Os01g0747700

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Revision as of 05:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0747700| Description = RNA-binding S4 domain containing protein| Version = NM_001050770.1 GI:115439910 GeneID:4325544| Length = 4621 bp| D...")
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Gene Name

Os01g0747700

Description

RNA-binding S4 domain containing protein

Version

NM_001050770.1 GI:115439910 GeneID:4325544

Length

4621 bp

Definition

Oryza sativa Japonica Group Os01g0747700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33044021..33048641

Sequence Coding Region

33044090..33044189,33044276..33044385,33045453..33045584,33045669..33045742,33045809..33045914
,33046016..33046084,33046441..33046505,33046613..33046711,33046896..33046995
,33047816..33047878

Expression

GEO Profiles:Os01g0747700

Genome Context

<gbrowseImage1> name=NC_008394:33044021..33048641 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33044021..33048641 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgtctcgttggcgagccctttccggcgagtccttcacgtccctttcgcacgccgcgctatccccacatcgtaccacttcttccctagcggacggtgtcacgcggctctctccttcgccgcggcagcagcaggagattcggcggttaaggcgagcttggataggaatgcagccgaggaactcaggagcatcctggatatggcacaaagggcttcccaacggagagatgttttccacaccaattttcttactccacctatagtgaaggagtgcatgctggcaattgagaagttagcagacatcaaagcggtagcacaggggggctacccacaggctgagcgatgccgagtttcagttggacatccggactgtatgacaagcaacccagatgtagttgctgctttgagcatctcagggaatttcagattggaaccctgttctcatggtgactttcttggtgctattcttgggacaggaataacaagggataaagttggagatatacttttgcagggagagagaggtgctcaggtccttgttgatcctgaacttgttgactatctgacttccacacttgaaaaggtggggaaagttggagtttcatgcacacagattcctttgcttgctctagaatatgaaccaccaaggaccaagtcatttaaaactgtagaatcatcactcagggttgatgccctgggtagtgcaggatttaaaatctcacgtacaaagcttgctagcttgatcagtgctggggatgtccgtgtgaattggtcaccagtttcgaaaaatggagtgactctcaaggctggggatgttgtttctgtcagtgggatggggagattaaagattggggaaattgtgactacgaggaaaggaaagtacgcagttgagctgattcgatatttgtag</cdnaseq>

Protein Sequence

<aaseq>MAAAVSLASPFRRVLHVPFARRAIPTSYHFFPSGRCHAALSFAA AAAGDSAVKASLDRNAAEELRSILDMAQRASQRRDVFHTNFLTPPIVKECMLAIEKLA DIKAVAQGGYPQAERCRVSVGHPDCMTSNPDVVAALSISGNFRLEPCSHGDFLGAILG TGITRDKVGDILLQGERGAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEYEPP RTKSFKTVESSLRVDALGSAGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDVV SVSGMGRLKIGEIVTTRKGKYAVELIRYL</aaseq>

Gene Sequence

<dnaseqindica>70..169#256..365#1433..1564#1649..1722#1789..1894#1996..2064#2421..2485#2593..2691#2876..2975#3796..3858#gccgggcagaggcaaaggggagaacgagcaggcgacgacggcgcccagccccatcggttcctggtaaggatggccgccgccgtctcgttggcgagccctttccggcgagtccttcacgtccctttcgcacgccgcgctatccccacatcgtaccacttcttccctagcggtaagccccgtacccaccgctcggttcgattccggttaggtccgacgattctgacgcttggctacccatggctcgttgtggtgcaggacggtgtcacgcggctctctccttcgccgcggcagcagcaggagattcggcggttaaggcgagcttggataggaatgcagccgaggaactcaggagcatcctggatatggtagtttgttttccaccattaaacctcaattattaagatcaacttgttgagattactagattaggtggtttataggagtgcaatttgttgcttatggacgttgtgtctgatgaaatgccttcatggttaaatcattccccccccccaccctgataaacgatttcacaaacaattatgagcttcagtttatgtactccatcgagtgaattttgccactatgagcacattggtctcaaggaaataaagaaaatgctttgtgttttagttgttttgctctcggcacatcagacacattttttctttttttttatggcagatcaatatattgacccggctttagaaaaaagcccaagaacaataacagagtcttatacaagaactggaaaataaaagaaacacaaaaagatagctggggaaaccagttttccagagacaaaaggaacgtactcccaacctaaccacacccttacagaaaaaactgaaactcaggctaaagctattctatagcgatgcaggtagcacatgaggcctgacttgattcagttttatcctgattgcttcacaccatcctcccagcagctcctggtcttcctcctttagcaaaatgtgccacttctgtatgaaagagagcgatttataaaccacataaaggggagacttgacaagaatattttcaaacacccagtcgtttctaatgatccaaatagcccaacaaacccccccaattaaagagatccaaggtttaaactttttcctatctttgagcagactcatacactcccatagattattaggtaaagaaaccagattcaaagcatccctaataacacaccagccaaaaacagctaagggacatttaaacaagatatgattagtagtttgccacatcagacagattcactcactattgttttgctgattgcaaacataacctttcaacaacattgaactagtttgcttttgtaactaaccacaaaataagaatgtttcaagttgtaagtgcagtatttcatgttgatatggtgccttgaacttcatgaatttatgatggtatccaacttatgcaggcacaaagggcttcccaacggagagatgttttccacaccaattttcttactccacctatagtgaaggagtgcatgctggcaattgagaagttagcagacatcaaagcggtagcacaggggggctacccacaggtgaatttgagtaacatcaaaggaaattgttttattagcttccattacctaatctgtcccactctcacctgttcatttatctaggctgagcgatgccgagtttcagttggacatccggactgtatgacaagcaacccagatgtagttgctgctttgaggttctctcaaatttgcactataagcagttccatcttttatataagctaactttgaggccttctcagcatctcagggaatttcagattggaaccctgttctcatggtgactttcttggtgctattcttgggacaggaataacaagggataaagttggagatatacttttgcaggtgcacatgccttcccaatcgcttaatttctggattgtgttgtgaactttgacttttgtccgtctgaggtgcctctttgtgatcttttttttttttgtcagggagagagaggtgctcaggtccttgttgatcctgaacttgttgactatctgacttccacacttgaaaaggtgagtttatatatgttatataatttcttacctatatatgacacagaactacagaagttataacattatcttaccccacatgttttcacttatgttgattacatgctatgcagacaacagaagctctgaagctactgtgttttttattatttttttttactcatagcacatttaaaatagcagcacatgttccaatatttttgtggttatttgcatcgtagaataactctctagattagttacatgttagtcttgtattgatctaactctgcccatgaactttgactgctgtatttttgttgttatttcaaacccttgcaaatgcagcttactctgaattgtgtttgattcaacaggtggggaaagttggagtttcatgcacacagattcctttgcttgctctagaatatgaaccaccaaggtttgcttgacatctgatctcatctcaaagttggctcatttttatttatttttggataaatgcctggacaaagatactcaacacttaaaagtacctttgaaccacaggaccaagtcatttaaaactgtagaatcatcactcagggttgatgccctgggtagtgcaggatttaaaatctcacgtacaaagcttgctagcttgatcaggtaagatttgtgagctatccatcttcttaggttcattaaaacatctctttatcttaacatcagtggtttactgtgggttatcttcccttctaccttggatggtgccatccacgcattattttgtttaattaccgctcataaagcaattgatatatgtatccaaatctctcttttgtttgtccagtgctggggatgtccgtgtgaattggtcaccagtttcgaaaaatggagtgactctcaaggctggggatgttgtttctgtcagtgggatggggagattaaaggtaaaaaattatatgcaatcaccacattaatagacgacttctaggataaattttgatgttgcaattggcgcgtaaggtattccacgaatggggttaagggaaaaggggcattcaggtgtttgccactccaaagaatgacgttcaagaattcccattccatgcgccattggcatgtaggtcttgggccacatgcctgtgacacagggcatgtccttttttctgaaatggaacttttggagtgttatatatatttattacttccttacaaaaatatattggtgcttggatctaaatcactacatcaattaagttggataccattctgcttttgctttgtattgtttcaacctgagaatacatccaaaactataagattttgtattgttgtgaaactatgagctcaaaagtttcaaataataaagccacagcctttactgtgtactgatgttgtgatgttcatggcgtcgtcttcttttttgttcattctgagcaattgtcataacggcttcattgttgtagactgtcctataggctgcatattactttagactaatgttgcaagaactatgtggatcagacctccagatgtacatcgataaagtaaatgctttgctttgctgaaaataggattttatgaatcaaggattatgtgttaatttgcaaatacataatatgagggaatataacatgctatggaagatgtttgaatgctactagatgtatatttctttttaaaaagttatgaattccctattcacttgaatctatatcaaccagttctatgcttgacttgtttaaattatttattatttatctctagattggggaaattgtgactacgaggaaaggaaagtacgcagttgagctgattcgatatttgtaggtttgcaagggataaatggatctctcaagattactgactcaaatgaacggtatggattattaaatagcaaaaatgtcacaattactatatttttcatattcactaagttactacttcagctttgaataggattttttttttctcggaggtccacttatatagctcattggtatagatccagactttcacataagaagctcacaggttgcttctagtatttaatgtggtcatattatcacccattcatcattgagaagtagaaaagagcttactctatattattgaaatagtatttttgttgttgttgttgttgtgtatgcttaaatttgtactacagatttgcactcgtctataatttctcatatattttgatgagggagtttttttcatatgggtctattattatgcaggactcaaatccttttttaactgcaacttccgtgagggcttgttctgctctgagaccaaaaaacaaggtttgtgttttaaaaccaaaaggagtttcgcaaattcattacctaactttgcctactgcataacgtagcctattctatattcatatgatcaagtgctaccatggccaaccatgaaacatgtgacttcgattatgacaagatggaggcaagctgtttattgggaaaactgatgacgactagtcatatattcagcgcccttttaatgctaaaaagcttgacaaatgacaacggctattctttgtatcacaaaactatcacaattcacaagattcagtttttcaagttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0747700, RefSeq:Os01g0747700