Os01g0750300

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Revision as of 05:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0750300| Description = Similar to Cellulose synthase (Fragment)| Version = NM_001050787.1 GI:115439944 GeneID:4324625| Length = 5725 bp| D...")
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Gene Name

Os01g0750300

Description

Similar to Cellulose synthase (Fragment)

Version

NM_001050787.1 GI:115439944 GeneID:4324625

Length

5725 bp

Definition

Oryza sativa Japonica Group Os01g0750300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33178792..33184516

Sequence Coding Region

33178923..33179088,33179189..33179298,33179396..33179468,33179576..33179723,33180455..33180721
,33180822..33181164,33181253..33181390,33181977..33182102,33182214..33182426
,33182506..33182752,33182835..33183034,33183126..33183479,33183572..33184156

Expression

GEO Profiles:Os01g0750300

Genome Context

<gbrowseImage1> name=NC_008394:33178792..33184516 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33178792..33184516 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggagtcgggggtcccgccctgcgccgcgtgcggggacgacgcgcacgccgcctgccgcgcctgcagctacgcgctctgcaaggcctgcctcgacgaggacgccgccgagggacgcaccacctgcgcgcgctgcggcggggagtacggcgcgcccgacccagcgcatggccagggggcggtcgtggaggaggaagtggaagagagccacgagccggcggccggcggtgttcgcgagagggtcaccatggccagccaactcagcgatcaccaggatgaaggagttcatgccaggactatgagcacccatgccaggacaattagcagtgtctctggagttgggagtgaattgaatgatgaatctgggaagcccatctggaagaacagggtggagagctggaaggagaaaaagaaagagaagaaagcctcagcaaagaaagctgcagcaaaagctcaagctccacctgttgaagaacagattatggatgaaaaagacttgacagatgcatatgagccactttctcggatcattcctatatcgaagaacaagctcacaccttacagggcagtaatcattatgcgtctggtagttctggggctcttctttcactaccgtatcaccaaccctgtttacagcgcctttggtctctggatgacatcagtcatatgtgagatctggtttggattctcctggatcctggatcagttccccaagtggtgtcctatcaatcgcgaaacttatgttgataggctgattgcacgatatggagatggagaagattctgggttggcacctgtagatttctttgtcagtacagtggatccattgaaagagcctcctctaatcactgcgaatactgttctgtccattcttgccgtggactatccagttgagaagatttcgtgttacgtgtcagacgatggttcggctatgctcacatttgaatcacttgcggaaacagcagaatttgctaggagatgggttccattttgcaagaagtactccattgagccacgtgcccctgagttctacttctcacagaagattgactacttgaaggacaagatacacccatctttcgtcaaggagcgtcgggctatgaagagggattacgaagaatacaaggtgaggataaatgctttggttgctaaggctcagaagacacctgaggaaggctggattatgcaagatgggacaccatggcctgggaacaaccctcgtgaccaccctggaatgatccaggttttccttggtgagaccggtgctcgggactttgacggaaatgagcttcctcggctagtctatgtttcgagagagaaaagaccagggtaccaacaccacaagaaagcaggggccatgaacgctttggttcgagtatccgcagttctgacaaatgccccttacattcttaatcttgactgtgatcactatgttaacaatagcaaagctgttcgtgaagcgatgtgtttcatgatggacccttctgttggtagagatgtctgctatgtccaattcccacaaaggttcgatggcattgatcgcagcgatcgttatgccaataggaatgttgtgttctttgacgttaacatgaaagggcttgatggcctccaaggtccggtttatgtgggaactggttgttgtttctataggcaagcgctctatggttatggaccaccatcactgcctgcgcttccaaagtcttctgtctgttcatggtgctgctgctgctgtcctaagaaaaaagctgaaaaaagtgagaaagaaatgcatagagactctcgacgtgaagaccttgagtccgccattttcaatcttcgggaaattgacaactatgatgagtatgaacgctcgatgcttatctcccagatgagctttgagaagtcgtttggactgtcatcagtgttcatagaatcaactcttatggagaatggaggcgttcctgagtccgcaaacccatctacactgatcaaagaggccattcatgtcattagctgtggatatgaagagaaaactgaatggggaaaagagattggctggatctacggttcagtcacagaggatatcctgactgggtttaagatgcactgccgtggctggcgatccatctactgcatgccgataagacccgcgttcaagggatcagcgccaatcaacctttctgatcgtctccaccaggttctccggtgggctctcggttccgttgagatcttcctcagccggcactgcccactctggtacggctacggtggtggtcgtctgaaatggctccagagattgtcctacatcaacaccatcgtctacccgttcacctctcttcctcttattgcatactgttgcctgcccgccatttgcctgctcacaggcaaattcatcattcccacgctctccaacgctgcaaccatatggtttcttggcctcttcatctccatcatcgtgacgagcgtcctggagctgcggtggagtggcatcggcatcgaggactggtggcgcaacgagcagttctgggtcatcggtggcgtctccgcccacctcttcgccgtgttccagggtatcctcaagatgattgctgggctggacaccaacttcaccgttacggccaaggcgacggacgacaccgagttcggcgagctgtacgtgttcaagtggacgacggtgctgatcccgccgacctccatcctggtgctcaacctcgtcggcgtggtggccgggttctccgacgcgctcaacagcggctacgagtcctggggcccgctcttcggcaaggtgttcttcgccatgtgggtgatcatgcacttgtaccccttcctcaagggtctcatgggtcgccagaaccggacgcccaccatcgtcgtgctctggtctgtcctgctcgcctccgtcttctccctcctctgggtcaagatcgacccgttcatcggcagctccgagaccaccaccaccaacagctgcgccaacttcgactgctga</cdnaseq>

Protein Sequence

<aaseq>MMESGVPPCAACGDDAHAACRACSYALCKACLDEDAAEGRTTCA RCGGEYGAPDPAHGQGAVVEEEVEESHEPAAGGVRERVTMASQLSDHQDEGVHARTMS THARTISSVSGVGSELNDESGKPIWKNRVESWKEKKKEKKASAKKAAAKAQAPPVEEQ IMDEKDLTDAYEPLSRIIPISKNKLTPYRAVIIMRLVVLGLFFHYRITNPVYSAFGLW MTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDP LKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKK YSIEPRAPEFYFSQKIDYLKDKIHPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEE GWIMQDGTPWPGNNPRDHPGMIQVFLGETGARDFDGNELPRLVYVSREKRPGYQHHKK AGAMNALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFMMDPSVGRDVCYVQFPQ RFDGIDRSDRYANRNVVFFDVNMKGLDGLQGPVYVGTGCCFYRQALYGYGPPSLPALP KSSVCSWCCCCCPKKKAEKSEKEMHRDSRREDLESAIFNLREIDNYDEYERSMLISQM SFEKSFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIY GSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLS RHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSN AATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMI AGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYE SWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPF IGSSETTTTNSCANFDC</aaseq>

Gene Sequence

<dnaseqindica>132..297#398..507#605..677#785..932#1664..1930#2031..2373#2462..2599#3186..3311#3423..3635#3715..3961#4044..4243#4335..4688#4781..5365#agcctctctctctctccccctcccattctgcgcattgctctctgcgcgcggtcgcgtgctgctgctcgcggcgccccggagcgtctcctttgggggagaggagaggagaggagaggagaggggggtgagccatgatggagtcgggggtcccgccctgcgccgcgtgcggggacgacgcgcacgccgcctgccgcgcctgcagctacgcgctctgcaaggcctgcctcgacgaggacgccgccgagggacgcaccacctgcgcgcgctgcggcggggagtacggcgcgcccgacccaggtgcccccgcgcgctgcgggttactgttttgccctatgcgggattcgatcgatgcgggggatgaagtagcagtttctgacgaggttgatctctgtcacagcgcatggccagggggcggtcgtggaggaggaagtggaagagagccacgagccggcggccggcggtgttcgcgagagggtcaccatggccagccaactcagcgatcaccaggtgaatagccctctccataaactcgtgcaattctgggtagaacagcttgagcgctccgacgttgttgacaatgttgtgtgggattttgtgggaacaggatgaaggagttcatgccaggactatgagcacccatgccaggacaattagcagtgtctctggagttgggagtggtaagcaactcgtctcgttgtctgtcatatttttccttgcattattccaactgagtactgatatatatatatatatatatatattttcacttgttatggatttgaagaattgaatgatgaatctgggaagcccatctggaagaacagggtggagagctggaaggagaaaaagaaagagaagaaagcctcagcaaagaaagctgcagcaaaagctcaagctccacctgttgaagaacagattatggatgaaaaagagtaaggaacatggaaccatttcatagatccatgtgatccatcaaaaacttaacatttcttgattcatatacattatttacagttacaaatgaaaattcttgtgtatattaaaatatatctgattagatcaataggctaagaatactcttgatccttgttgacatataaaaaaacaaactttatggtttgggtaaatttagaatctggctatatctaaccttttctttgaatgtactagatgccagatcatgtgcatttagaactgaacttgttgtcttatgcagacgttattcgtttagaactgaactaataaatccctaatgcagatattatctcacaatgctaaaatataaaacgtctaattggattactacagaaaaaccctttagctaatttcgagatcagcatatgtagtcaatcttaagttcttaacacatcatatttcatacttcattaataaggtttcattttggtgcagcttatctttttctggtataacactaggccttcttattttgtgatgcgaacagtacatgttcatctttgttcctccagtatactatcctagcctattatgcaacctttttaacttcgtgttcatatcctgataatgtgccagtaaagtctcagtttcagaaactcttgttacttcaggttttaaatgctgattgttgacataacactgtacttggagaattgattgtaataccaagcaatttgcccttttgcagcttgacagatgcatatgagccactttctcggatcattcctatatcgaagaacaagctcacaccttacagggcagtaatcattatgcgtctggtagttctggggctcttctttcactaccgtatcaccaaccctgtttacagcgcctttggtctctggatgacatcagtcatatgtgagatctggtttggattctcctggatcctggatcagttccccaagtggtgtcctatcaatcgcgaaacttatgttgataggctgattgcacggtgtgttcgctaaagcctaatttgtatatgaaaactatatacattactattcattaagaatttgtgtctcataagctgcattgctcatgtgttgtttcagatatggagatggagaagattctgggttggcacctgtagatttctttgtcagtacagtggatccattgaaagagcctcctctaatcactgcgaatactgttctgtccattcttgccgtggactatccagttgagaagatttcgtgttacgtgtcagacgatggttcggctatgctcacatttgaatcacttgcggaaacagcagaatttgctaggagatgggttccattttgcaagaagtactccattgagccacgtgcccctgagttctacttctcacagaagattgactacttgaaggacaagatacacccatctttcgtcaaggagcgtcgggctatgaaggtagataggagtttatacagtttgatggtgctctttatgttatattgtacttttgctaatattaaagcaactatcacattttgtgcagagggattacgaagaatacaaggtgaggataaatgctttggttgctaaggctcagaagacacctgaggaaggctggattatgcaagatgggacaccatggcctgggaacaaccctcgtgaccaccctggaatgatccaggtaattcagttttcattaccaaaacatcaatcttggatatttgttcttgtattcataccgggcaaccttttacagatttgcaagtttgtaattctcacctgaaaacgggatagtttctggtgtacaaaagttaagaataaatgaagtttaggttgccacttggagtagagattctattgacttctgctttgaaacaaaatatgtcaagtgttaactattgtttgcatgcagaaaaccaggagagaaagtctaatcctatgcagttccactttaagattttcgcagataatatatgtcatacaacttcaattgattatcgatatgctcattcttgttgtccaggagattgtgcataaattctatcctactcttcaggatgcagttaattaaaattatgtcattagagtaactcaaggttttacagatttattagtaaaatggttcaaatgttttgtggagccccctctctctcacacactcacatatggctttttatacttgcatcaaaaccaagacatagataacatgcagacgatagcctattcttcaaacttacacttagcataccactggctttttgtaacaggttttccttggtgagaccggtgctcgggactttgacggaaatgagcttcctcggctagtctatgtttcgagagagaaaagaccagggtaccaacaccacaagaaagcaggggccatgaacgctttggtaaaaatagctcctagagaaaattacacatatatgtattagtttaaagtatggcaaacttatcatgtggatatagtaattgaaagtttggtcacctttctaatttttcaggttcgagtatccgcagttctgacaaatgccccttacattcttaatcttgactgtgatcactatgttaacaatagcaaagctgttcgtgaagcgatgtgtttcatgatggacccttctgttggtagagatgtctgctatgtccaattcccacaaaggttcgatggcattgatcgcagcgatcgttatgccaataggaatgttgtgttctttgacgtaagtactaagagagtgactatgtattgcatgactattatctttacccaatttatatattcatacttatcatctgcaggttaacatgaaagggcttgatggcctccaaggtccggtttatgtgggaactggttgttgtttctataggcaagcgctctatggttatggaccaccatcactgcctgcgcttccaaagtcttctgtctgttcatggtgctgctgctgctgtcctaagaaaaaagctgaaaaaagtgagaaagaaatgcatagagactctcgacgtgaagaccttgagtccgccattttcaatcttcgggaaattgacagtaagtgcacaaacatggagagataaaagtagttcgaaatttgaataattttgtgttcattataatgtggtttgttttgcagactatgatgagtatgaacgctcgatgcttatctcccagatgagctttgagaagtcgtttggactgtcatcagtgttcatagaatcaactcttatggagaatggaggcgttcctgagtccgcaaacccatctacactgatcaaagaggccattcatgtcattagctgtggatatgaagagaaaactgaatggggaaaagaggtgttaattctccccttattatctatacctttgttgaagttcattcctcctaaaactcaaagcgtgatttcttggttctgtcctgtcatagattggctggatctacggttcagtcacagaggatatcctgactgggtttaagatgcactgccgtggctggcgatccatctactgcatgccgataagacccgcgttcaagggatcagcgccaatcaacctttctgatcgtctccaccaggttctccggtgggctctcggttccgttgagatcttcctcagccggcactgcccactctggtacggctacggtggtggtcgtctgaaatggctccagagattgtcctacatcaacaccatcgtctacccgttcacctctcttcctcttattgcatactgttgcctgcccgccatttgcctgctcacaggcaaattcatcattcccacggtaagatgcctgtctctatacatgtttttggtttgagttctgatgttgaacattgcttagtgacattattcatttgtcgttcttaatttcagctctccaacgctgcaaccatatggtttcttggcctcttcatctccatcatcgtgacgagcgtcctggagctgcggtggagtggcatcggcatcgaggactggtggcgcaacgagcagttctgggtcatcggtggcgtctccgcccacctcttcgccgtgttccagggtatcctcaagatgattgctgggctggacaccaacttcaccgttacggccaaggcgacggacgacaccgagttcggcgagctgtacgtgttcaagtggacgacggtgctgatcccgccgacctccatcctggtgctcaacctcgtcggcgtggtggccgggttctccgacgcgctcaacagcggctacgagtcctggggcccgctcttcggcaaggtgttcttcgccatgtgggtgatcatgcacttgtaccccttcctcaagggtctcatgggtcgccagaaccggacgcccaccatcgtcgtgctctggtctgtcctgctcgcctccgtcttctccctcctctgggtcaagatcgacccgttcatcggcagctccgagaccaccaccaccaacagctgcgccaacttcgactgctgagcgacatttgtgctccaggagcatcccgtttggcggtgttttgccggtattgcaaatgtgtgtatctaatgcgacgaagacgatgggtggtttcctctctctgggctttgtcctcgatctgagaggtgttgtaggttagtactccgcatgaaaatgttcattgtattgttattgtctgtgatataagaagttttgatgttgaagccgctgaaactatgagagggcaccgttaaatccgtttaatcatacttgtagaaaaaagagggggaaagaaaaggttttcttcggtgaacttgaaattggactactgatcagtttgtaatgttatatgactatatgctactgaatcttatcttatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0750300, RefSeq:Os01g0750300