Os01g0743600

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Revision as of 04:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0743600| Description = Peptidase S16, lon N-terminal domain containing protein| Version = NM_001050755.1 GI:115439880 GeneID:4326165| Lengt...")
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Gene Name

Os01g0743600

Description

Peptidase S16, lon N-terminal domain containing protein

Version

NM_001050755.1 GI:115439880 GeneID:4326165

Length

9256 bp

Definition

Oryza sativa Japonica Group Os01g0743600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32834564..32843819

Sequence Coding Region

32839051..32839198,32839648..32839790,32840346..32840551,32840707..32841232,32841341..32841442
,32842160..32842225,32842298..32842410,32842697..32842774,32842848..32842933
,32843595..32843734

Expression

GEO Profiles:Os01g0743600

Genome Context

<gbrowseImage1> name=NC_008394:32834564..32843819 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32834564..32843819 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagccggactggatcctggagagggagcggaggcaggtggagcagatcctggagcttgacatggaggagctccaggtcgaggaggtcgacgacgccggctcatcctcctcctccgaagtcgacacctttctcagaaacactcatggggatggaggatctagaacttctgaagcacttgcattcaatacgtctgtggtttcgctgcccacctgtgatggtgaggttcatgatgccccaggcagatttgctttcttggatggtggtgtggttctctgtttaccaatgttttatcttcaaggtgttgttttgtttcctgaagctatcctgcctattagagtagttcagcctagatctttgacagctgttgacaaggctgtcaatcatgttgacgctccatgcatgataggtgtggttcatgtttatcaacacactaatgatggacaccatgctattgcttcagttgggacaacagcggagatacatcacattaaacaacttgatgatggctcatcaaatgttgtcacacgtggtcagaaccgttttcgccttagacgccgttggatcgatgctgatgacgttcaatggggtgaagtacaaattatcgaagaagatacacctcagagaactccaagagatgcatttggccagttagctacaaattatattttcaaccagtgtggcacatcgttactcagtttgggtacatcttgtttcagacaagatgatcatgtgaactctgatcaagattgggattctctatcatccactagtacttcaagtgaacattcagtaacagatgcaagaacatactgttcctcaaatgaagatgaagatctcatgcttgaacagtcttggcagaagtatgattctgtgaaaagaaatgctgaattagagaatccagtcaagcatagcaacacaagaggcaagggtgaaccttgctttcaatccccaaaatctttaccaacaaaaaacaaaggtgctgaacaacgcaggcggttctgtgctgcttatagttcaaagctggcattgcaggctccattgtcattttggcctcgctgggcttatgaaatgtacgattcatattcccttgctcgcagagtggcagatttgtggagacaaatagttgtaaatccaagcatggatgattatgtgagaaaaccagatattttgtcatatcacattggaagcaaacttcccatgtcatgttctgtgagacaagaattgcttgagatcgatggtatctcatatcggctacagaaagagatccagctactcaaggcctttaacatcataagatgcagaaattgcctggctcttatctcaagacgtagtgatggccctgtcggtgcttatgtcaagcagttcagctgtgggcaagagatgatgacagtgtacaatgcaactggtcttgcactccgtggcgctccttccaaagctcacagtttgtttccaggttatacgtggacgattgctctctgtgctgcctgtgagtccaacataggctggctgttcagggcggagaagacaaatctgcttccaaaatccttctggggattacgcagctcccaagtttcagatgacacacaatcaggacataactga</cdnaseq>

Protein Sequence

<aaseq>MAEPDWILERERRQVEQILELDMEELQVEEVDDAGSSSSSEVDT FLRNTHGDGGSRTSEALAFNTSVVSLPTCDGEVHDAPGRFAFLDGGVVLCLPMFYLQG VVLFPEAILPIRVVQPRSLTAVDKAVNHVDAPCMIGVVHVYQHTNDGHHAIASVGTTA EIHHIKQLDDGSSNVVTRGQNRFRLRRRWIDADDVQWGEVQIIEEDTPQRTPRDAFGQ LATNYIFNQCGTSLLSLGTSCFRQDDHVNSDQDWDSLSSTSTSSEHSVTDARTYCSSN EDEDLMLEQSWQKYDSVKRNAELENPVKHSNTRGKGEPCFQSPKSLPTKNKGAEQRRR FCAAYSSKLALQAPLSFWPRWAYEMYDSYSLARRVADLWRQIVVNPSMDDYVRKPDIL SYHIGSKLPMSCSVRQELLEIDGISYRLQKEIQLLKAFNIIRCRNCLALISRRSDGPV GAYVKQFSCGQEMMTVYNATGLALRGAPSKAHSLFPGYTWTIALCAACESNIGWLFRA EKTNLLPKSFWGLRSSQVSDDTQSGHN</aaseq>

Gene Sequence

<dnaseqindica>4622..4769#4030..4172#3269..3474#2588..3113#2378..2479#1595..1660#1410..1522#1046..1123#887..972#86..225#gaggccggaaaactctttcgccgaccttccccacacggcttcaccctaagccagtgagcccaggcggcggcggcggcggggcggaatggcggagccggactggatcctggagagggagcggaggcaggtggagcagatcctggagcttgacatggaggagctccaggtcgaggaggtcgacgacgccggctcatcctcctcctccgaagtcgacacctttctcaggtccaaacgctaaactcgcttctcctttgccatttccgctatccacccatggtttgcttaaaccgtgccttacactgttacacatttcggtgcgggagttggctttcgcgttgatacggcgagaggattgacgccgcgagagctgctcgttgctagcaactattctgaaatgaaatcaaatgttaagttgcgccttcccaaagtagcctgaatccagacagaggccatggaggttagggttggggaattttccacaggttaggatgaaaacagattagacaaccgcttgctaggatgtagaagttagacccggtttgtttaatgcttgtggctttccccaagttaatttgttcatcccatagggcatttccacactatttgaatagattgcacaaaatctactcagtttggcatcgtatggtacttagattttgctgatataactcagcaattcatgattttgctgacatgttttgggttttatggagtgatgaggtagtttacatgttacttacgttttcgcttaactaccattaatggtattcatgatggaatgtgcctttccccaacataccatacagtctaaatttttcacccctcaagttcgttggtaatcaacagatgtaattttttgccacttatttaattcttatttttacagaaacactcatggggatggaggatctagaacttctgaagcacttgcattcaatacgtctgtggtttcgctgcccacctgtgatggtggtaagcattcatgcttatgttagtatatttcctgattctagctgcaacacttacaagtttgtttccgcaccagaggttcatgatgccccaggcagatttgctttcttggatggtggtgtggttctctgtttaccaatgttttatcttcaaggtagcattcctataaccctgtgttccaacataatagtatagagcttatctcaatctaagctttaaacacccaattcaatctcaagtgttgttagctgatccatgtcgtgcctaatattgaatgctgaacttgctaaagttgtgtcctattgcaaaccaacaaagtatacatgacatgtacgcatccttgccattctttcatcttactcttgaacagtcacacatttagttggcatctgtaaacatagctgcctgtattaaaggctaatagtttgcaacttttgcaggtgttgttttgtttcctgaagctatcctgcctattagagtagttcagcctagatctttgacagctgttgacaaggctgtcaatcatgttgacgctccatgcatgataggtgtggtgcgtgtcacttgtccttgttctgctgcctttgttctagctttgtttttaatggcaattctccaatgtcaggttcatgtttatcaacacactaatgatggacaccatgctattgcttcagttgggacaacagcggaggtgtatttttcataaagctcattcaaactagaatgatatctgtgccttgaagtttcatcttgcatatttgctcatttctgaatttctgttgtctgtgttatgtttcccttttgcattttaatcttctgatcctccttttggtttcttttgtgacctattttgctgcaaaaacaccaaactaagatagagtttgcagtggtcaggtagtaaggtcggacaaaaaaaaaactaaaaaagagaaaagttatatgcttgtctgagatagcgtttgcaaatacccatgccattgaaaagatatacatcaattctgcagaaagagacgatgaattatcacaggacctgtccattcatttctagatatcacgtagtatgcacagctatagttgactgcagtcacaaatgtcttactaggacatcatgatcaccatatttgatcttatctgtgcggttatatgttgttccttctagttctatgctgcacaataatacaatatccttgggcacaaatatgcactacacacatgatcttcatattatagatatgaacttctataaattttataaatgagcccaacagatatgaacttgatcatttgaaatatggctgaagttatctttttccttaaatcatttatcttcaactgaactgtgaagcagtgaaattaataatttcttctggatagtcacatcagcttttgattttgttttatgtcatagatacatcacattaaacaacttgatgatggctcatcaaatgttgtcacacgtggtcagaaccgttttcgccttagacgccgttggatcgatgctgatgacgttgtaagttctaacatttggttgagaaataagatgttctgaactgcaaatgattgtcctatgaagtagtggtaagagagcatataattccattttattaaccatgggcagcaatggggtgaagtacaaattatcgaagaagatacacctcagagaactccaagagatgcatttggccagttagctacaaattatattttcaaccagtgtggcacatcgttactcagtttgggtacatcttgtttcagacaagatgatcatgtgaactctgatcaagattgggattctctatcatccactagtacttcaagtgaacattcagtaacagatgcaagaacatactgttcctcaaatgaagatgaagatctcatgcttgaacagtcttggcagaagtatgattctgtgaaaagaaatgctgaattagagaatccagtcaagcatagcaacacaagaggcaagggtgaaccttgctttcaatccccaaaatctttaccaacaaaaaacaaaggtgctgaacaacgcaggcggttctgtgctgcttatagttcaaagctggcattgcaggctccattgtcattttggcctcgctgggcttatgaaatgtacgattcatattcccttgctcgcagagtggcaggtattgaattatttcactacagctatttcaatccgttttgtcttgtattcatgcattctttagccaaataatattctttcccactggctaacatgtcatttgttactatgattaagatgtgatgtatgcatgacattaaattggttttgtggcagatttgtggagacaaatagttgtaaatccaagcatggatgattatgtgagaaaaccagatattttgtcatatcacattggaagcaaacttcccatgtcatgttctgtgagacaagaattgcttgagatcgatggtatctcatatcggctacagaaagagatccagctactcaaggcctttaacatcataagatgcagaaattgcctggtaatgattaattattttttaaaatgtgattccactgaagttctgatcataattcaagcttatttttccaattatccggtgttttaatcttgattgctgcagtttcacacttgcacttggctataacttgtgggcttacctgtctttggttgctgtcgcaaacatatggtagagttgtagttggtttgctacaccataccatggctgcaggataagcaatagtaacgatatttaatcataccgcttcatccagatatctgttggttgttgcctgtgttttaaacaaccatggtaccatactaccaggatttccgagagacagggttttgatcatcaaagcacactagtattctgatttacaggtgatatctaagtcatgattcagttctctgaatcattatgtaaatgacaaagggacatgttcttttaatcgcttcttctctacctctaaagggctggatctcactggttgatttaaactggatttgtaacagaacttcttggaatactttcaagttttgactaatatggcaacaattccatttcttgtcgcaggctcttatctcaagacgtagtgatggccctgtcggtgcttatgtcaagcagttcagctgtgggcaagagatgatgacagtgtacaatgcaactggtcttgcactccgtggcgctccttccaaagctcacagtttgtttccagggtatgattctaatatattctactaaactctattactcaaaaaaggtttgaaatccagcctatcattaacagaagaaatgaacattgttattcgttctgtttgatcccgttgttacttgcaaatcacaggtgttcagttagcagcaatttcctgtgttcttccatacgcaactatcatacctgcactctgttattacctccattctaaaatataaaagttttagggttaggcacatgcattaagaaagtggatgaaattaaatgaggaaagattgtgtttggttaagaaaataaagtaggtggtgatattaaaaggtgaaaagttgtaattggttgataagataatgtagttaaggaattatattttggaataaattttgaatgttagaagttatacttttagatggggagagtatacgctgctaacacaaagacctgtattttttgcagttatacgtggacgattgctctctgtgctgcctgtgagtccaacataggctggctgttcagggcggagaagacaaatctgcttccaaaatccttctggggattacgcagctcccaagtttcagatgacacacaatcaggacataactgaaccttaacagtaagtcagggccccattttgtaattcgtataggtctgcctttaatttccttataagattcttttttttttcaccgggaaggccgaaggaggccaaccgaatatattaacaagaaataaaagttacaagagaaaaaacatcaaaatgcaccaaggtgcattgccacacaccacgcgctaccacccaagcacaaaccgctgagggtgaaacctagcaccaaacgaccctcgctgagcgtggccgaacgccgctaggcctacggcaacaccacagagacgaggcttcgaaaaacgatgccaccatggtggtcacgacatccaggatgccgccatcgcccatctaaaaagatgtggtttttacctagagaagctcgccaagaaagggagagggtaaccctcgacaacgctccaaggagattacgacgcccgaagacgtagccgctgccggcccggtgaaccaccggactaagctttcgcctgggaccctacgaccttgactgcagatcgccgtccaccaactcagaaccaccacacggacaaatggcagcacgtggcatccaccacaccgcaccgacacccctccgtcggtcgacttcaacgaaccaccacccctgaaaactggcccaggactcctccgttccaccacccgccggccgcctcgccatatttggccgaaggagaacccgggactaggtggcattgcttcggcagcctgagcttcccccactgacgagctgccgcctcaatccaacctagaaactccccgcaaagaaggggaggagctccacgaaggctgagggtgccgaccggcaacgaggaagacgacccaccgccgctagctccctttgcactgccacttggccgccagtggtgctgctgcttcggaccggcgccacccgccggcgcccgcgaagtccggccgccgcgcctcacctggccaccgcgacggcatcccggctgcccagccaccacgccgagtcgccaccgaggcctggatgacccaccgcgccatgggctggcgccgggcggccaggccgagcgagtgagcgggggcgccgccgccgctccgggcaggcttagctgcccgccgcctccgagcgcccgccacctccgcgacccggccggccacgacgagccgcggccatccgccgcctgcgcccgccgctgacgaaccgcctctacgccgagccgcagctgtccgccgcctccgcgcccgtgccgggccggcctagccgcagccggccgccgcctcgccgccttgccaccggccgccaccacgaccgcatgccgtcgcgccacctcaggccttctcgcgccgccgccgggcagatccaggcgagggagggccggatccggccatgggggctccggatccgccgcctcctccccaccttgccgccgtagccgccatggaccacaccggtggggagcttcgtcgtcttcgtccttcgcgccgaggagggagacgctacgaagagaagaaagcctcgccgccaccttccctgcccgctgctggcttcgccgctggcgggctccagcggcggcgaggtggggagagggagggagagaaggcgcgggcggctagggtttttcgcccccgagccgcccgacgcgagagcgacgcggggatcaggtttttcccttggctcttttctcccctccttataagattcggtatgctagctttgctaatcgtgcggctttcttgtattagacgcgagagtttgtcaataacatagatgcctgcgtattaccccacttatcgtgccccagctgccatggtccagcatctggcacatgcccagaaaattgtacatatatcacagaatgtgccttgatgctttcgttaaaaaatgcaaaaacaaacatgttcatccgtgtgtggatagtgtatacacctttgttgcaatcgtacgagcaatgccatatacaaagtaaaatcatactgaaccaaattctgcaatagcagacttgggttatttattacatgatgacagggcaaatatgtacaagcacagttcagggataaaatgctactgccgtacgatataggtccaaccgcaaattattactgtaatacaagacagcatgctgtagccaaatgaagctgtacactaaggtgagcatcacttcatctataagaacggtaaatggggctgtacatgcagctctcagcgtacttcaccaagtcttttgggcgagggagatggctagccaatcctgcatacagaagtgcgaaataactgttggtatgcgagcatcttgttttagctagcgtgctaatgaaccacatcaaaaggaacaaatattaccaaggtcataggcttttgcagcaacgcgggctgcgatgttggctgatatcttcctgatgcaggaaaagggtggataaataaggcctttgtcaacatgctctggggtcacctggtcagctaagccttcagctgtccaatgccatgaaggcaaaaacaaaacaagcaagaaaacaacaatagcgtggttagcacattagtaaagtggatgggaaaaaaaactcttgggctcatatagaatgcatttaccagcagcaaggatcatttcatctttcacccttatcgctcctgaaatcactacgcctaggccaaatcctgggaatatatatgcattgtttgcctattcaaagggtaaagagtatgtttaaattgtcaaaaacctgagaactaaaattcaggtggggaatctctcccctccagtgatttatcaaaaaaataataataattgagaactgcacatgtcgtgcgcaaaggtaatatccctaacctgtgcaggcacgaaaagcttgtcattgtatttaactggatcaaatggacttccactcccaaatattgcacggccctgcatgatgtatcatttgataagttataaagcataaatgcttgtgacataatttacagaagtttatagttcatatatgtgttgatctcaatgggatagatcatagatggcgtgaggttgcacatggaatatcaccttactccatgaatatgcctgttcagcagtacattcagattgtgatgttggattggatagtgcgaggatgattggtctctgcattatattggaaccaagctttcagttcttgaatgtgtcattaatgtgacttattatgagtcaattatctgaagaggtcaatgattttattgttacctcattaattgaactcatagcctcaatcacctcttttgtgaaactttgacccacaccagctgaacctatcaatgcagtcggtttgataacctaaaaagatacaaatcagtctagtgtggtggtgcctgaaagaaaaatgtatactgatataatatgcatctcttatggttcaagttttgcaccttaacagcatccagtagatctttgactggttcatgctcatgggcatatcgcttcttaaagggctgaagagaatctttacgtgaactgacaatcaacccctgcaatgcataaatcaactctcaatggtccaattaccaaaggatgcaagttaacactgcgatatcattattatattaacctttgaatcaagtagccagatctttttgcgagcatcttccactggaactttggactgaaaaaaaatcatagctaacgattaattgagccatcatagacaaattaccaaaaatcaaattaggtgaagctagcaatcgagttacctgatttgatatctcgagagccactagttcagcaatgcctgtaccagcctgcaagaacaggtaatctatttggaacaatctataggttttacatgatagaacaaatttttgctcgtcggtgattaagagtcaaatcactaatttactggtggcatgcttagattattcactattcaagcaaaaaaaaaaacttttttgcatctcaactagcaagaaacagaaaaggtttctgaacaactgaagttttgaattgtgataagtcctattcctatggctaaccaactctactgataggataatcagtccaactatttatgttttttttttgttactgactatcttcaattattcattgctacagttatgacaggaatgtaaaagcaatactcaatgtatattcttataatacaatacgcgatgtatagatggatgttcagagttcagacatgttgcagcagtctaaagtaaatgtgagcaatgcagaatgcaccctccatatcactgaaagggaaggtcagcttacctctcctgcgccaaagaataagaatgtgtgatcagctaaagtcccactgacaaatttctgagcagcaatgaggcctgcaagcactacagcagccgttccctgtttacaccacagtttcatggtttactcctattgttgtgaaacccagtataaatgcacattcactagttcgctttcatttaggaactgtaacgagaccaatacgaagagtaaaaaagtgagatctgaacctactacctgaatatcatcattgaagacaagattgtttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0743600, RefSeq:Os01g0743600