Os01g0749900

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Revision as of 05:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0749900| Description = Protein of unknown function DUF250 domain containing protein| Version = NM_001050784.1 GI:115439938 GeneID:4324622| ...")
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Gene Name

Os01g0749900

Description

Protein of unknown function DUF250 domain containing protein

Version

NM_001050784.1 GI:115439938 GeneID:4324622

Length

5157 bp

Definition

Oryza sativa Japonica Group Os01g0749900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33150759..33155915

Sequence Coding Region

33150957..33151387,33151495..33151667,33152440..33152525,33152629..33152678,33153186..33153253
,33153521..33153621,33153802..33153814,33154078..33154262,33154472..33154558
,33154663..33154757,33155097..33155223

Expression

GEO Profiles:Os01g0749900

Genome Context

<gbrowseImage1> name=NC_008394:33150759..33155915 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33150759..33155915 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggactgcgtcgtcgtcgagaatggccaccccgtcccgaaggaggaggacgcgccggtggtagccgtggagcgcctcccggagggcgccgggaagccgcgggaggaggggagtagagggcagaggaaacagggcgggatccgcagggagccgtcgttctcgcggtggtgcaaggactgctccgccatgtccaatgccccccctgggggcgcctcccctgcctcggcggccagcgacgacgattccgaggagttcgagcttccgcttctgccctccgatagtggcggcggcggcggcagccacttgccgatggatattgaggcgggggcagcggcgagatctgatgacctcccgatttcgccgtggttgatcgcgaaggttattgcgctaattgcgagttggtacacgctgagcacctgcttgacgctgtataacaaggagatgctggggaagcacatgtggaagttcccagcgccattcctgatgaacacggtgcatttcacgatgcaggctgtggcatcgagggtgatcgtatggttccagcaccggggcctggagggagcggctagtgcaatgacatggagagattactttctgcgagttgtcccaacagctttggctactgctcttgacataaatttgagcaacatttcacttgttttcatcactgtaacatttgctacaatgtgtaaatctgcagctccaattttcattcttctgtttgcctttttgtttaggctagagaagcccagctttaaccttcttggaatcatactgattgtttcctttggagttctactaacagttgctaaagagacagaattcaatctttggggatttgtatttattatgcttgctgctgttatgtctggtttccgctggtgcatgacacagattctcctccagaaagaggaatatggattaagaaatccctttacgttgatgagttatgttaccccggttatggcaataacaactgcaattctttctattgcgatggatccatggcacgacgtcagggcaagccacttttttgataattcaactcacataataaggagcagcttattgatgcttcttggtggtgctttggcctttttcatggttttgacagaatatgttctggtttctgtaacaagtgctgtaacagtgaccgtagctgggattgtgaaggaagcggtcactattttggttgctgtgcttttcttcaatgatacatttacctggttaaaggggcttgggctgggaataataatatttggtgtcagtctattcaacttatacaagtatcataggttcaagaaaggccatcgtaataagaattgtgacaagaacccccaaacttctagcggtgcttcaaaatatgttatccttgatgatgacgatatggaaaaccagggtaattcaggctga</cdnaseq>

Protein Sequence

<aaseq>MGDCVVVENGHPVPKEEDAPVVAVERLPEGAGKPREEGSRGQRK QGGIRREPSFSRWCKDCSAMSNAPPGGASPASAASDDDSEEFELPLLPSDSGGGGGSH LPMDIEAGAAARSDDLPISPWLIAKVIALIASWYTLSTCLTLYNKEMLGKHMWKFPAP FLMNTVHFTMQAVASRVIVWFQHRGLEGAASAMTWRDYFLRVVPTALATALDINLSNI SLVFITVTFATMCKSAAPIFILLFAFLFRLEKPSFNLLGIILIVSFGVLLTVAKETEF NLWGFVFIMLAAVMSGFRWCMTQILLQKEEYGLRNPFTLMSYVTPVMAITTAILSIAM DPWHDVRASHFFDNSTHIIRSSLLMLLGGALAFFMVLTEYVLVSVTSAVTVTVAGIVK EAVTILVAVLFFNDTFTWLKGLGLGIIIFGVSLFNLYKYHRFKKGHRNKNCDKNPQTS SGASKYVILDDDDMENQGNSG</aaseq>

Gene Sequence

<dnaseqindica>199..629#737..909#1682..1767#1871..1920#2428..2495#2763..2863#3044..3056#3320..3504#3714..3800#3905..3999#4339..4465#tcgggaagtcgccgagacgaggtgttccgattttgacttgctaccggaatcctcgctgaaagcaaaacccccatctcccgcggcttctcgtcggccgccgccgcggtcgctcgccgtcgccgatgagatccatccacgcctctcttagatccaaattgctgtagagccggcctcatcgccgtagcgccacccgcgtccatgggggactgcgtcgtcgtcgagaatggccaccccgtcccgaaggaggaggacgcgccggtggtagccgtggagcgcctcccggagggcgccgggaagccgcgggaggaggggagtagagggcagaggaaacagggcgggatccgcagggagccgtcgttctcgcggtggtgcaaggactgctccgccatgtccaatgccccccctgggggcgcctcccctgcctcggcggccagcgacgacgattccgaggagttcgagcttccgcttctgccctccgatagtggcggcggcggcggcagccacttgccgatggatattgaggcgggggcagcggcgagatctgatgacctcccgatttcgccgtggttgatcgcgaaggttattgcgctaattgcgagttggtacacgctgagcacctgcttgacgctgtgagtagcacgctttttttttggagtgtggatgattagggggagtatgtgcttgagcacatgtttgatgctggtgttctgtttgtgctcgtggggcgtgtgttcaggtataacaaggagatgctggggaagcacatgtggaagttcccagcgccattcctgatgaacacggtgcatttcacgatgcaggctgtggcatcgagggtgatcgtatggttccagcaccggggcctggagggagcggctagtgcaatgacatggagagattactttctgcgaggtgaccaaagtgtagcttactttatgcctcttgatgcttccacatatttagccagagaagtggcatgggattgggtagctgggcgctcaaattagtaaaatcaactttgggtattctggacttataggggataaataaattgaatgctagttttacgtctatgtttgccacacaactaataagtgacataagaagaagggtactctttagttagcctgttacaagatcaggtttaggaccagtcagcatgaacaatattggcttttgcagccttaagcaactagtgactattatgatagaacaattgacatgctaaatctatgataggacaattggcatgctaaatccatgatagaacagatgacatgctaaatctatgataggacaattggcatgctaaatccatgatagaacagatgacatgctaaatttattcctctcttattcaaatgaaatttgagctggtggcatgtagaaataaaagtggttaatgcgtcacacaggctcaaatagggagcttagtatacttctcttactgaatcttttatgatgttgagcaatatcacatttcttagtggatatgcaatcaatgctctaatagattgaaccgagtcaatcaacaaagattaggttaaaccagaatctatactacctgaaaatatttgtaaatatatattttccatttttattgttttgtatttttgtatatcatatttatttgaataacattgtttacaaatgatatattgtaattttattatttgttctgcagttgtcccaacagctttggctactgctcttgacataaatttgagcaacatttcacttgttttcatcactgtaacatttgctacaatggtacatttcaccctatatgaatcattgtttcctagttttttcatagttaagtactggttagcaaatttggaattctaattcattattttcaattattatgcagtgtaaatctgcagctccaattttcattcttctgtttgcctttttgtttaggtaagctatgctgttgatttcttttcaacagtgtatacacatgtgttttcttctaaagtgatttcttccattattcgttgatttaaataccaattatgcaaccttaaattgagcctcgatctgatttttccatccttaataactcttaagtgctttaatctttataatgaatgcacccacaagcacaaagcactcaaaagcacgcactgacacgtgcactctcacatgaacaatacgagtaagttggtagatttaaaatgtttgcttctatctatacttttatgtaatgtatcttttgttgatttttatttttctaaccttgagtgggtatcttgcttcaacctgctaatgttggttctgtttcttttatcgttctatttctctttcatgcaaatcgcttttttttttcttgtcgctttgtctaggaattatattcttatatacttctgttttttttataaatcgttttgatgttatagagctaaacttttcatctttctttggaaggctagagaagcccagctttaaccttcttggaatcatactgattgtttcctttggagttctactaacaggtactgaaatactgaattcatcaagaaataacagttctctttttatttgaaacaattctcttttgttctttttagagagcgctgacaaaatgaccttccaaattgtatatattgctttattaaagggattatggtgtaatttccaattttttcacttagatgttgcattgttactgcttgatgctaccacgtactggcatgcctattagtacttatcttatgctccatcattgtttaactatggtaaaaaaatttctttctggacagttgctaaagagacagaattcaatctttggggatttgtatttattatgcttgctgctgttatgtctggtttccgctggtgcatgacacagattctcctccaggtttaatactttgttctttaatagtttgtcttactactgttatgattcaaagttgatgattgggcatgtcactatgtcctcttaattatatacagctattttatattttaatttccattgatgtactgactgtactttcttttttgttattctcttatgtgtctatggaatctactgaagaaagaggaatatggtatgcattttgtcatagcctttttgtccattgagaggatttatcttaatcctatttgtttgtgttgcatctcatgcctgaaactgcccttattgcttcgactttaacagtaacatgaattataatccttattaaaaaaggttatatgaactagaaatattatgtagcattaggttcttaatatatacgcatgaagatacatttgtttttaaactaggaaccaccatgtaacagccatcctttttgttttctatgattcacaggattaagaaatccctttacgttgatgagttatgttaccccggttatggcaataacaactgcaattctttctattgcgatggatccatggcacgacgtcagggcaagccacttttttgataattcaactcacataataaggagcagcttattgatgcttcttggtggtgctttggcctttttcatggtatggatcatgtacccacttgtcagaattagcttgctaatgatgaatgtcgccgtgcaccaataatacctgcaatgagtcctttttttcttcagtcaggatacactaacagtttttattatacatgcctgctgattatttttgttgtgagttgtcatatcatgaaatgtatccgtaaaagatgatgacaaggacctttccacctgcaggttttgacagaatatgttctggtttctgtaacaagtgctgtaacagtgaccgtagctgggattgtgaaggaagcggtcactattttggtataactaaagcttgatttcactttaaatattcattatgtatataattcatctatgttcatgcatgtgagtttgagtcaacttgtaacaattaaaactgacaggttgctgtgcttttcttcaatgatacatttacctggttaaaggggcttgggctgggaataataatatttggtgtcagtctattcaacttatacaagtaagtcaatgttcccttttctatgttgaaattttgttttcatgttaactcgaaacctattcatatttctaatcactagattaacttcaagtcatcaactgtaccacaattctaataatgttggtgctttcttttcacttgaacctttattactacctatcgcattattcaacaatatttgtttggcacgtcagctctttgtgtgagagggtataaagcaataattagcaagcatttagcatctctgtttgctatgtaactagaagcaaaattttattttctaatgcatccgtgttgagtgaacaatatttcctcattcttctcccatgatatgcgaaggtatcataggttcaagaaaggccatcgtaataagaattgtgacaagaacccccaaacttctagcggtgcttcaaaatatgttatccttgatgatgacgatatggaaaaccagggtaattcaggctgatgtcatcaggtgagtaagaaaatatgatggataaaatgtttgttcagttttttatatttctcattgttggcaattggcttgacagtggcacatttttttttcccagagagtggactatttgatggattttcatattctggaaatttagttacctatgcctcctcacaggtgactaccatctatacatcttgccttggtatcaagtgccatcgttttttatcttttctgtgcttccacgacttagggaagttgtgttgttattcatgaggatgagcatgaacatgaacatgacgcaaacaatattattgattaagaagacacatttacacaagcagcagacaatctagtcgccaaagaaagattttcatgtcaacaaaaaaggtgcagatatctgtcaagaactgtgcataaatagtattgttatatttgataatacttttcctccacttaggaatttgctaatgctttctttaattggaagagtagagagctcagttttggccagtattggcacgtgcgcggaagaatagcatgagacacctttttcttcgataggaaaatacattgtttatatgtagcaatattgtaatttatgattttctttacttttagctaaatttactgcatagaaatgtgtaaatattacatgataatagaattcttttcccttattttgagattattatatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0749900, RefSeq:Os01g0749900