Os01g0749200

From RiceWiki
Revision as of 05:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0749200| Description = Similar to 50S ribosomal protein L13| Version = NM_001050781.1 GI:115439932 GeneID:4325555| Length = 2356 bp| Defin...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0749200

Description

Similar to 50S ribosomal protein L13

Version

NM_001050781.1 GI:115439932 GeneID:4325555

Length

2356 bp

Definition

Oryza sativa Japonica Group Os01g0749200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33122903..33125258

Sequence Coding Region

33122998..33123222,33123784..33123969,33124251..33124421,33124895..33125014

Expression

GEO Profiles:Os01g0749200

Genome Context

<gbrowseImage1> name=NC_008394:33122903..33125258 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33122903..33125258 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctacggccatcgcagcctccgcgttcctctcctccgccttcgccagggacaggccgctcccccgccagcggcgcgcggcgaggcccgcgacccgccgcgccgccgcggggggcctgtcggtgcggtgcgagcagagcgagaagcagaagaggcagccgctctccgcgctcgtcccccgcgagcagcgattcatgttcgaaggcgacgagctctgcggccccgacatatggaacacaacatggtaccctaaggctgcagatcatgtaactactgagaagacatggtatgttgttgatgcaacagacaagattctaggtaggcttgcatccaccattgcagtacacatcagaggaaagaatgaggccacatacactccaagtgtggacatgggggcttttgttgttgtggttaatgcagagaaggttgctgtttctggcaaaaagcggtcacagaagctctacaggaggcactctggacggcctggtggaatgaaagaagaaacttttgatcagcttcagaaaaggattccggagagaattattgaacatgcagtgcgtggcatgcttcctaagggcagactgggaagaagactgtttacccacctcaaggtgtacaagggagcagaacatccccatgaggctcaaaaacctgttccactgcctatcaaggataaaagaatacagaagtctgagaagtag</cdnaseq>

Protein Sequence

<aaseq>MATAIAASAFLSSAFARDRPLPRQRRAARPATRRAAAGGLSVRC EQSEKQKRQPLSALVPREQRFMFEGDELCGPDIWNTTWYPKAADHVTTEKTWYVVDAT DKILGRLASTIAVHIRGKNEATYTPSVDMGAFVVVVNAEKVAVSGKKRSQKLYRRHSG RPGGMKEETFDQLQKRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGAEHPHEAQKP VPLPIKDKRIQKSEK</aaseq>

Gene Sequence

<dnaseqindica>96..320#882..1067#1349..1519#1993..2112#gaaacgaaatggcagtggcgttccactgaaccaggccaagccagacggacaagacttcgccgcagccgcgtcctcctcaccgcgccgccgtcgcaatggctacggccatcgcagcctccgcgttcctctcctccgccttcgccagggacaggccgctcccccgccagcggcgcgcggcgaggcccgcgacccgccgcgccgccgcggggggcctgtcggtgcggtgcgagcagagcgagaagcagaagaggcagccgctctccgcgctcgtcccccgcgagcagcgattcatgttcgaaggcgacgagctctgcggccccgtactaaccctcacctctctttctctctcccgtatacattcttctctttctcagttcagaaaatgaatagtaatgctacattccttggataaagggaaattttaccgtgatttaggattgccgcttatttaggaaagctcaagattagtcccattcatttctaaatccgtaagtcacttcatcttgctctattgggtcaaatcctttctttacatgaataatgttagggaaaatacacaatgtttttacatgttactataccgtatagaccaccatcttattttatttaaagttatctagttgtaatttattacgaaagaggattccataaaatgaactgaaaataacatggagggaacgttggtctttctgaattggtcgctaacattgtgttgtattactcaacagtgttcgcacctacatgactaccatatctttttatctgtggatgtttaggtttgtgaagttagaattcagtacggataccattcttgtgttctttctctcttttctgtgcaacctgttctgtgtagtgatcggaccaaggaatttaatttgcaggacatatggaacacaacatggtaccctaaggctgcagatcatgtaactactgagaagacatggtatgttgttgatgcaacagacaagattctaggtaggcttgcatccaccattgcagtacacatcagaggaaagaatgaggccacatacactccaagtgtggacatgggggcttttgttgttgtggtatgtatgtttcttgaaattaatttataaagttaaatagtgcacacaataagatcctctgtagtcccacaaaaggaaaagaggtttagcagcacatacaaataagcaccaaaaggtatctggaagctgaggtccacctgaaggcattttgaagctgatttcatgtatatatatttatgttactgtgtgcttttaatactaatgcatctctgaagagtaattgctacgcatatactattgtaagttcctgaactaccatgctgaactctatgttcacataggttaatgcagagaaggttgctgtttctggcaaaaagcggtcacagaagctctacaggaggcactctggacggcctggtggaatgaaagaagaaacttttgatcagcttcagaaaaggattccggagagaattattgaacatgcagtgcgtggcatgcttcctaagggcagagtaagacatcatctcttagagctcttatctagtcagtttcatcaagtctttttgaccttaagtcagcctacctgggtatacatatgctcttatccttatttttggtcaatttctaatacatatctgaaaatgggtatcctcgttctgttccattatacttcattattgtgtataattccccaactttatataccctgttcatggaaatattcgctctaattgaatgccgaaacggcgtgggctaacgaagtactagatgtattctcccaaaactcctatgttgcctgtaagacatcttatgattgcctaaagccttttacttatgcctaagttcatttataaaaaaaaaaaacgtttactatgtcaacctctcaagttctcatatgttagtgacactgacacatgtaatccgaccaactacagcggttgtacgtgctctatgtagccttctcaacattttgaacattttgcagctgggaagaagactgtttacccacctcaaggtgtacaagggagcagaacatccccatgaggctcaaaaacctgttccactgcctatcaaggataaaagaatacagaagtctgagaagtagataattcctgtggagactaagaaagacacaacaatctcacgtaaattcctcccctcgagattttgtccaatctttggaatgtgatgcatctgtctgtttggggaatggagtgtaaaattttttgtaatttacttcctccaaaagtttgtgtttctaagtcatagttcttgttgattacatatcatgtacctaataccgtacgattttaagcaatccgatatttccatatccaattgagtagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0749200, RefSeq:Os01g0749200