Os01g0750600

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Revision as of 05:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0750600| Description = Pistil-specific extensin-like protein family protein| Version = NM_001050790.1 GI:115439950 GeneID:4324628| Length =...")
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Gene Name

Os01g0750600

Description

Pistil-specific extensin-like protein family protein

Version

NM_001050790.1 GI:115439950 GeneID:4324628

Length

3463 bp

Definition

Oryza sativa Japonica Group Os01g0750600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33229845..33233307

Sequence Coding Region

33230118..33230480,33230605..33230766,33230856..33231003,33231124..33231200,33231281..33231351
,33231553..33231639,33231726..33232190,33232584..33233259

Expression

GEO Profiles:Os01g0750600

Genome Context

<gbrowseImage1> name=NC_008394:33229845..33233307 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33229845..33233307 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcatctcaggcgccgtcggcgccggtcacgccggcggctccaccgccgcagacgccacccgtgacgcctcctccggtgactgctcccccgccggtctcaccccctccggtgacgccaccaccggtgactcccccgccggtgtcacctcctccggtgagtcccccacctgtgacacctcccccggtgagccccccacctgttacacctcccccggtgactcctcctacaccggtggctcctccaccagtgccaccgtcaccgcctccaccgacgccgaccccaacgccggtgacgccgtccccacctccgccggtgacgccatcccctcctccgcctgtcgcaagcccgccgccgcccgatgtcccaaccgccccgccaccgagtaacaaccccccgtctccgccaccgtcccccagcaacgtcccagcctcaccaccgccaccgcgaatttctttatccccaccgccaccgccctcgacgccgacgcagtcgggtgcctcctccggctccaagtcctccaacaacgggaccgtggtggccgtcggcgtggccgtcgcggcggtggtcgtgctcggcctcgccgccggtctgatctacttcttcgttagcaagaggcgccggcgccgccaacacccgccgccgccgcaccacccgggctacccacccttcccagccgaattctacgacccgcaccggccgccgtcgcagcagcagtcacacgcgctgtcgccgagcccctcgtcgacgccgccgctgctgctgcagccgcactcgttcgtgagcagcggcggggcgtccgaggcggcgtcggcggtgccggggatcgcgatgatgggcggcgcgttcgggtacgacgagctggcggcggcagcggacgggttctcggaatcgaacctgctcgggcagggcgggttcgggcaggtgtacaaggggacggtgcgcgggcaagaggtggccatcaagaagctgcggtccggcagcgggcagggcgagcgcgagttccaggccgaggtggagatcatcagccgcgtgcaccacaagaacctcgtctccctcgtcggctactgcatctacggcgagcagcgccttctcgtctacgagtacgtccccaacaagacgctcgagttccacctgcacggtagcggccggccggcgctggactggccgcggcggtggaagatcgcggtcggctcggccaagggcctcgcgtatctgcacgaggactgtcatcctaagattattcatagagacatcaaggcagccaacatcctgctggactacaccttcgaaccaaaggttgcagattttgggttggccaagtaccaagccactgagcagaccgctgtttcgacgcgcgtaatgggaacttttggatatttagctccagagtatgctgccacgggcaaagtgaacgaccgttccgacgtcttctcattcggcgtgatgctcctggagctgatcaccgggaagaagcctatcatggtgtctcacggtgaccagcctgacacattggtttcttgggcgagacccctgctggtgagagctgtggaggaggagaacttcgaggagctggttgacccgaggctggagaacaactacgacgcgtacgacatggggcggctgatcgcctgcgcggccgccgccgtgcgccacaccgcgcggtctcgcccgcggatgagccagatcgtgcgttacctggagggcgagctggcggcggaggacctgaacgctggcgtgacgcccgggcagagcgcgatgcagcggacgagcggcggcacgacggaccagatgaagcggctcaggaagatggcgttcggctcggccaccggtacgggcaccgtcagcgagtacacgagcagcgagttcagcgagccaactagcgagtacgggctgaacccgtccaccgagtacaccaccagcgcagccggcggcgacaccggggaggtgacggtggacgtgcagatgacggccggcgccagcggcgaggcggccggcacggagaggctgagcaggcggaccaccgctagacgtggcgggcgggtgtga</cdnaseq>

Protein Sequence

<aaseq>MSSQAPSAPVTPAAPPPQTPPVTPPPVTAPPPVSPPPVTPPPVT PPPVSPPPVSPPPVTPPPVSPPPVTPPPVTPPTPVAPPPVPPSPPPPTPTPTPVTPSP PPPVTPSPPPPVASPPPPDVPTAPPPSNNPPSPPPSPSNVPASPPPPRISLSPPPPPS TPTQSGASSGSKSSNNGTVVAVGVAVAAVVVLGLAAGLIYFFVSKRRRRRQHPPPPHH PGYPPFPAEFYDPHRPPSQQQSHALSPSPSSTPPLLLQPHSFVSSGGASEAASAVPGI AMMGGAFGYDELAAAADGFSESNLLGQGGFGQVYKGTVRGQEVAIKKLRSGSGQGERE FQAEVEIISRVHHKNLVSLVGYCIYGEQRLLVYEYVPNKTLEFHLHGSGRPALDWPRR WKIAVGSAKGLAYLHEDCHPKIIHRDIKAANILLDYTFEPKVADFGLAKYQATEQTAV STRVMGTFGYLAPEYAATGKVNDRSDVFSFGVMLLELITGKKPIMVSHGDQPDTLVSW ARPLLVRAVEEENFEELVDPRLENNYDAYDMGRLIACAAAAVRHTARSRPRMSQIVRY LEGELAAEDLNAGVTPGQSAMQRTSGGTTDQMKRLRKMAFGSATGTGTVSEYTSSEFS EPTSEYGLNPSTEYTTSAAGGDTGEVTVDVQMTAGASGEAAGTERLSRRTTARRGGRV </aaseq>

Gene Sequence

<dnaseqindica>2828..3190#2542..2703#2305..2452#2108..2184#1957..2027#1669..1755#1118..1582#49..724#gttgaatcataccgagagcctaacgttgcacctgcgccgcgtgccaccatgtcatctcaggcgccgtcggcgccggtcacgccggcggctccaccgccgcagacgccacccgtgacgcctcctccggtgactgctcccccgccggtctcaccccctccggtgacgccaccaccggtgactcccccgccggtgtcacctcctccggtgagtcccccacctgtgacacctcccccggtgagccccccacctgttacacctcccccggtgactcctcctacaccggtggctcctccaccagtgccaccgtcaccgcctccaccgacgccgaccccaacgccggtgacgccgtccccacctccgccggtgacgccatcccctcctccgcctgtcgcaagcccgccgccgcccgatgtcccaaccgccccgccaccgagtaacaaccccccgtctccgccaccgtcccccagcaacgtcccagcctcaccaccgccaccgcgaatttctttatccccaccgccaccgccctcgacgccgacgcagtcgggtgcctcctccggctccaagtcctccaacaacgggaccgtggtggccgtcggcgtggccgtcgcggcggtggtcgtgctcggcctcgccgccggtctgatctacttcttcgttagcaagaggcgccggcgccgccaacacccgccgccgccgcaccacccgggctacccacccttcccaggtacgtaagcgcgtattcccctcctttcattggcagtgttggtcgcgcgagatcatgctacgtcgcggccacgtcgacgcgacaatgcgcgacgcggggtcccccaagcctttttcggtgttagcgcgatcccatccacgcccttcgctgcggtcgtcgcgggtgaccgatggtggtgatagcgacacatcggcatcgcgtacagtgcgacgtattccatctcgtccggctcgtgtccgcggtcttcgcggcgcacactcgttagcgtttgaccattttgtatgctatgctcgtgaaaattttctccagggatgcatcgatctgtgcgcggcgattgagttgagctgatcgaatgttttttttttccctgttttgttgccgtgccacctgcagccgaattctacgacccgcaccggccgccgtcgcagcagcagtcacacgcgctgtcgccgagcccctcgtcgacgccgccgctgctgctgcagccgcactcgttcgtgagcagcggcggggcgtccgaggcggcgtcggcggtgccggggatcgcgatgatgggcggcgcgttcgggtacgacgagctggcggcggcagcggacgggttctcggaatcgaacctgctcgggcagggcgggttcgggcaggtgtacaaggggacggtgcgcgggcaagaggtggccatcaagaagctgcggtccggcagcgggcagggcgagcgcgagttccaggccgaggtggagatcatcagccgcgtgcaccacaagaacctcgtctccctcgtcggctactgcatctacggcgagcagcgccttctcgtctacgagtacgtccccaacaagacgctcgagttccacctgcacggtaagtacttgctgccggatgatgtaccattgttgcgtgtaatgctggggcttgcttgggctgacacgagtggttggtttctgcaggtagcggccggccggcgctggactggccgcggcggtggaagatcgcggtcggctcggccaagggcctcgcgtatctgcacgaggactgtgagttccaccttgtgtttcctccgaaatctaaggtggtgtttgggaatctctaacaaaaatataagtccctatgagagagacttgtgcttttgttaaaaggattaaagtttagtcctttcttcctaaacaccacataaatatatgcggaatctgtgaaactgtggttctgataagatggcatgctttgactgttgtcaggtcatcctaagattattcatagagacatcaaggcagccaacatcctgctggactacaccttcgaaccaaaggtaaatcgcgaaaatttggaacctgcaataattgacgttatacgcgtatttatcgcgaaggtgcacacatgtttgtacaggttgcagattttgggttggccaagtaccaagccactgagcagaccgctgtttcgacgcgcgtaatgggaacttttgggtaaacacatcaccatcacaaccacaacaatcaattacacttgcactcgtacgtcaaaagttcctcagtgcacgcaccacgcggactaaactttgtgctgtcaacaacttgtatctccagatatttagctccagagtatgctgccacgggcaaagtgaacgaccgttccgacgtcttctcattcggcgtgatgctcctggagctgatcaccgggaagaagcctatcatggtgtctcacggtgaccagcctgacacattggtttcttgggtgagtgggcttccgagtcttgaaccgaacacgtagatttccatttgccacggccggtgaaagtagtcatctctgtgtgtgtccaacaggcgagacccctgctggtgagagctgtggaggaggagaacttcgaggagctggttgacccgaggctggagaacaactacgacgcgtacgacatggggcggctgatcgcctgcgcggccgccgccgtgcgccacaccgcgcggtctcgcccgcggatgagccaggttcttgccaaaactcctcacaccttcactgaacaaacacaaacacacagcacacaccgcacggcttctggtttcagcaactccgtagcttgtacactgaaaatgtggacactcgaatggtcagatcgtgcgttacctggagggcgagctggcggcggaggacctgaacgctggcgtgacgcccgggcagagcgcgatgcagcggacgagcggcggcacgacggaccagatgaagcggctcaggaagatggcgttcggctcggccaccggtacgggcaccgtcagcgagtacacgagcagcgagttcagcgagccaactagcgagtacgggctgaacccgtccaccgagtacaccaccagcgcagccggcggcgacaccggggaggtgacggtggacgtgcagatgacggccggcgccagcggcgaggcggccggcacggagaggctgagcaggcggaccaccgctagacgtggcgggcgggtgtgacagtgcgacaccggaatttcggtgccccgcccggcgagcccggcgacttttagccgtacgtgatcgtcaaggttgcgatcgaatgaattaaatcattttgttcgtgtatatatacacgtaatgctgtcactgtaaattaaactacattccaaatcccgcggttgtttctttggttttcgaattcatgcaatttttgttggagtggaagtttgtaaattgtacctaccttcactaaccacccaggttaataaacatcaaagatgagatttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0750600, RefSeq:Os01g0750600