Os01g0748000

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Revision as of 05:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0748000| Description = Dynamin family protein| Version = NM_001050772.2 GI:297597610 GeneID:4325546| Length = 5257 bp| Definition = Oryza ...")
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Gene Name

Os01g0748000

Description

Dynamin family protein

Version

NM_001050772.2 GI:297597610 GeneID:4325546

Length

5257 bp

Definition

Oryza sativa Japonica Group Os01g0748000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33063475..33068731

Sequence Coding Region

33063475..33063632,33064441..33064568,33065260..33065917,33066484..33066679,33066757..33066984
,33067085..33067513,33067631..33067837,33068030..33068221,33068360..33068731

Expression

GEO Profiles:Os01g0748000

Genome Context

<gbrowseImage1> name=NC_008394:33063475..33068731 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33063475..33068731 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaacgcgttctcgtcgccggcgacggggaggacaccgaaccctaaggtggcgccgtccccttccaccagacgggccgcagactccgccgcggcggcggccgccgccgccgccgcggcgtcggactcaaaggcgcggttcgaggcgtacaaccggctgcaagcggcggcggtggcgttcggcgagaagctcccgatcccggagattgtggccatcggcggccagtcggacgggaagagctccctcctggaggccctcctcggcttccgcttcaacgtccgggaggtcgagatgggaacccgccgccccctcgtcctccagatggtccacgaccccaccgccctcgatccacggtgccgcttccaggaggaggactcggaggagtacgggagtcccatggttctagccacggccatcgccgacctcatcaagcagcggactgaagcgcacctcaggaagatccaggccgcagtctcgcccaagcccatcgtcatgagggccgagtacgcctactgccccaacctcaccatcattgacactccaggtttcgtgcttaaggctaagaaaggtgagccagagagtactccagaagagatcctgtcaatggtgaagtcgctggcgagcccacctcatcgcctccttctgttcctccagcaaagcagcgttgagtggtgctcatcactctggttggatgccatcagagatattgatcccactttcaggcgcacgatgatcgtcatctccaagtttgataaccgcctcaaggaatttaccgaaagttgggaagtcgatagctacttaagcgcaagtggctaccttggggataatatacacccgttcttcgtggctcttccaaaggatcgtggaacaatctccaatgaagagttccggaggcaaatttgccaggttgatatcgatgtgttgcgtcacttgagagacaatgttaagggtggcttcaatgaagagaaatatggaccatacattgggttcagttgtctcaagaagtacctggaatctgaacttcagaagaggtacaaagaagcagctccagccaccctggcattgttagagcagagatgtagtgaagtctcaatggacctatccagattggactccaaactgcaagctacatctgatgtctctcagctgagaagatcagcgatgcttcatgctgctaatatctgcacgcatttgcgctcactacttgatggagcagctgatccagcaccagagctatgggggaaaactactgaagaggaacagatgcatagtggtataggcagctggcctggcattaacatgcctgtaaaaccacccaactccagtcttaaattatatggtggtgcagcttttgagagagtaatgcatgaattccgctgtgcaacatactcaatggagtgtccacaggtttcaagagagaaggttgcaaacatactacttgcacatgctggacgaggtgggagtagtgggttgactgaggcagcagctgagatagcacgtgcagctgcacgatcatggcttgctccccttatcgatacagcatgtgatcggcttgcatttgttctccaaagtctatttgaccttgcaatggagcgatgccgctatcaagactcaaaatatcatcaaaatgttgaagatatggatggatatgttggcttccttgctgctcttcgctgttcatattataagtttgtcaaggaattgtccaagcaatgcaagcagatagtgagacatcatcttgattctgttacaagtccctactctcatatttgttacgagaatgacttccttagtggtgtcgggtctgtggcaaactccatgcataggtttaaccacttcccgggagtcacatcttttgacctatcagacagcggttctgcccttgaagaagctcaggagaatgtgccaccaaaggatcgtcaacatatgacaccacctgctaaaggaaatgagtcaaaggaagttcttagagaaagccagctgacggttcctgagacaccttctccagatctgccagttgatatgaatggtggcaagaagaaagacaacggaaacttgaatgatggtggtgcaagaaaaagacatgcaaggatggcagcatatgcaaacaggaatcatcataacaatgtgattggtggtgatgacctgggctcaaaatctggatcatcatactccagcatatgctcaatatctgctcagtatttcgccaaaatgcgggaagtcctgattgaaaggaatgtaccctctgcactgaactctggattcttgaccccatgtcgtgagcggttgtttttggcacttggcttcgagctgtttgctgttaatgacgatagattcatggacatgttcgtggcacctggtgctgttgatgctatccagaacgagcgccagtctctgctgaaactagctcgttttgggagtaactggtgtaaaggtctagttctatttggtaagaaggacctgcctacttggctcacttgccgcggcaagagtgtttggcaggggctgtggaccacggtgagccagaccagatctgcttatcatgttcgtgctctacactag</cdnaseq>

Protein Sequence

<aaseq>MAANAFSSPATGRTPNPKVAPSPSTRRAADSAAAAAAAAAAASD SKARFEAYNRLQAAAVAFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGT RRPLVLQMVHDPTALDPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAAV SPKPIVMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLF LQQSSVEWCSSLWLDAIRDIDPTFRRTMIVISKFDNRLKEFTESWEVDSYLSASGYLG DNIHPFFVALPKDRGTISNEEFRRQICQVDIDVLRHLRDNVKGGFNEEKYGPYIGFSC LKKYLESELQKRYKEAAPATLALLEQRCSEVSMDLSRLDSKLQATSDVSQLRRSAMLH AANICTHLRSLLDGAADPAPELWGKTTEEEQMHSGIGSWPGINMPVKPPNSSLKLYGG AAFERVMHEFRCATYSMECPQVSREKVANILLAHAGRGGSSGLTEAAAEIARAAARSW LAPLIDTACDRLAFVLQSLFDLAMERCRYQDSKYHQNVEDMDGYVGFLAALRCSYYKF VKELSKQCKQIVRHHLDSVTSPYSHICYENDFLSGVGSVANSMHRFNHFPGVTSFDLS DSGSALEEAQENVPPKDRQHMTPPAKGNESKEVLRESQLTVPETPSPDLPVDMNGGKK KDNGNLNDGGARKRHARMAAYANRNHHNNVIGGDDLGSKSGSSYSSICSISAQYFAKM REVLIERNVPSALNSGFLTPCRERLFLALGFELFAVNDDRFMDMFVAPGAVDAIQNER QSLLKLARFGSNWCKGLVLFGKKDLPTWLTCRGKSVWQGLWTTVSQTRSAYHVRALH</aaseq>

Gene Sequence

<dnaseqindica>5100..5257#4164..4291#2815..3472#2053..2248#1748..1975#1219..1647#895..1101#511..702#1..372#atggcggccaacgcgttctcgtcgccggcgacggggaggacaccgaaccctaaggtggcgccgtccccttccaccagacgggccgcagactccgccgcggcggcggccgccgccgccgccgcggcgtcggactcaaaggcgcggttcgaggcgtacaaccggctgcaagcggcggcggtggcgttcggcgagaagctcccgatcccggagattgtggccatcggcggccagtcggacgggaagagctccctcctggaggccctcctcggcttccgcttcaacgtccgggaggtcgagatgggaacccgccgccccctcgtcctccagatggtccacgaccccaccgccctcgatccacggtgccgcttccaggtgcgcgtcccgcttcttcccctagggttcgcaaccctcctcgcctctctctctctctctctctctctctctctctctcggatcaagcctagccgagccaacggctcatcagccctgtgtttgtgcggcgcgtttcaggaggaggactcggaggagtacgggagtcccatggttctagccacggccatcgccgacctcatcaagcagcggactgaagcgcacctcaggaagatccaggccgcagtctcgcccaagcccatcgtcatgagggccgagtacgcctactgccccaacctcaccatcattgacactccaggtttcgtgcttaaggtaagtacaggtgaaattaggacttctcacaccttagtgaatatggttgcttgttaaattgagacttggcgtacctctatggagaagattgcttgttagattgtgacttctcatacctgaatgaagaagattgcgttggttgctctgtcagttatgttcttagttgatagaattgttgtgttatttttgtaggctaagaaaggtgagccagagagtactccagaagagatcctgtcaatggtgaagtcgctggcgagcccacctcatcgcctccttctgttcctccagcaaagcagcgttgagtggtgctcatcactctggttggatgccatcagagatattgatcccactttcaggcgcacgatgatcgtcatctccaagtttgataaccgcctcaaggtattccttcagaacaatcaacatgtgtacatagggtttgattacgtcttctctgtgagctatgatttgtactggtgttgtggcttatgaaaatgcctctgtcttgaccaattgaaggaatttaccgaaagttgggaagtcgatagctacttaagcgcaagtggctaccttggggataatatacacccgttcttcgtggctcttccaaaggatcgtggaacaatctccaatgaagagttccggaggcaaatttgccaggttgatatcgatgtgttgcgtcacttgagagacaatgttaagggtggcttcaatgaagagaaatatggaccatacattgggttcagttgtctcaagaagtacctggaatctgaacttcagaagaggtacaaagaagcagctccagccaccctggcattgttagagcagagatgtagtgaagtctcaatggacctatccagattggactccaaactgcaagctacatctgatgtctctcagctgagaagatcagcgatgcttcatgctgctaatatctgcacgcatttggtatgcaaagaagacacatcctatacttaccgtttccattctaaaggttgttgctaatttttgtgctggaactaattgaaattttactttcttaccatagcgctcactacttgatggagcagctgatccagcaccagagctatgggggaaaactactgaagaggaacagatgcatagtggtataggcagctggcctggcattaacatgcctgtaaaaccacccaactccagtcttaaattatatggtggtgcagcttttgagagagtaatgcatgaattccgctgtgcaacatactcaatggagtgtccacaggtttcaagagagaaggtatgttttagattcaagcacatgtctacaaaattttatgtgaaagtttgcttaatttgtggtactgatatcatcaggttgcaaacatactacttgcacatgctggacgaggtgggagtagtgggttgactgaggcagcagctgagatagcacgtgcagctgcacgatcatggcttgctccccttatcgatacagcatgtgatcggcttgcatttgttctccaaagtctatttgaccttgcaatggagcgatgccgctatcaagactcaaaatgtacgatctggatgcctgtggggttcatctcacttcctacaattacatggttactattaatcttgaaactgattttgaccatcttttatgattaatagaaataatttgttcagtgtgatacgagcagacaaaagacttgactattagtagtttctgttggccaacacacactactggcaaaatatatattccaattcttttcacaccaatggtctgcaattaatttaactgcattcctcaactctgtgatgtgttttttgctattacttgtgatcacgttgtccatgcaaaatttatatggtcaatcattttcatgggtgtttactggggggttagtattttgttgatattaatatggatcacttgtgtatatgtttatctattcaagcttttgatatttagctaatatatcatcttttcatttttatgttgtaagaactctaagagtatctcattaatttcatcgtttgcatggagttatagctgagccttagcatattttagaagtcaattggagtccaccaatttgttcaatggttctcatacttattatattttcctggcagatcatcaaaatgttgaagatatggatggatatgttggcttccttgctgctcttcgctgttcatattataagtttgtcaaggaattgtccaagcaatgcaagcagatagtgagacatcatcttgattctgttacaagtccctactctcatatttgttacgagaatgacttccttagtggtgtcgggtctgtggcaaactccatgcataggtttaaccacttcccgggagtcacatcttttgacctatcagacagcggttctgcccttgaagaagctcaggagaatgtgccaccaaaggatcgtcaacatatgacaccacctgctaaaggaaatgagtcaaaggaagttcttagagaaagccagctgacggttcctgagacaccttctccagatctgccagttgatatgaatggtggcaagaagaaagacaacggaaacttgaatgatggtggtgcaagaaaaagacatgcaaggatggcagcatatgcaaacaggaatcatcataacaatgtgattggtggtgatgacctgggctcaaaatctggatcatcatactccagcatatgctcaatatctgctcagtatttcgccaaaatgcgggaagtcctgattgaaaggaatgtaccctctgcactgaactctggattcttgaccccatggtatgcctgatctttcaattatgttatacacacattttgttgtctttcttctgttcagtttggtagttattcgaagtactacaattgatctattcgaccaccttatcacatccttaacccactgactgatgagtgtttgctgtcattgatgtttttatcttgctgagaacatatgaccacattaaggactttcctttgtgaggtgtgcttcaaacactttcataacccagaaattccatgttcaccatggttcctgtgacacagtatataggcagtgaatgagtaaaatatttggattttcaagaataaccatctgaatcactatgttgttaaaatgtactccctccgttcagattttaagactttctagcattgctcatattcatttagaagttaatgaatctagacacatatatatgcctagattcattaacatatatatgaatgtaggcaatgctagaaagtcttacattgtgaaacggaggaagtagaatactatatgtcataagtacagtagatagtcaatattagttatggaccgtatatatttctggcatagctgctagcctgctactgcacgtagaattgatagcgtggttagtagatgctagccttttaaatttgtgtgcttgtccagtacacgtgagttttgtccttccctgatatgtgtactccaacttatgcaatgcagtcgtgagcggttgtttttggcacttggcttcgagctgtttgctgttaatgacgatagattcatggacatgttcgtggcacctggtgctgttgatgctatccagaacgagcgccagtctctgctgaaacgtcaaaagattttgttgtcctgtttgaatgaattcaagaacatatcgcggaccctgtaacaaagatttttctggtgcctagtctacaggcatgtatgatgtatccaggagcttcagtatatccgtaaagatgatacatcggagttcctggtgagtttctactgctgtttggcattttttagctcaatgcttctgttcttaatgcaagtagtctttctgttgtcaaattccttattgacatgtcgtaccacttttcatctgttcaacattgataacctccttgttaaaaaaattggctatgattgagaattagattaaaaagagaacgtgtagatgatttgatgatctcaaatcgtaccagtgtgtgcacaactcctaaagaacacttatacaaatcatcttaagatacaacaccatcagtattgccctttttgctctgttgttttgtcattgtatatgcaacgggtggtctggttgggctgtttcttagtattaatttggagttgaggtgtgtatgggtgcaccatcgaaccgattcaacagattcggtcacgactcacgaggtgaagtgtgcaggtgtgtacttaataaattatacgccgttgttagttggagttgatgactccctgtatccgtccatttcaacgtatttcaactgtcctcctgtcatctgcatgaaaaatcgccgaggtcaggcaacatcttctgctttcgttcccatttctctttcatgctctcccactttctcccctttacccacaactgtattttcttgtaacttaagccattgtcctctgtcatacttcaagtagctcgttttgggagtaactggtgtaaaggtctagttctatttggtaagaaggacctgcctacttggctcacttgccgcggcaagagtgtttggcaggggctgtggaccacggtgagccagaccagatctgcttatcatgttcgtgctctacactag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0748000, RefSeq:Os01g0748000