Os01g0743500

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Revision as of 04:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0743500| Description = Cytosolic NADP malic enzyme| Version = NM_001050754.1 GI:115439878 GeneID:4326552| Length = 4681 bp| Definition = O...")
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Gene Name

Os01g0743500

Description

Cytosolic NADP malic enzyme

Version

NM_001050754.1 GI:115439878 GeneID:4326552

Length

4681 bp

Definition

Oryza sativa Japonica Group Os01g0743500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32832417..32837097

Sequence Coding Region

32832528..32832661,32833049..32833169,32833257..32833331,32833451..32833602,32833759..32833864
,32833997..32834062,32834150..32834245,32834352..32834423,32834513..32834596
,32834735..32834833,32835309..32835356,32835445..32835498,32835579..32835677
,32835770..32835859,32835959..32836036,32836172..32836246,32836394..32836484
,32836602..32836730,32836823..32836911

Expression

GEO Profiles:Os01g0743500

Genome Context

<gbrowseImage1> name=NC_008394:32832417..32837097 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32832417..32837097 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggcgaggagaggggaacggcgctgcgacgatggcgggggtggccaccggtggcgtggaggacgcctacggcgaggaccgcgccaccgaggaccagcccatcacgccgtgggccgtctgcgtcgccagcggtcactctctgctgagggatccacggcacaacaaggggctatcattcacggagaaagagcgagacgcccactacctgcggggtttgctgcctccagtcgtgctctcccaagaacttcaggagaagaggcttctgcaaaatgtgcggcagtttcaggttcctctgcaacgttacatggctctgatggaccttcaggagaggaatgagaggcttttctacaagctcctgatcgacaacgttgaggaattgctccccgttgtgtacacgccgacggtgggcgaggcttgccagaagtacgggtcaatctttagacgaccacagggtctgtacatcagtcttaaagagaaggggagaatattggagttactgaggaactggccagagaagagcattcaggttattgttgttactgatggtgagcgcattttaggtctcggggatcttggttgccagggtatgggaatccctgtgggaaagcttgcactatacacagcccttggaggtgtccggccttctgcttgcttacctatcaccattgatgtgggaacaaacaatgaggatttactgaaggacgagttctacattggattaagacaaaaacgagccactggccaggaatatagtgatcttctggatgaattcatggctgctattaagcagaactatggacagaaggtgctagtccagtttgaagacttcgcaaattacaatgcatttacccttcttgagaagtaccgtgcaaacaatcttgtcttcaatgatgatattcagggaacggctgctgtagtgcttgcaggcctcattgctgctcagaaatttgtcagtgggactttagctgatcacacattcttattctttggcgcaggagaggctggtacaggcattgctgaactagtggctctcgagatatcaaatcagtccaaagttccagtggaagatgctcgcaaaaagatctggctacttgattcaaaggggttgattgtcagttcacgtaaagattctcttcagccctttaagaagcgatatgcccatgagcatgaaccagtcaaagatctactggatgctgttaaggttatcaaaccgactgcattgataggttcagctggtgtgggtcaaagtttcacaaaagaggtgattgaggctatgagttcaattaatgagagaccaatcatcctcgcactatccaatccaacatcacaatctgaatgtactgctgaacaggcatattcatggagtaagggccgtgcaatatttgggagtggaagtccatttgatccagttaaatacaatgacaagcttttcgtgcctgcacaggcaaacaatgcatatatattcccaggatttggcctaggcgtagtgatttcaggagcgataagggtgaaagatgaaatgatccttgctgctgctgaaggcttagctgaccaggtgaccccagagcatgttgacaaaggccttatttatccacccttttcctgcatcaggaagatatcagccaacatcgcagcccgcgttgctgcaaaagcctatgaccttggattggctagccatctccctcgcccaaaagacttggtgaagtacgctgagagctgcatgtacagccccatttaccgttcttatagatga</cdnaseq>

Protein Sequence

<aaseq>MAGRGEGNGAATMAGVATGGVEDAYGEDRATEDQPITPWAVCVA SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQR YMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKE KGRILELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSA CLPITIDVGTNNEDLLKDEFYIGLRQKRATGQEYSDLLDEFMAAIKQNYGQKVLVQFE DFANYNAFTLLEKYRANNLVFNDDIQGTAAVVLAGLIAAQKFVSGTLADHTFLFFGAG EAGTGIAELVALEISNQSKVPVEDARKKIWLLDSKGLIVSSRKDSLQPFKKRYAHEHE PVKDLLDAVKVIKPTALIGSAGVGQSFTKEVIEAMSSINERPIILALSNPTSQSECTA EQAYSWSKGRAIFGSGSPFDPVKYNDKLFVPAQANNAYIFPGFGLGVVISGAIRVKDE MILAAAEGLADQVTPEHVDKGLIYPPFSCIRKISANIAARVAAKAYDLGLASHLPRPK DLVKYAESCMYSPIYRSYR</aaseq>

Gene Sequence

<dnaseqindica>112..245#633..753#841..915#1035..1186#1343..1448#1581..1646#1734..1829#1936..2007#2097..2180#2319..2417#2893..2940#3029..3082#3163..3261#3354..3443#3543..3620#3756..3830#3978..4068#4186..4314#4407..4495#ggcctccagctactacgcgtcgtggcttctcgcgctgcattccgagagacgacgaagcggtggtggtggtggcggcggcgctgcaggcaaggcgcgaggacggtgagcggcatggcggggcgaggagaggggaacggcgctgcgacgatggcgggggtggccaccggtggcgtggaggacgcctacggcgaggaccgcgccaccgaggaccagcccatcacgccgtgggccgtctgcgtcgccaggtatgcatggcttgtgccttgtgatcttctgttcttgcgtcgggacaaaatggttttacatgtgtgcatgcgccatttgaagaagctttgccaacgtatcagactttcagtactgaactaatgattattgattaagtgattagtgatttcactagtactagtagctttgagcttatctgggctcaatttgagattttcctatcacacgatctcgcatagtcatttcaacatattcctagttacttcatgaattcgtttgaactatgagcaatcaaccactaaccagaccatgataagcccagtccagctctaaactaagaaagtaaacgaccagtctacacatatgtgatctggtgttaattttgtgattgctacttggttttttagcggtcactctctgctgagggatccacggcacaacaaggggctatcattcacggagaaagagcgagacgcccactacctgcggggtttgctgcctccagtcgtgctctcccaagaacttcaggtttgctcccttccacttccccagcgctcgattcatctgataacattgtcggtagacgtttctcactgaagcgtgcatcacctgcaggagaagaggcttctgcaaaatgtgcggcagtttcaggttcctctgcaacgttacatggctctgatggaccttcaggtgtgctctggcttcatcttgtttagagaaagcgtcagaagggtagaagaaaactagatatcggttgcagtttactaggcacggatgtcatgttgttccggtggacggttggtttgcaggagaggaatgagaggcttttctacaagctcctgatcgacaacgttgaggaattgctccccgttgtgtacacgccgacggtgggcgaggcttgccagaagtacgggtcaatctttagacgaccacagggtctgtacatcagtcttaaagagaagtatgtttcttccatcatttgtatctgttgctcatttctgttggtagtttgccccttcaccttatgttaatttttacttattttgaacaaactgatggcagaagtttgaggtgtaaatcatcttcaattttctaaaatgaggtgcttttgtaccagggggagaatattggagttactgaggaactggccagagaagagcattcaggttattgttgttactgatggtgagcgcattttaggtctcggggatcttggttgccaggtcagtaaattagtcctgacatttgtgctttgataaggatccttcatgcatttggattgtttaaagtgctattactttgctgcttaacatgacttttttttccatgttcgttgaaaattgcaacatatatagggtatgggaatccctgtgggaaagcttgcactatacacagcccttggaggtgtccggccttctgctgtaagttattttcatttcaattgttttcttcagcaatgagcagaatagcagattgatgtagcattttcccaccattttgcattccagtgcttacctatcaccattgatgtgggaacaaacaatgaggatttactgaaggacgagttctacattggattaagacaaaaacgagccactggccaggtttcatgcttatttcttggatatgctcattcagttttcatgaatgatatgtaacaatatggttgtgatttcagtcatgaaagttggtttttatttctttaattaggaatatagtgatcttctggatgaattcatggctgctattaagcagaactatggacagaaggtgctagtccaggtatggaaatgttaaaaggaaagaggaaaactttggtctgtaaatgagctgttcctatgggcaattgttcaatttgttttattttacagtttgaagacttcgcaaattacaatgcatttacccttcttgagaagtaccgtgcaaacaatcttgtcttcaatgatgatattcaggtagtaggttcagatctcacttttttactcttcgtattggtctcgttacagttcctaaatgaaagcgaactagtgaatgtgcatttatactgggtttcacaacaataggagtaaaccatgaaactgtggtgtaaacagggaacggctgctgtagtgcttgcaggcctcattgctgctcagaaatttgtcagtgggactttagctgatcacacattcttattctttggcgcaggagaggtaagctgaccttccctttcagtgatatggagggtgcattctgcattgctcacatttactttagactgctgcaacatgtctgaactctgaacatccatctatacatcgcgtattgtattataagaatatacattgagtattgcttttacattcctgtcataactgtagcaatgaataattgaagatagtcagtaacaaaaaaaaaacataaatagttggactgattatcctatcagtagagttggttagccataggaataggacttatcacaattcaaaacttcagttgttcagaaaccttttctgtttcttgctagttgagatgcaaaaaagtttttttttttgcttgaatagtgaataatctaagcatgccaccagtaaattagtgatttgactcttaatcaccgacgagcaaaaatttgttctatcatgtaaaacctatagattgttccaaatagattacctgttcttgcaggctggtacaggcattgctgaactagtggctctcgagatatcaaatcaggtaactcgattgctagcttcacctaatttgatttttggtaatttgtctatgatggctcaattaatcgttagctatgattttttttcagtccaaagttccagtggaagatgctcgcaaaaagatctggctacttgattcaaaggttaatataataatgatatcgcagtgttaacttgcatcctttggtaattggaccattgagagttgatttatgcattgcaggggttgattgtcagttcacgtaaagattctcttcagccctttaagaagcgatatgcccatgagcatgaaccagtcaaagatctactggatgctgttaaggtgcaaaacttgaaccataagagatgcatattatatcagtatacatttttctttcaggcaccaccacactagactgatttgtatctttttaggttatcaaaccgactgcattgataggttcagctggtgtgggtcaaagtttcacaaaagaggtgattgaggctatgagttcaattaatgaggtaacaataaaatcattgacctcttcagataattgactcataataagtcacattaatgacacattcaagaactgaaagcttggttccaatataatgcagagaccaatcatcctcgcactatccaatccaacatcacaatctgaatgtactgctgaacaggcatattcatggagtaaggtgatattccatgtgcaacctcacgccatctatgatctatcccattgagatcaacacatatatgaactataaacttctgtaaattatgtcacaagcatttatgctttataacttatcaaatgatacatcatgcagggccgtgcaatatttgggagtggaagtccatttgatccagttaaatacaatgacaagcttttcgtgcctgcacaggttagggatattacctttgcgcacgacatgtgcagttctcaattattattatttttttgataaatcactggaggggagagattccccacctgaattttagttctcaggtttttgacaatttaaacatactctttaccctttgaataggcaaacaatgcatatatattcccaggatttggcctaggcgtagtgatttcaggagcgataagggtgaaagatgaaatgatccttgctgctggtaaatgcattctatatgagcccaagagttttttttcccatccactttactaatgtgctaaccacgctattgttgttttcttgcttgttttgtttttgccttcatggcattggacagctgaaggcttagctgaccaggtgaccccagagcatgttgacaaaggccttatttatccacccttttcctgcatcaggaagatatcagccaacatcgcagcccgcgttgctgcaaaagcctatgaccttggtaatatttgttccttttgatgtggttcattagcacgctagctaaaacaagatgctcgcataccaacagttatttcgcacttctgtatgcaggattggctagccatctccctcgcccaaaagacttggtgaagtacgctgagagctgcatgtacagccccatttaccgttcttatagatgaagtgatgctcaccttagtgtacagcttcatttggctacagcatgctgtcttgtattacagtaataatttgcggttggacctatatcgtacggcagtagcattttatccctgaactgtgcttgtacatatttgccctgtcatcatgtaataaataacccaagtctgctattgcagaatttggttcag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0743500, RefSeq:Os01g0743500