Os10g0504600

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0504600| Description = Chorion 2 family protein| Version = NM_001071539.1 GI:115482821 GeneID:4349057| Length = 4626 bp| Definition = Oryz...")
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Gene Name

Os10g0504600

Description

Chorion 2 family protein

Version

NM_001071539.1 GI:115482821 GeneID:4349057

Length

4626 bp

Definition

Oryza sativa Japonica Group Os10g0504600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19733671..19738296

Sequence Coding Region

19733671..19733754,19733861..19734052,19734173..19734292,19734440..19734504,19734667..19734811
,19735287..19737320,19737887..19738008,19738110..19738296

Expression

GEO Profiles:Os10g0504600

Genome Context

<gbrowseImage1> name=NC_008403:19733671..19738296 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19733671..19738296 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcaagtcggcgcggtggcgcggcggcggcgggggcggggggaaggcgaaggcggtgttcaagctgcagttccacgccacgcaggtgccggaggtgggatgggaggcgatgatggtggtggtgacgccgcgggacgcgggccggccgacggcgaggacggagagcgcgcaggtcgccgacggcgcgtgccagtggcccgccccggtctacgaggccaccaagctcccttcctccggcaaggacaagatctaccagttcctcgtctacgacacgggctcgaccaaggcggcgctgctcggggaggcgacgctgaacctgtccgagtacgccgacgcgttcaagccgtggatcgtcacgctgccgctcagcggcagccccggcgcgcagctgcacgtgaccatccagcgggtggtgggtggtggtggcggcggcggcggtgggtgcggtgacgacgccagtgagaacggcggcgacgtgtcgccggtggtggcgaggacgccgccgaggaagacgctgcagagccagctgagccggtgcgaggacgaggaggcggagaaggcgagggcggcggcggcggcggcggatgcgatgagccctatgcaagacggattggtgataaacaaacctcctgggatgaggttttcagcgagaagaaacatgcgtgggcctgtcgatcaccttcacaattccaacagctttgatgccatttcggtgtcgggttcagatgggagctcagggagatttacccccaaaaacaatgcaagtatgcacagcacatttcttcaggagggcaccaataccctctcacccctgaggaacacattgaccagctccggtgactggtcgggaagctcagctcctgatgctagcaccgacgggtcaaccagcaactccggtgaggcggggttgagggaggcagaggatgatgtggagaagctaagaagtgagatagccactttgacgcggaaattggatgtctccgatatggagttgcaaacactgagaaagcaaattgtgaaggagagtcgacgagggcaagatctttccaaggaagtgggtagcttgagggatgagagggatgctctcagaagagaatgtgaagcactcagagggatgaaaaagactatccatgatgcaaacggatctggtaaaagactatcaagcggggaagacccgtggtcgcagattgaagagctaaagcaagaactgggccatgagaagaatctaaatggagatctgcatttacaattgcagaaaatgcaggaatccaactctgagctacttctggctgtgaaggatcttgatgagatgctggagcagaagaacaaggagatatcacttttgcatgaagaaacactggaggatccccaggaggctgaatatgagctagcattgtcaaatgtgcataatgctggacacaaaatagacatatctgaaacaagttcagttcaagagaaagaagatgagctgatgctggatgcattggcaaagacaaccgatggcatcgctacctctgaacttcaaaataaaattgttgagctgagcaatgaaatcgagttgtataagaaggaccgtgaagacctcgagatgcaaatggagcaacttgcacttgactatgagatcctgaagcaagagaaccatgacatctcttctaggctggagcaaacacagttgagggagcagctaaggatgcagtacgagtgttcagcacatttgtctataataagcgatcttgaagccaatgttgagagcctggagaatgaactccaggaacaatccaaaagattagaggctgacatacaagaggtaatgcgtgcaaaggttgaacaagagcaaagggccataaaggccgaggagtccctgaggaaagcaagatggaacaatgccactactgctgaacgactccaggaggaattcaagatgttgtcttcacaagtttcctctgctttcagcgcaaatgaacagttgcttatgcaagctagaaaagaggctgcagagctacagttacagaagggccagttggaagaattactacagaaggcacaagaagatcttggatcaatccaagaacaacaccgagtgaaggttcaacagttactgaccttagtggatttcaagtcaaaggagacagacaggctggtaatggagcttaaaagcaagagtgatgagttccagaatcagaagagatgcaacgaagcaaagttaagtgttctctcagaagaaatagatcaactcaaagctaagattgagaatctgtcaaatgaacgagacaatctcttcgaagagaatgagcagaaggacaaggaattagctgcaaattgtcaaaaggatatgttcttgcaggatagagatgctgagatagctttgctcaacaaagaacttgcttcaatcaaggaccaagtgcagacatatttagaggagataaacactttaaaaagttcaaagaatgaaaaggaggagatgatcgagaagctgcaatcagagattagatcgttgaaattcgagtatgacaacctgaaaattttgatgtccactaacgactctgagaaacacaaccttgcttcccaagtgctgaagcttcggagagcccttgaaagcagggaggatgtgaaacaaaatggtgtcaaatcagatgaggacaaccaccatgctacttctaagcgcatcaagcatgacgacggcaccaccgggagctgtaacgtgctgccaagcaccaacagacacaatgcaaatggtgactgcaatgggcatgacaggagggatgcagctcatgatcagtcggtaaaggagctggaaatcctgaaggagaggaacactgcactggaggaagagctcaaagaactgcacgggcggtactcggagataagcctgaaattcgcggaagtcgaaggcgagaggcagcagctggtgatgacggtgcgcgccctgaagaactccctgaggtga</cdnaseq>

Protein Sequence

<aaseq>MFKSARWRGGGGGGGKAKAVFKLQFHATQVPEVGWEAMMVVVTP RDAGRPTARTESAQVADGACQWPAPVYEATKLPSSGKDKIYQFLVYDTGSTKAALLGE ATLNLSEYADAFKPWIVTLPLSGSPGAQLHVTIQRVVGGGGGGGGGCGDDASENGGDV SPVVARTPPRKTLQSQLSRCEDEEAEKARAAAAAADAMSPMQDGLVINKPPGMRFSAR RNMRGPVDHLHNSNSFDAISVSGSDGSSGRFTPKNNASMHSTFLQEGTNTLSPLRNTL TSSGDWSGSSAPDASTDGSTSNSGEAGLREAEDDVEKLRSEIATLTRKLDVSDMELQT LRKQIVKESRRGQDLSKEVGSLRDERDALRRECEALRGMKKTIHDANGSGKRLSSGED PWSQIEELKQELGHEKNLNGDLHLQLQKMQESNSELLLAVKDLDEMLEQKNKEISLLH EETLEDPQEAEYELALSNVHNAGHKIDISETSSVQEKEDELMLDALAKTTDGIATSEL QNKIVELSNEIELYKKDREDLEMQMEQLALDYEILKQENHDISSRLEQTQLREQLRMQ YECSAHLSIISDLEANVESLENELQEQSKRLEADIQEVMRAKVEQEQRAIKAEESLRK ARWNNATTAERLQEEFKMLSSQVSSAFSANEQLLMQARKEAAELQLQKGQLEELLQKA QEDLGSIQEQHRVKVQQLLTLVDFKSKETDRLVMELKSKSDEFQNQKRCNEAKLSVLS EEIDQLKAKIENLSNERDNLFEENEQKDKELAANCQKDMFLQDRDAEIALLNKELASI KDQVQTYLEEINTLKSSKNEKEEMIEKLQSEIRSLKFEYDNLKILMSTNDSEKHNLAS QVLKLRRALESREDVKQNGVKSDEDNHHATSKRIKHDDGTTGSCNVLPSTNRHNANGD CNGHDRRDAAHDQSVKELEILKERNTALEEELKELHGRYSEISLKFAEVEGERQQLVM TVRALKNSLR</aaseq>

Gene Sequence

<dnaseqindica>1..84#191..382#503..622#770..834#997..1141#1617..3650#4217..4338#4440..4626#atgttcaagtcggcgcggtggcgcggcggcggcgggggcggggggaaggcgaaggcggtgttcaagctgcagttccacgccacgcaggcacggataattaatttgctcgccgcgacgagcgaagaatttttgttgttgttgatttgttggttttgtgatgatgatttgggttggttgggtgggttgatttcaggtgccggaggtgggatgggaggcgatgatggtggtggtgacgccgcgggacgcgggccggccgacggcgaggacggagagcgcgcaggtcgccgacggcgcgtgccagtggcccgccccggtctacgaggccaccaagctcccttcctccggcaaggacaagatctaccagttcctcgtctacgacacggtgcgttccctctcctcgccgccaccgcccaccgccaccgacaccgccattactcacccccccgcttctcgcttgcccgtcatgtgctcgacgatttgtctcacccgccgcacaatgcagggctcgaccaaggcggcgctgctcggggaggcgacgctgaacctgtccgagtacgccgacgcgttcaagccgtggatcgtcacgctgccgctcagcggcagccccggcgcgcagctgcacgtgagcacctcgtcccaatctcacctcaatctctctctctctcccttaaaaaggatcggcgattgtttttcctgtgagctttgacggcgacgcgctcgcggtggttcttggggggctcatgttggtggtgcttgtaccctgtgacaggtgaccatccagcgggtggtgggtggtggtggcggcggcggcggtgggtgcggtgacgacgccaggtgggtgtgttgctggtggttgtttaatctcgaccatctcttcttctccttcttcttctgcggctgccgcagcagatttcgccattgctgctgctgcattgtgctctgagctcaaccagatttaggcatttgaggtgagtgattgttcttgctgtgtggcagtgagaacggcggcgacgtgtcgccggtggtggcgaggacgccgccgaggaagacgctgcagagccagctgagccggtgcgaggacgaggaggcggagaaggcgagggcggcggcggcggcggcggatgcgatgagccctatgcaagtaaggattggaggtgttcttgagagcttttcctttttcgtgcatcatcattgcattgctttgtttcgttttggtgatggataaaaaagaaggcttttggcatgcaaagaagattgcaaaagaaaaagaggggaaagggagcttacatttttgtgattgatcatttgggaagtttttgttgatgtgtgatttttcttttttgtttgagatcagaatttttcatgctgaactgttcgagatcagaatttctcttgctgaacttgaatcgtactgttttaattttttttttgttgctgtgtgatattttttgtttgagatcagaattttttgtgctgaactgtttgagatcagaatttctcttgctgaactttaatcatatcgtttcactttttgcttgagaagggtgagattttggcactgaacaatggatgtaggatctgactttcgcctgtttttgtggtgatctcttttacaggacggattggtgataaacaaacctcctgggatgaggttttcagcgagaagaaacatgcgtgggcctgtcgatcaccttcacaattccaacagctttgatgccatttcggtgtcgggttcagatgggagctcagggagatttacccccaaaaacaatgcaagtatgcacagcacatttcttcaggagggcaccaataccctctcacccctgaggaacacattgaccagctccggtgactggtcgggaagctcagctcctgatgctagcaccgacgggtcaaccagcaactccggtgaggcggggttgagggaggcagaggatgatgtggagaagctaagaagtgagatagccactttgacgcggaaattggatgtctccgatatggagttgcaaacactgagaaagcaaattgtgaaggagagtcgacgagggcaagatctttccaaggaagtgggtagcttgagggatgagagggatgctctcagaagagaatgtgaagcactcagagggatgaaaaagactatccatgatgcaaacggatctggtaaaagactatcaagcggggaagacccgtggtcgcagattgaagagctaaagcaagaactgggccatgagaagaatctaaatggagatctgcatttacaattgcagaaaatgcaggaatccaactctgagctacttctggctgtgaaggatcttgatgagatgctggagcagaagaacaaggagatatcacttttgcatgaagaaacactggaggatccccaggaggctgaatatgagctagcattgtcaaatgtgcataatgctggacacaaaatagacatatctgaaacaagttcagttcaagagaaagaagatgagctgatgctggatgcattggcaaagacaaccgatggcatcgctacctctgaacttcaaaataaaattgttgagctgagcaatgaaatcgagttgtataagaaggaccgtgaagacctcgagatgcaaatggagcaacttgcacttgactatgagatcctgaagcaagagaaccatgacatctcttctaggctggagcaaacacagttgagggagcagctaaggatgcagtacgagtgttcagcacatttgtctataataagcgatcttgaagccaatgttgagagcctggagaatgaactccaggaacaatccaaaagattagaggctgacatacaagaggtaatgcgtgcaaaggttgaacaagagcaaagggccataaaggccgaggagtccctgaggaaagcaagatggaacaatgccactactgctgaacgactccaggaggaattcaagatgttgtcttcacaagtttcctctgctttcagcgcaaatgaacagttgcttatgcaagctagaaaagaggctgcagagctacagttacagaagggccagttggaagaattactacagaaggcacaagaagatcttggatcaatccaagaacaacaccgagtgaaggttcaacagttactgaccttagtggatttcaagtcaaaggagacagacaggctggtaatggagcttaaaagcaagagtgatgagttccagaatcagaagagatgcaacgaagcaaagttaagtgttctctcagaagaaatagatcaactcaaagctaagattgagaatctgtcaaatgaacgagacaatctcttcgaagagaatgagcagaaggacaaggaattagctgcaaattgtcaaaaggatatgttcttgcaggatagagatgctgagatagctttgctcaacaaagaacttgcttcaatcaaggaccaagtgcagacatatttagaggagataaacactttaaaaagttcaaagaatgaaaaggaggagatgatcgagaagctgcaatcagagattagatcgttgaaattcgagtatgacaacctgaaaattttgatgtccactaacgactctgagaaacacaaccttgcttcccaagtgctgaagcttcggagagcccttgaaagcagggaggatgtgaaacaaaatggtgtcaaatcagatgaggtaaatattgcataatcagatatttctgtagcacaaatagttctctaactctcctttttaagtttcttcattgaaattccttccatgcttttctccatcatatctataaccaaatcaggtttaagttgttagggacaattgaattgctccaaacacaactaacagaaacttgttagaagaaaatgatacaagtattccttaagaccacacaattgaacaagtaggtgtaacttccctttcgtattgaagtcagcatgctgggctactcttaaaaactcatgtagttgcgagttgtgaccacagataagtaggactatcttctataagaatttttttcatgatttacatccttttgcacatggggagataaatttgtttttattcaccattcagttgtacagatcccttctgataggtaggggatatctttatgaatagaggtccccgctaactaggatgtgatattatatatttgttgagctgcctgtcctttacatacctatgcttagattgtaatcatacgctttggtacctagaaagttacacacaatgttgtgttttttcaggacaaccaccatgctacttctaagcgcatcaagcatgacgacggcaccaccgggagctgtaacgtgctgccaagcaccaacagacacaatgcaaatggtgactgcaatgggcatgacaggaggtataatctacactcatagcaaaactttacctttctataattcagtaccacatggtccattgctgacagactttgccggtggcaattatcaatcaatgtagggatgcagctcatgatcagtcggtaaaggagctggaaatcctgaaggagaggaacactgcactggaggaagagctcaaagaactgcacgggcggtactcggagataagcctgaaattcgcggaagtcgaaggcgagaggcagcagctggtgatgacggtgcgcgccctgaagaactccctgaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0504600, RefSeq:Os10g0504600