Os01g0742400

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Revision as of 04:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0742400| Description = Protein kinase-like domain containing protein| Version = NM_001050748.1 GI:115439866 GeneID:4326546| Length = 3742 b...")
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Gene Name

Os01g0742400

Description

Protein kinase-like domain containing protein

Version

NM_001050748.1 GI:115439866 GeneID:4326546

Length

3742 bp

Definition

Oryza sativa Japonica Group Os01g0742400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32761875..32765616

Sequence Coding Region

32761944..32764677,32764808..32765274

Expression

GEO Profiles:Os01g0742400

Genome Context

<gbrowseImage1> name=NC_008394:32761875..32765616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32761875..32765616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaaccatggcaaaagcaccgggccctgtgtacctcctcttcctgctgctcgcgctgccttgctgcctcatcccgcaccgcggcgcggcccagcccgcggcgaacgaggcgcggctgctcctccagatcaagcgcgcgtggggcgacccggccgtgctcgcgggatggaacgacacggccgcgcccgcggctcactgctcctggccctacgtcacatgcgacaccgccgggcgcgtcacgaacctctccctcgccaacaccaacgtgtccggccccgtgtcggacgccgtcggcggcctctccagcctcgtgcacctcgacctctacaacaacaacatcaacggtacgttcccgacgagcgtgtaccgctgcgtttctctccggtacctcaacctgtctcagaactacctcggcggggagctccccgccgacatcggcgtcggcctcggggagaacctgacaactctagtcctcagcggcaactacttcactggcaccatccccaagtcgttgtcccgattgcagaagctggagtggctgatgctggacaacaacaacctcaccggcacaatcccgggagagctcggcgacctgacgagccttacgacgctgacgatctcgacgaacaagctcggaccgggtcagctgccggagtcgttcaagaacctgactaagctgacaaccctctgggcgagaaagtgtcagctcgtcggcgacatgccagcctatgtggccgacatgccggacttggtgacgctcgacctggcggtcaacaacttgacaggaagcattcctccggggatctggagcctgaagaagctgcagtgcctgtttctatttgcgaacaagctcaccggcgacatcgtcgtcgccgatggtgctttcgccgcagtgaatttggttttcatcgacctgtccgcgaatcccaagctgggtggaccgattcctcaagactttggtctcttgcagaagcttgaagtcatccacctgtactttaacaacttctccggtgagataccggcgagcatcggtcggttgccggcattgaaggaaatacacctattcaataatagtctcaccggcgttctaccaccggagcttgggcagaagtcaccggatttgtgggatcttgaggttgatttcaacaagttcaccggcccgattcctgaggggctgtgtgacggcggcaagctcaacatattcaccgcagcgaacaacctcttgaacggctccatcccggagaggctcgccggctgcaccacgctccagaccctgtttctccccaacaacaagctgtccggcgatgtgccagaggcgctatggacggcgacaaagctccaattcgtgcagctgcagaataatggcctcaccgggactctgccttccaccatgtacagcaacctttcgagcttaaccgtggagaacaaccaatttcgtggtagcatccccgcggcggcggctgctcttcagaagttcatcgccgggaacaacaatttttccggggagatcccggagagtctcggcaacggcatgccggtgctgcagacactaaacctgtctggtaaccagctctccggcgggatcccgaagagcgtttccaagcttaaagtcttgactcagcttgatttgagcaagaaccagctctccggcgagataccggccgagctgggcgccatgccggtgctcaacgcacttgacctgtcgtcgaacaggctctccggcggcataccgtcgtctcttgccagtctgaatctcaactcgctcaacctctcgtccaaccagctcagcggccaggtgccggccaagttcgccataggtgcctacgcccgcagcttccttgacaaccccaccctctgtacctcaggcctgggctccagctacctcgccggcgtgcggtcctgcaacgccggatcgccaggcagcgcttcctccggtggcgtctcgccagggctccgcgccggtctcctcgtagccggggccgcgctcctcctcgtcatcgtggcgttggccttcttcgccgtccgcgacatcaggagaagaaggaagcgcgtggcgcagcgcgaggactggaagatcacgcctttccagaccgatctgggcttcagcgaggcggccatactccggggtctaacggaggagaacctcgtcggccgcggcggctcggggagcgtgtaccgcgtcgcctacaccaaccggtacaccggcggcgacggcgccgtggccgtgaagaagatacggacgggcgccgcgaaggtggaggagaagctggagcgcgagttcgagtcggaggcgcgcatcctcggcaacgtccggcacaacaacatcgtcaggctgctctgctgcgtctccggcgacgaggccaagctcctggtgtacgactacatggacaacggcagcctggacgggtggctccacgggcgccgcgccatcaacgacgggcgccccgtggtggccgctgtggcgagggcgcggtccgcgcggggcggcgcgcccgctttggactggccgacgaggctcagggtggccgtcggcgccgcgcaggggctgtactacatgcaccacgagtgcaccccgcccatcgtccaccgcgacgtcaagacgagcaacatcctgctcgactccgagttccgggctaaggtcgccgactttgggctggccaggatgctggcgcaggccggcacgcccgacaccgtgtccgccgttgcaggctcgttcggctacatggctcccgagtgtggttacacgagaaaggttgatgagaaggtggacgtgtacagctttggggtggtgctcctggagcttaccacgggcaaggcggccaacgacggcggcgagcacggttccctggcggactgggcgcggcaccactatcaatcgggagagagcatccccgacgctacggatcagtgcatcaggtacgcgggttactccgacgagatcgaggtggtgttcaggctaggcgtgatgtgcacgggggccacgcccgcgtcacggccaaccatgaaggacgtgctgcagatcctggtcaaatgctccgagcagacgcaccagaaatgcaaggcggagagcgggcaggaggagtacgaagtggcgccgctgttgctgccgcaacgaggcagccgccggaaacagcccgcgaaggccaaaggagcagacgacgacgctgacgagaggagcgatttcgattccattgtctga</cdnaseq>

Protein Sequence

<aaseq>METMAKAPGPVYLLFLLLALPCCLIPHRGAAQPAANEARLLLQI KRAWGDPAVLAGWNDTAAPAAHCSWPYVTCDTAGRVTNLSLANTNVSGPVSDAVGGLS SLVHLDLYNNNINGTFPTSVYRCVSLRYLNLSQNYLGGELPADIGVGLGENLTTLVLS GNYFTGTIPKSLSRLQKLEWLMLDNNNLTGTIPGELGDLTSLTTLTISTNKLGPGQLP ESFKNLTKLTTLWARKCQLVGDMPAYVADMPDLVTLDLAVNNLTGSIPPGIWSLKKLQ CLFLFANKLTGDIVVADGAFAAVNLVFIDLSANPKLGGPIPQDFGLLQKLEVIHLYFN NFSGEIPASIGRLPALKEIHLFNNSLTGVLPPELGQKSPDLWDLEVDFNKFTGPIPEG LCDGGKLNIFTAANNLLNGSIPERLAGCTTLQTLFLPNNKLSGDVPEALWTATKLQFV QLQNNGLTGTLPSTMYSNLSSLTVENNQFRGSIPAAAAALQKFIAGNNNFSGEIPESL GNGMPVLQTLNLSGNQLSGGIPKSVSKLKVLTQLDLSKNQLSGEIPAELGAMPVLNAL DLSSNRLSGGIPSSLASLNLNSLNLSSNQLSGQVPAKFAIGAYARSFLDNPTLCTSGL GSSYLAGVRSCNAGSPGSASSGGVSPGLRAGLLVAGAALLLVIVALAFFAVRDIRRRR KRVAQREDWKITPFQTDLGFSEAAILRGLTEENLVGRGGSGSVYRVAYTNRYTGGDGA VAVKKIRTGAAKVEEKLEREFESEARILGNVRHNNIVRLLCCVSGDEAKLLVYDYMDN GSLDGWLHGRRAINDGRPVVAAVARARSARGGAPALDWPTRLRVAVGAAQGLYYMHHE CTPPIVHRDVKTSNILLDSEFRAKVADFGLARMLAQAGTPDTVSAVAGSFGYMAPECG YTRKVDEKVDVYSFGVVLLELTTGKAANDGGEHGSLADWARHHYQSGESIPDATDQCI RYAGYSDEIEVVFRLGVMCTGATPASRPTMKDVLQILVKCSEQTHQKCKAESGQEEYE VAPLLLPQRGSRRKQPAKAKGADDDADERSDFDSIV</aaseq>

Gene Sequence

<dnaseqindica>70..2803#2934..3400#attctcaaaccgaactccccccacttcttcccgcgtccacagcggcttgcggcgggggcagaacacaccatggaaaccatggcaaaagcaccgggccctgtgtacctcctcttcctgctgctcgcgctgccttgctgcctcatcccgcaccgcggcgcggcccagcccgcggcgaacgaggcgcggctgctcctccagatcaagcgcgcgtggggcgacccggccgtgctcgcgggatggaacgacacggccgcgcccgcggctcactgctcctggccctacgtcacatgcgacaccgccgggcgcgtcacgaacctctccctcgccaacaccaacgtgtccggccccgtgtcggacgccgtcggcggcctctccagcctcgtgcacctcgacctctacaacaacaacatcaacggtacgttcccgacgagcgtgtaccgctgcgtttctctccggtacctcaacctgtctcagaactacctcggcggggagctccccgccgacatcggcgtcggcctcggggagaacctgacaactctagtcctcagcggcaactacttcactggcaccatccccaagtcgttgtcccgattgcagaagctggagtggctgatgctggacaacaacaacctcaccggcacaatcccgggagagctcggcgacctgacgagccttacgacgctgacgatctcgacgaacaagctcggaccgggtcagctgccggagtcgttcaagaacctgactaagctgacaaccctctgggcgagaaagtgtcagctcgtcggcgacatgccagcctatgtggccgacatgccggacttggtgacgctcgacctggcggtcaacaacttgacaggaagcattcctccggggatctggagcctgaagaagctgcagtgcctgtttctatttgcgaacaagctcaccggcgacatcgtcgtcgccgatggtgctttcgccgcagtgaatttggttttcatcgacctgtccgcgaatcccaagctgggtggaccgattcctcaagactttggtctcttgcagaagcttgaagtcatccacctgtactttaacaacttctccggtgagataccggcgagcatcggtcggttgccggcattgaaggaaatacacctattcaataatagtctcaccggcgttctaccaccggagcttgggcagaagtcaccggatttgtgggatcttgaggttgatttcaacaagttcaccggcccgattcctgaggggctgtgtgacggcggcaagctcaacatattcaccgcagcgaacaacctcttgaacggctccatcccggagaggctcgccggctgcaccacgctccagaccctgtttctccccaacaacaagctgtccggcgatgtgccagaggcgctatggacggcgacaaagctccaattcgtgcagctgcagaataatggcctcaccgggactctgccttccaccatgtacagcaacctttcgagcttaaccgtggagaacaaccaatttcgtggtagcatccccgcggcggcggctgctcttcagaagttcatcgccgggaacaacaatttttccggggagatcccggagagtctcggcaacggcatgccggtgctgcagacactaaacctgtctggtaaccagctctccggcgggatcccgaagagcgtttccaagcttaaagtcttgactcagcttgatttgagcaagaaccagctctccggcgagataccggccgagctgggcgccatgccggtgctcaacgcacttgacctgtcgtcgaacaggctctccggcggcataccgtcgtctcttgccagtctgaatctcaactcgctcaacctctcgtccaaccagctcagcggccaggtgccggccaagttcgccataggtgcctacgcccgcagcttccttgacaaccccaccctctgtacctcaggcctgggctccagctacctcgccggcgtgcggtcctgcaacgccggatcgccaggcagcgcttcctccggtggcgtctcgccagggctccgcgccggtctcctcgtagccggggccgcgctcctcctcgtcatcgtggcgttggccttcttcgccgtccgcgacatcaggagaagaaggaagcgcgtggcgcagcgcgaggactggaagatcacgcctttccagaccgatctgggcttcagcgaggcggccatactccggggtctaacggaggagaacctcgtcggccgcggcggctcggggagcgtgtaccgcgtcgcctacaccaaccggtacaccggcggcgacggcgccgtggccgtgaagaagatacggacgggcgccgcgaaggtggaggagaagctggagcgcgagttcgagtcggaggcgcgcatcctcggcaacgtccggcacaacaacatcgtcaggctgctctgctgcgtctccggcgacgaggccaagctcctggtgtacgactacatggacaacggcagcctggacgggtggctccacgggcgccgcgccatcaacgacgggcgccccgtggtggccgctgtggcgagggcgcggtccgcgcggggcggcgcgcccgctttggactggccgacgaggctcagggtggccgtcggcgccgcgcaggggctgtactacatgcaccacgagtgcaccccgcccatcgtccaccgcgacgtcaagacgagcaacatcctgctcgactccgagttccgggctaaggtcgccgactttgggctggccaggatgctggcgcaggccggcacgcccgacaccgtgtccgccgttgcaggctcgttcggctacatggctcccggtaacgatctctctctgcttgacactgttaattttgtactctccttttgtgccgtattctatacagaacatgtctagttaattaattcgagtattattatcactgagacttactctctctctcttttcagagtgtggttacacgagaaaggttgatgagaaggtggacgtgtacagctttggggtggtgctcctggagcttaccacgggcaaggcggccaacgacggcggcgagcacggttccctggcggactgggcgcggcaccactatcaatcgggagagagcatccccgacgctacggatcagtgcatcaggtacgcgggttactccgacgagatcgaggtggtgttcaggctaggcgtgatgtgcacgggggccacgcccgcgtcacggccaaccatgaaggacgtgctgcagatcctggtcaaatgctccgagcagacgcaccagaaatgcaaggcggagagcgggcaggaggagtacgaagtggcgccgctgttgctgccgcaacgaggcagccgccggaaacagcccgcgaaggccaaaggagcagacgacgacgctgacgagaggagcgatttcgattccattgtctgaagaaaggagcagagcactgccgcacctttacctactaggaaacactgatgtgagcagggaatggttagtctatgagccagcactgcactgcatgaatataaacgccatattagacagtactagaaaagatgatcatactctattaccttaccttgatggtacacttcttagtactattttgttagctgctcgcggctgatcagatcatttgagctttgataccagtgtgtaagagtacatacatagttcaaactgacatacgaaaagtgaaattatgtccccctctttattctgaaatctgaatgacaaaaggctacacgcgaaaccgctgtgattggtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0742400, RefSeq:Os01g0742400