggtggggatacttcatcaactggtactctgatgttttgacgtcccctttttcagggtttccttagagtgcattttcagtacaaagagggaaaactggaaaatagtttatttatctgctgttatatatagcttatgagtacaaattaacctgttgaactatggagtgtcttctagtgttgttattctcatgaatctcatatgtccttgccaacttaccagataataccagcttgctgtcttggcttttgtaattggaaagaaagcggcctttttttcatggttttgttagatttcatgcctgattcacttaatttaatttttataagctttgacagttttgcaactatttttccaacatatgcattctggaaggtctcttttctggcaatctctctttggatatgtctgagggatcaacatggaagataaggcgtagtggtttctgtggaatgagatcaaagaaggtaaagtgatattgacttggtcattgctcaatatctgtagatgctattatgctgataaacccttatttctttctccgtttcagtttaatggtttcattgatcttgatgcatatgatactatagcgatgaaactcagaggggatggaagatgctacatatctactgtatgtatcctcatcctgagacagtattgaatgtgcgatatcaagttaatacgttgctatataatctgaatcttaattaaacagatatacacagagaactgggtgaattcacctggacaacaggaagataattcgtggcaagcctttgtgtacttaccccaggacagatggcaaatcatgaaggtaatttcaattcgaagttgaaagatatggtttttgatgatacgacagcacttgtcctttctttcagatccctcttgattcgtatctacccacatggagaggaaatgtgatcgaagcaaagatggaaatgaaccctgctcgtgttgtgggaatgtctctatccgtaaatgctgagggcggtgtacctggtgcaaagactggaccaggtgattttaggctagaggttgattggatcaaggcattgaggacactctgaatttgtggtttccacaaatcggtctttttgtaggatttctcagggctggaaatttcttaccggcactttttcatgtgataattgctgaatatcacgaggcatggagatgcgtcatgcagtttgtattactcctagtcaatacaatgggacatcgaaaggaggcaactgttcagcgcagatgaataatgaggtctcttttgcttttgggggaaatgaatatacaaatgtatcacctgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0727400, RefSeq:Os01g0727400