Os01g0729100

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Revision as of 04:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0729100| Description = Protein of unknown function DUF92, transmembrane family protein| Version = NM_001050667.1 GI:115439704 GeneID:4323925...")
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Gene Name

Os01g0729100

Description

Protein of unknown function DUF92, transmembrane family protein

Version

NM_001050667.1 GI:115439704 GeneID:4323925

Length

6495 bp

Definition

Oryza sativa Japonica Group Os01g0729100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32154835..32161329

Sequence Coding Region

32154885..32155265,32156374..32156627,32156763..32156886,32157072..32157176,32161021..32161113

Expression

GEO Profiles:Os01g0729100

Genome Context

<gbrowseImage1> name=NC_008394:32154835..32161329 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32154835..32161329 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtgctctctcctgccgccgctcgctcccgtttcccctccgcctcgtctcctcctcccctcctcccgctcggctctgctccctcgcggtcctagggttgcgccccgagtccccgtttccccaccgcgcgcgctgccggacaccgctgtgggggcggcggaggcgctccgtggcgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaacctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggtttcgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggctcgtcctcgtcgcctcctacttcgtattgggcacagcagcaactaagttgaaaataaagcagaaagaagctttgggggtggcggagaaaagaggaggaaggagagggactggaagtgttattggttccagtgctgctggttgtgtctgtgctctgctatcaatctacaatgtaggcagtgcagcgttggctgagctctggagacttggcttcgttgctagttattgtactaaactaagtgacacagtttccagtgaaatagggaaggcctacggaagaacaacgtacctggtgacaacacttaaggttgttccgcgaggtacagaaggtgcgatcagtattgagggtactctagctggaattcttgcatcgataattcttgcaagtgttggttatctcctggggcaggttaatgtatcacaaggcgcagtatgtgtccttgcatcccagattgcaaatttttgtgagagttatattggtgccacactacaagataaagaaggttttgaatggctcaccaatgatgttgtcaatgtactaaatatctcaactggtggtatattggctgttctgatgcagcagttgctagtaagttggcgctcttga</cdnaseq>

Protein Sequence

<aaseq>MACSLLPPLAPVSPPPRLLLPSSRSALLPRGPRVAPRVPVSPPR ALPDTAVGAAEALRGALADAFLASPPTWRSAAVSNLAIFVAGSPVLLSGLSASGFAAA YLLGTLTWRAFGPKGLVLVASYFVLGTAATKLKIKQKEALGVAEKRGGRRGTGSVIGS SAAGCVCALLSIYNVGSAALAELWRLGFVASYCTKLSDTVSSEIGKAYGRTTYLVTTL KVVPRGTEGAISIEGTLAGILASIILASVGYLLGQVNVSQGAVCVLASQIANFCESYI GATLQDKEGFEWLTNDVVNVLNISTGGILAVLMQQLLVSWRS</aaseq>

Gene Sequence

<dnaseqindica>51..431#1540..1793#1929..2052#2238..2342#6187..6279#agtcacagtcgcggagtcggtagcatcggggcgaggacttggaggcgacaatggcgtgctctctcctgccgccgctcgctcccgtttcccctccgcctcgtctcctcctcccctcctcccgctcggctctgctccctcgcggtcctagggttgcgccccgagtccccgtttccccaccgcgcgcgctgccggacaccgctgtgggggcggcggaggcgctccgtggcgcgctcgccgacgccttcctggcgtcgcctccgacgtggaggtcggccgccgtgagcaacctcgccatcttcgtcgccggctccccggtgctcctgtctggcctctccgcctccggtttcgccgccgcgtacctcctcggcaccctcacgtggcgcgccttcgggcccaaggggctcgtcctcgtcgcctcctacttcgtattggtgagtggatccggtgctgcattgacagtttggctgttcgtagaggtggttcagtgataagtatggaattaagctacactaacgcattgtagtttgtttggagattagtgattgtgggattgttgtggtttggtgctccttattttgtagtcctagattgaacttgtaatggcctatgagaacgtgactgataattccaatgttagatccatgaactagctttgctcataggataagtaacaaaatggagtaatttgttcttttcattatgttttagatgaatcagccttttgagtggcaccaatactgtacttttgagattagaaacaaagtactgaacttttgagcgttctgaatctatatagtaggtatgagagactagtgcttcctagtaggggctccaaacaattcttgaatatggcgatggtctctcacatagtgaaagaaatgtgccagccattgtgccattctgcatgcttcttataaagaaatctgggcgtgatgatctcatctagtgggaaattaaataagtgctaaaacttcctaatttaactttgtggtactgctcaagtactcatctgctcccagagtgtgctgacgaatctatggttattggatgtatggttatatttttgggaaagcaattccccctttttcccactatgttttctaagaatgctgaggtagtccactagaaaaacacttgaattgcaatttgcacttgctaaagtaggatagagtaagtattactttctgaattgttgtaaatgcttttctatgactttaatacgcatgcggattatcctgcagtatgattttcttctagaggggactggagaatcgccaccctgtatttcagttttttaaaggttcagttgaaataaatcaagtttttgcagggtatggatgcagttgcacttgctcttgagaatcagtgaccaacctgaattaaatgatttgtgggttcattggttcatgactgaatagtgacatgacttccttaggttgcccatgctaagtgacaaaaccagctaaacaaagttcttatgtttatatatctaaagtttgggtcatagtgggtcatcagtttttaaacttttgggtgcagggcacagcagcaactaagttgaaaataaagcagaaagaagctttgggggtggcggagaaaagaggaggaaggagagggactggaagtgttattggttccagtgctgctggttgtgtctgtgctctgctatcaatctacaatgtaggcagtgcagcgttggctgagctctggagacttggcttcgttgctagttattgtactaaactaagtgacacagtttccagtgaaatagggaaggcctacggaagaacaacgtaagattcctgtcactacacagccttcaaataattcatggttccacatccataaacttgtgtatatatttgtgcactcttagtgaactcaatgaactgtacttagagctcagttttggtctttttgtagagtaggtacctggtgacaacacttaaggttgttccgcgaggtacagaaggtgcgatcagtattgagggtactctagctggaattcttgcatcgataattcttgcaagtgttggttatctcctggggcaggtaaattatttatacagtaaactttgcagaacagcagatattttggaaaacctacagatttagcactgaattgtcacagaacttatatggaaatgacagtgatcagtgaatatatagtccttaccgtttgctccaatacactcgtatgattattgaaaaaaataaaaccatgcattttatcgcaggttaatgtatcacaaggcgcagtatgtgtccttgcatcccagattgcaaatttttgtgagagttatattggtgccacactacaagataaagaaggttttgaatgggtgagtttccactttcagctgattaagtactccttttagagttttccatgtaaactgaatttgtcttttgtttgtgtcctaaattttcttcttgttgaagacagtaccttgtttcatttcctgaattagcttgcatttcaatgacgtaacattggaggcctataggttgaatgctatgatgaaaattttctaataggaccttatttcatgtatgctttaactatactagacattaccgcgcgcgttgcacgccctatcagctggctaaagaatcacaaagaaaaagctcttggaaccatcatattgttaacctcaattcacaccatcatgttctcgtccccgtcgacaatcttcagagcactcctcacgatgtcttcagggaagcccatttaaagttttaaaccaacttatgcacatgtcgtcacagtcacagataagttgtactccgtatatccaatggaataacaaatactccgtataactcggtaacaatacattttcttccataccgacggaggtactctgcaaaggcctctatccagtagcagaaaatatggaatagtcacgcaggtactgcaaaaatggattaaaacaaacattaagagcagaacacaacctcaacactgattccttaaaacttgttaattagttttgaccatgtctcgaggttaggaatttctgaatttctgattctgaatttatgactggaatttctgaattttttattctgaatttcttatactctgcatcgctttagtcacgggacagaactcaatgatttactcaccggggcccattaattatacagccaagataaggtgtagttcagattccgaactctggacctagattgaataaccaagtgactttaccaatataaaggtacactaaaacctaagttggctctctctgatccaataccttcaagaagaaatgaaaaaagaaaaggaaaaaaggcaatggaaatataaaacatgtagagtatagcatgtgcaaacacatctctaaattctagtatcatcaatggtccttacccagctccaagtgccatcattggtccacactagctctagccaccatgttttcatctctaccttttcccagcaatttgagaagctatgaaacaaacagctagagctgcaaaatttctccattacaaagcttaccagagccccgaccaattttatatcttcaatctcacctgcaagagcaccaaccagttttcagtcttcagtctccattcactgagcatgaaggaaagcatggagataatgactacatgaatacaccgtgatggatcctctatcatgcaacaaatgaccagatccagtgtggtcatcagaagaatgcaacaacgtcgacaagacttcttgaaccagatacactgctagccattgcagccacaaaccgtaagaggcagggtaaagaaaaaagtgcattcttctgagaccaaactgcctcttactcccttcttttccccttcctcttacaagtcaaattaaatgttcacatgatagaaaagaaaaaaaaggagtactttgccagcacaaagtgcattcttttaggccttagccaaaagtcaagtgagcagccagctatatatgcaaagtagcaaattagtgacaaatcaacagaaaacaaatcttaaaccaaagaaacaaatgtaactgcatccaccaacatatcctccattgtcattcatcgtgctgaaaagaatttcattaggatcaaaatctattcgaatcttgttggttggtttgtgctctcatcaattgggtttgtaaagtagttaaacaatgttgttttcttctctcttgcaagtttatcagtaaataaaaaactattaaatagaaggctctgtttctcattcaaaagataaatagattagagtccagagtctacctaaatgctacagagaaatagggaatgctcacttattagtgccattagctgattagaaatagcatgtgagcacttgagtagagtagcagtagcagtagcagaccaggacgcgaccatgcgcccgtgcactgggctgttgctagctgctgctgcgcccgcacgctgcgcgtcgacgctgcctccgcgcgtccccaccggcgacctgctgccttgcgcatgctgcgactgcgccagctgctgcaccgccgctgcgcacccgcgtccggcctgctgcaagccaccactccaagccaaaccctagccaccgccagatctgaaggtggtgcatcctcgggtcggggcagcgacgctgcgacggagtgggagaggggcgatgagacagcgggaagcagaggatggcgtgttgtggtgtgggagagatcatcgccgacgaggagaagcaagccaggtggagggaaagacgcggctgtcgcccgtcgcaaggaaagaggagagagcgagagaaggagaggggaaaggtagggaacagtggcagctagggtttcgggtggggtggggtgggtagggatttttgttttttcagaaaaacccctcacttttcgtttatcagagcgcagccctattttcccattttttccttcttcgtataatatatagtaggttgtggagggcttttacataagaatacagaacatagaaacatatagtgagggatctattacaaattatatataaaaccaaggtcttttttgaaaaatttccagctcgaaaaacctctccgccttccagcgcgcggggcgacgtggatagcgcggcgatcgaacacgtgactccaaatcgttgtgggaggttcaattgggggcaggttttaatataaccgattcatgtcctccatgctcatctttctctgttctctatcgtgtatcactagatcatttacagcataaatgagtgatggacgttttcattatatgggaccatgcaactgtcaccatgtgatttctgtctgttagagcacccgcaatggtaaagtaagttgctctctataaaacatgtacatctcagcaatagactagattaatagtaaatcaccttaatattatgtctacatcggtatctatagctctctaatgcattgcctcgtttttctctatagactatctccaggttagtagatagttttgctctctctcttcatttaatatcttccaagtaagaaaatatgttgacatggatctcttgtagagagcctatagataaccattgcgggtgcccttagtctacttattatatctacatagtggtgggtaattttttttcaccttttcagcacatgccataacagatatgccattatgtcgttcttttttctaatctgtgggtattgatattttcttagagaagtgtattttttagctggcctctacatccaaccaaatatatgtagtatttttaaattgggaacttagtccatcaaacaaaccaatatgaaatttgctcctatggagatttgaactcatgatcttggggtgctactcaggttactgcaaccactagactacgtgaccttccgctaaagaataaacattgatgcttcttgttgacaagtagatggcagaattcgctaattttatatccttggctcattgagaaaaagggcatcagaatagaaattaactccagcagcatccaagacactgaacatcactattgacttttgtttttagacatgcagtagtctggggacatttcacttattagaattctttccaatctttttcacctgaataataccaggaaacctgtctttacagtggtgtataataagctgatatttggtttgacctgtagggttcacaaaaaaaaaagaagctactatgtactttactttgtatatagagaagttttcccacaactaacattcttatgtggtcatgtgcagctcaccaatgatgttgtcaatgtactaaatatctcaactggtggtatattggctgttctgatgcagcagttgctagtaagttggcgctcttgaatacttttttatgacttcttttgttcagcctccgttattataacttattatggagaaatgactggttgatggcaatgttcttacatgctgctgccatgtgaaatggaagtataaattccggtcttagagatcatatttgagcggataaacatttgtggatgtagttatctgtgtcaatccttctggtatatccatagttcggtttcttgtactgct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0729100, RefSeq:Os01g0729100