Os01g0743200
| Gene Name |
Os01g0743200 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001050751.1 GI:115439872 GeneID:4326549 |
| Length |
2857 bp |
| Definition |
Oryza sativa Japonica Group Os01g0743200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:32811465..32814321 |
| Sequence Coding Region |
32811575..32811722,32812218..32812453,32813308..32813514,32813593..32813785,32813870..32814240 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:32811465..32814321 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:32811465..32814321 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgtggcgcccgtccggctcgtggcgtgcattgtcgccctggccgccgtggcgccgggcggagtggcggggcacacacggggcgtgcggccagggagggcggcggggaagcagcagccgtcgttcccggagaacgcgacgcgggtggaggcgatcgagcggcagttcatggagtgggtacggtacatgggcgggctggagcacagcacggtccaccacgcgctcgcccgggcgttcccctcctactcgctcgtcgtcgacaagaacccggcgttcggcgacttcaccaccatccaggccgccgtcgactcgctcccgatcatcaacctcgtccgcgtcgtcatcaaggtcaacgccggcacctacacggagaaggtgaacatatcgccgatgcgcgcgttcatcaccctcgagggcgccggcgccgacaagacgatcgtgcagtggggtgacaccgcggacagtccgtccggccgggcgggacggccgctcggcacatacagctccgcgtcgttcgccgtgaacgcgcagtacttcctcgccaggaacatcactttcaagaacacgtcgccggtgccgaagccgggggcgtcggggaagcaggcggtggcgctgcgggtgtcggcggacaacgcggcgttcgtggggtgcaggttcctgggcgcgcaggacacgctgtacgatcactcgggccggcactactacaaggaatgctacatcgaaggctccgtggatttcatctttggcaatgcgctctctctgtttgaggattgccacgtgcatgcgatcgcgcgggactacggcgcgctgacagcgcagaaccggcagagcatgctggaggacacggggttctcgttcgtcaactgccgggtgacgggatccggcgcgctctacctcggccgcgcctggggcaccttctcccgcgtcgtcttcgcctacacctacatggacgacatcatcatcccccgtggctggtacaactggggcgaccccaaccgcgagctgacggtgttctacgggcagtacaagtgcacgggccccggcgcgagcttctccggcagggtgtcgtggtcacgcgagctcaccgacgaggaggccaagcccttcatctcgctcaccttcatcgacggcacggaatgggtcaggttgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAVAPVRLVACIVALAAVAPGGVAGHTRGVRPGRAAGKQQPSFP ENATRVEAIERQFMEWVRYMGGLEHSTVHHALARAFPSYSLVVDKNPAFGDFTTIQAA VDSLPIINLVRVVIKVNAGTYTEKVNISPMRAFITLEGAGADKTIVQWGDTADSPSGR AGRPLGTYSSASFAVNAQYFLARNITFKNTSPVPKPGASGKQAVALRVSADNAAFVGC RFLGAQDTLYDHSGRHYYKECYIEGSVDFIFGNALSLFEDCHVHAIARDYGALTAQNR QSMLEDTGFSFVNCRVTGSGALYLGRAWGTFSRVVFAYTYMDDIIIPRGWYNWGDPNR ELTVFYGQYKCTGPGASFSGRVSWSRELTDEEAKPFISLTFIDGTEWVRL</aaseq> |
| Gene Sequence |
<dnaseqindica>2600..2747#1869..2104#808..1014#537..729#82..452#accgaacccgcccggccgccacacacgcctctctagctacccggcgcccgttcgagtagcctgtaggcgcgtggcgtcgtaatggccgtggcgcccgtccggctcgtggcgtgcattgtcgccctggccgccgtggcgccgggcggagtggcggggcacacacggggcgtgcggccagggagggcggcggggaagcagcagccgtcgttcccggagaacgcgacgcgggtggaggcgatcgagcggcagttcatggagtgggtacggtacatgggcgggctggagcacagcacggtccaccacgcgctcgcccgggcgttcccctcctactcgctcgtcgtcgacaagaacccggcgttcggcgacttcaccaccatccaggccgccgtcgactcgctcccgatcatcaacctcgtccgcgtcgtcatcaaggtcaacgccggcacctacacgtacgtgcacgcgcgcgcattgggactctgatcttgttggtgcttacgagagagtactgaccatgcacaacgacgatctcgcagggagaaggtgaacatatcgccgatgcgcgcgttcatcaccctcgagggcgccggcgccgacaagacgatcgtgcagtggggtgacaccgcggacagtccgtccggccgggcgggacggccgctcggcacatacagctccgcgtcgttcgccgtgaacgcgcagtacttcctcgccaggaacatcactttcaaggtaacaaatccaccgccgtaattctgtcggggctgtatggcttcgttctcctcaattcgcggtcatgatattgagcagaacacgtcgccggtgccgaagccgggggcgtcggggaagcaggcggtggcgctgcgggtgtcggcggacaacgcggcgttcgtggggtgcaggttcctgggcgcgcaggacacgctgtacgatcactcgggccggcactactacaaggaatgctacatcgaaggctccgtggatttcatctttggcaatgcgctctctctgtttgaggtaacactgtctcctctgctgttctcccgtgaaccctcccccccccccccccccctccattttgtgcgaaatcactacgttgtgttttatgtcatcctgtatcatactgtcatatgtcatgcatgcgccgaggtgcaaatatggaattcatatgcaaatgtttcgggaaaggttcccaggcgttaaatttttttttatcgccatagagtatacagagcaaccaaaacagagcacgtcagagtggcatccaaaaggagtgttccttataggagtgatctgaaatttacgccagtttcctaaaaaaaaaaatttacgccagcacgtttaaatactaccaacacgaagtacgaaccagcttaactggagttcttttcgtacgccatgacgacttgacatgtcgttgttaattatgcgctgaccaaattaggatgtaccgtgtcaattcccgtacatccccgtttaaacacatcaaagtacgtatttttagcctcggttttcctggcgtgcacgctggaccatgtgtcaggtttcaaccaacgccaatgtagcaacacgtgcacctcgaagcggtttggttcggtgttcggcccagcacaccccacaactgacgcgacagctaaccgcgttctctttgccggtgtccgcttctgtttctgccgccgacctcgcggctggccgccggccctacacccacgggcgtgcagagtgggggacgctaatgaacaacctctcgtcgtatgcctactaggcttggctgttatttgagttccgttattttgcactttttttttccttttggcttcggttcgatgcatgtggtgatcggaggtatatgtgtatgccctgcactgcaggattgccacgtgcatgcgatcgcgcgggactacggcgcgctgacagcgcagaaccggcagagcatgctggaggacacggggttctcgttcgtcaactgccgggtgacgggatccggcgcgctctacctcggccgcgcctggggcaccttctcccgcgtcgtcttcgcctacacctacatggacgacatcatcatcccccgtggctggtacaactggggcgaccccaaccgcgagctgtaagacatctcatcgctctctccgaacttatctgtgaagctgctagcctgttacgtgcgatcagagtgaagtttgtagaaacagttttgtatgtacagaagcaaagtcactttaattccctagccaaccgaaagccgcatcggtgttgcactgttggtctgttgctgtttgcaaaagctcggtgtagctaggcgcatggccgtgtgcgcagagaagaatcgtagacatagcttccatatcaataatttgccagtgcacgggaaaagggagagcactctccccttctcggtgcatggcgttgcacgggtgcatctcccccttttgatctctttggaactgaatcatacagcttttgagattcgatgctctgttactaaacaggatcggcaaaaggcagtgacagtctgacagatatatcggtaaaactcagtagtttcctgatgctgtacgcaccactgaccgttgttgctgtattgctcctgctgctgttgcaggacggtgttctacgggcagtacaagtgcacgggccccggcgcgagcttctccggcagggtgtcgtggtcacgcgagctcaccgacgaggaggccaagcccttcatctcgctcaccttcatcgacggcacggaatgggtcaggttgtgagagatcgatccatcggtcgatcgagttcattgtagcacaccgcacacggcatcatagcgtcacacgatgtaaaaagaaaaacagacgaatatatatacagattcatttgc</dnaseqindica> |
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