Os01g0737500

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Revision as of 04:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0737500| Description = Protein of unknown function UPF0005 family protein| Version = NM_001050715.1 GI:115439800 GeneID:4327877| Length = 2...")
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Gene Name

Os01g0737500

Description

Protein of unknown function UPF0005 family protein

Version

NM_001050715.1 GI:115439800 GeneID:4327877

Length

2500 bp

Definition

Oryza sativa Japonica Group Os01g0737500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32519935..32522434

Sequence Coding Region

32520030..32520360,32520473..32520613,32520858..32521127,32521339..32521529

Expression

GEO Profiles:Os01g0737500

Genome Context

<gbrowseImage1> name=NC_008394:32519935..32522434 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32519935..32522434 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcaggggcgacagcgccgtgggcggtgtcaccgtcgacgtgacactgtcgccgaacgccgtgctcccgggcttcgccaagaggcccgaggcgatgaccgaagcgagctgctgcggtggcggcttccctcggtgcgcccgggcggccgccgcggcggcgtgggctttcgccagcgaggacgccggcagggtggcgttcgccctcaaggccggcctcgcgatgctcctggcgtcgctgctggtgctcgtcggcgagcccttcaggctgttcggcaccaacatcatctggtccatcctcaccgtcggcatcatgttcgagtacaccgttggcgccagtttcaaccgagggtttaaccgggccgtggggagcatggtggccggagttgttgctatcgcggtgatctggatttcgctcagatgcggcagtgtcgccgagccgtacgtgattggcctaagcatcttcctagttggggccgtgacgtcgttcgtgaagcagctgccggcgctggcgccgtatgagtacggcttccgggtgatcctcttcacctactgcctcatcatggtgtcggtctaccgcgtcggcgagcccgtcgccgccggcctcgaccggctttacgccatcgccatcggcgccgtgctggcgctcctcgtcaacgtgctcatcttcccggcgtgggccggcgagcagctccaccgcgagctcgtcgccagcttcgccgccgtcgccgactcgctccacgactgcgtcaggagctatctgtcaggcgacgaaacggccgtcgacggcggcgaaccagcaattgagaaatgccgcgccatcctgaacgcatccgctaggatcgaatccttggtaagattgccatacgcgcgtgcttgcctgtgtatatactgtacaccacacggtcacacacactacgtagctttgacttga</cdnaseq>

Protein Sequence

<aaseq>MSRGDSAVGGVTVDVTLSPNAVLPGFAKRPEAMTEASCCGGGFP RCARAAAAAAWAFASEDAGRVAFALKAGLAMLLASLLVLVGEPFRLFGTNIIWSILTV GIMFEYTVGASFNRGFNRAVGSMVAGVVAIAVIWISLRCGSVAEPYVIGLSIFLVGAV TSFVKQLPALAPYEYGFRVILFTYCLIMVSVYRVGEPVAAGLDRLYAIAIGAVLALLV NVLIFPAWAGEQLHRELVASFAAVADSLHDCVRSYLSGDETAVDGGEPAIEKCRAILN ASARIESLVRLPYARACLCIYCTPHGHTHYVALT</aaseq>

Gene Sequence

<dnaseqindica>96..426#539..679#924..1193#1405..1595#gtacacaatagggacacaacacaagtgtagcaaccgccttagtttcctcttgttgatcaaacgacatattcgccgtgtacgtacgcacggtgacaatgagcaggggcgacagcgccgtgggcggtgtcaccgtcgacgtgacactgtcgccgaacgccgtgctcccgggcttcgccaagaggcccgaggcgatgaccgaagcgagctgctgcggtggcggcttccctcggtgcgcccgggcggccgccgcggcggcgtgggctttcgccagcgaggacgccggcagggtggcgttcgccctcaaggccggcctcgcgatgctcctggcgtcgctgctggtgctcgtcggcgagcccttcaggctgttcggcaccaacatcatctggtccatcctcaccgtcggcatcatgttcgagtacaccgttggtccgtacacatacaagtagcagctactgttagtttaatttctacgctaattaatcgatatacatatgccgcgaaattctaattccaactgtttagatttctgttcttgcaggcgccagtttcaaccgagggtttaaccgggccgtggggagcatggtggccggagttgttgctatcgcggtgatctggatttcgctcagatgcggcagtgtcgccgagccgtacgtgattggcctaagcatcttcctagttggtaagttgcaaattaaggcgaaacactagtactttctccgttcatgttataagactttctagcattgtctatatttatatatatgttaatgaatttagacatatatgtgtacatagattaattaacatctatatgaatatgatcaatactaaaaagttttataacctgaaatatagaggtagtaacacattatctatgtggcgcacgacaaaacatgtgatgtggcttggcttttcggtcgcaggggccgtgacgtcgttcgtgaagcagctgccggcgctggcgccgtatgagtacggcttccgggtgatcctcttcacctactgcctcatcatggtgtcggtctaccgcgtcggcgagcccgtcgccgccggcctcgaccggctttacgccatcgccatcggcgccgtgctggcgctcctcgtcaacgtgctcatcttcccggcgtgggccggcgagcagctccaccgcgagctcgtcgccagcttcgccgccgtcgccgactcgctccacggtgcaataaatcactccttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcacacacacacacacacacacacacacacaccaatcaatcaatcctcctttgcacgattgcaatgcgaaagacgccacaaagcacaccgtctgacgaatccactcgttgatctgtcagactgcgtcaggagctatctgtcaggcgacgaaacggccgtcgacggcggcgaaccagcaattgagaaatgccgcgccatcctgaacgcatccgctaggatcgaatccttggtaagattgccatacgcgcgtgcttgcctgtgtatatactgtacaccacacggtcacacacactacgtagctttgacttgaacgtgtaatggcgggcgtacgcaggcgagatcggcgagatgggagccgccgcacggccggttccgctccttctccttcccgtggtcgcactacgcccgcgtcggagccgtgctgcgccactgcgcctacgaggtcgtcgccatgcacggctgcctgcactccgagatacaggccagttaatttcttctcgatcctgttccgaagcaatgcaatggcttagcgcacaagtgcacacagctcgccgccgatcggtgtcagattctgtttgtttcttcggtgcaggcgccggacggagtcagggaggcgttccgtgcggagatcgaggacgcgacggcgcaggcggccgagctcgtccgtgtccttggcggcgacgtcgacggcatgacgcgcagcgccgagaggctgagccttctcaagagcgtgcacggctccgcctaccgcctccagctcgcgctggagctcaactcgcacctcctcgtctcgtccggctccgtggcggaggagatcacgagcggcggcggcctcgagcgctcgtgctcgcggctgcgcgagagcgcgcggcggcagaggctgtcgtggccgtcgcgggaggcggacgagctggaggaggcggaggccggcggcggatacgcggcgatgatggtgagggtgcgcgcgctggagagcacggcggcgctgtcgctggccacgttcgcgtcgctgctgctcgagttcgtggcgcggctggaccacctcgtggatgccgtcgacgagctctccaagctcgcaaaattcagggaagaaagcgactcgatcaaactagctacctgaccaggccatctgggacgtatcaccagcacgtttatcaacgtgctaaaccaataccgtgtattttacatggactttaattagaggattgttttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0737500, RefSeq:Os01g0737500