Os01g0753500

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0753500| Description = Transcriptional factor B3 family protein| Version = NM_001050809.1 GI:115439988 GeneID:4327014| Length = 6016 bp| D...")
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Gene Name

Os01g0753500

Description

Transcriptional factor B3 family protein

Version

NM_001050809.1 GI:115439988 GeneID:4327014

Length

6016 bp

Definition

Oryza sativa Japonica Group Os01g0753500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33373036..33379051

Sequence Coding Region

33373593..33374431,33374518..33374680,33376051..33376126,33376203..33376319,33376440..33376604
,33376688..33376778,33377412..33377496,33377601..33377783,33378193..33378249
,33378336..33378755

Expression

GEO Profiles:Os01g0753500

Genome Context

<gbrowseImage1> name=NC_008394:33373036..33379051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33373036..33379051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtccgcatcctcctcctcctccccatcctcgcggccgccgctgatggctctcccctctttttaccggcccccttggccgtccgagaggggcggcgagcagcgagccaccgactgttgggccggatccccagcggcgggaggcggccgggcgcgtgccaccgccatgggcatcgacctcaacaacaccgcgagcggcggcgaggaggacgcgccggcgccggggccggtgtgccgggatctgtggcacgcgtgcgctgggccggtggtgtcgctgccgcggcggggcagcgcggtcgtgtacctgccgcaggggcacctctccgcggccggcgccggcggcgggatccgcggggaggtggcggttgccctccctccccacgtggcgtgccgcgtcgtggacgtcgagctatgcgcggatgcagcgacggacgaggtgtacgcgcgactggcgctgcgggcggagggcgaggtatttgagaggaacttgcatggtggtggaatcgaaagggaggatgacatggaggatggtgatgaggaaaggaagtccaggatgctgcacatgttctgcaaaacactaacggcctctgatacaagcacacatggagggttctctgttcctcgtcgggctgctgaggattgctttccacctctggaccacaaacagctaaggccttctcaagagcttgttgccaaggatttgcatggagcaaagtggaggttccgccatatttatagaggtcaacctcgcaggcatcttttaacaactggatggagctcctttgtcaataaaaagaaactggtctcaggggacgcggtgttatttctccggggtgatgatggtgagctaagattgggtgttcgaagagctactcagcttaaaaatgaagcgattttcaaagcttttagtagcgaaagttcaaagatgcgcacactgtcggctgtggctgattccttgaaacatggaagtgtttttcacatttgttacaacccaagggctactgcttctgagtacgttgttccatattggaagttcgtgaaaagcttcaaccatccagtttgtattggaatgaggttcaagtttcattttgagagtgaagatgttaatgagaggcgttctggaatgattgccggtgttagtgaagtagaccccatcagatggcctggttcaaagtggagaagccttctggttcgatgggaggatgctactgactgcaacagccaaaatagagtatctccatgggagattgagatagttggtggttcaatctctgttgctcattctctgtcggcatccagttctaaaagaaccaaattatgccctcagggcaatttggacgtgccagctctgtatggaaatggtcgtccagactcggtggaaactgaaaagttccccagggtcttgcaaggtcaagaattgatgggttctaggacccatcgtgctacttgttctcctcagtcaatcgacattacaaaaagtaagtcttttgatgcttggagattccttactgatacacgaagctgcatgttgggcagttcaacaagcagacttccagtgcagtactctggctatacccaccaatctgtaagcttcggtgaatctattggattcccagaggtcttgcaaggtcaagaaatttctcagacagttcctccgtttcaaggaatgttgcctgatgcatgttcagcgaaaagcagatatgaattaaagaattatgtgtgcaccccagctaccatgaatggactatcatctgcaaatgaaggatattgtctctccctgtcaactgtgccaccttctccaccttccagtcttatgttataccaaacaggggtaccacagcttgaattggcaagcaagaacaatgacaaaagtggaaatgacagccaaccagccttgcgacagcacaagttgctcagtgaaactagctgggaccagtttaaaattggaaaggcttcaacacctgggaatgctactaagcctggtaatggtggaagggaggttgacagaactagttgccgcctttttggtttttccttgaccgagaagattatcccaacagacaaagatggtgaaaaggaagtgagttatgaaactgattgccaaaatccacggatgctagacttgtttgggtacaattgcagtacgcctggtgctcttcatgccctttgtgctgctcctttgggaatatga</cdnaseq>

Protein Sequence

<aaseq>MASSASSSSSPSSRPPLMALPSFYRPPWPSERGGEQRATDCWAG SPAAGGGRARATAMGIDLNNTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVV YLPQGHLSAAGAGGGIRGEVAVALPPHVACRVVDVELCADAATDEVYARLALRAEGEV FERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFP PLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVL FLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPR ATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERRSGMIAGVSEVDPIRWPGS KWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVP ALYGNGRPDSVETEKFPRVLQGQELMGSRTHRATCSPQSIDITKSKSFDAWRFLTDTR SCMLGSSTSRLPVQYSGYTHQSVSFGESIGFPEVLQGQEISQTVPPFQGMLPDACSAK SRYELKNYVCTPATMNGLSSANEGYCLSLSTVPPSPPSSLMLYQTGVPQLELASKNND KSGNDSQPALRQHKLLSETSWDQFKIGKASTPGNATKPGNGGREVDRTSCRLFGFSLT EKIIPTDKDGEKEVSYETDCQNPRMLDLFGYNCSTPGALHALCAAPLGI</aaseq>

Gene Sequence

<dnaseqindica>4621..5459#4372..4534#2926..3001#2733..2849#2448..2612#2274..2364#1556..1640#1269..1451#803..859#297..716#ctcgctgactcgctccagccagcagcagcagcagcagccactgctcgcgacggaacagacgacaccaccacgacgcccgcgtcataaaggcatgggcattgtcgcaggctagccacagcgacggggtagcagcagcatcagcagcagcagcggcaacagcgaccggcattgatagcggcagctgaggaaggaagagggcgcgcggtcgccgcaggagcggagcagggggggcatgggctgggcgggctgagcgctgagcaggagatggctggagagcgacgccctcggaggcattaatggcgtcgtccgcatcctcctcctcctccccatcctcgcggccgccgctgatggctctcccctctttttaccggcccccttggccgtccgagaggggcggcgagcagcgagccaccgactgttgggccggatccccagcggcgggaggcggccgggcgcgtgccaccgccatgggcatcgacctcaacaacaccgcgagcggcggcgaggaggacgcgccggcgccggggccggtgtgccgggatctgtggcacgcgtgcgctgggccggtggtgtcgctgccgcggcggggcagcgcggtcgtgtacctgccgcaggggcacctctccgcggccggcgccggcggcgggatccgcggggaggtggcggttgccctccctccccacgtggcgtgccgcgtcgtggacgtcgagctatgcgtgagtgaaccgctgtcgctcgtggtagggttttcgctgtgaggccgcgcgtggtgggctgcatttacatgctggactttgtgcaggcggatgcagcgacggacgaggtgtacgcgcgactggcgctgcgggcggagggcgaggtgcaacgctgcttcaattatcttattgattcatgtgcttccgggattggggattggatgagattcttgggggcgtcaaatgttggttgcctgcatcctcttttcagctttgggcgtggcataagctgcaatgtgatgggtgttgaatgagctttgatttttattggatgtctaaaaatagacattgttggttcattctaattttagtgagccacataatttgggacttactagatctacttggccagcttgatatagtatgagtgccgttttctctgcacaatgtagcttcatttagcacatctatcatgcctctaatttgtatattgtaccgatacgatgaattgttttggcataacaaattctattaacagatttgatttatcaatggtacatttggttggttcaggtatttgagaggaacttgcatggtggtggaatcgaaagggaggatgacatggaggatggtgatgaggaaaggaagtccaggatgctgcacatgttctgcaaaacactaacggcctctgatacaagcacacatggagggttctctgttcctcgtcgggctgctgaggattgctttccacctctggtgatgagattagaagtttgatttgtttcctattgactcttcaagtgactgcttgtcttgtgatgtaactctaacgaagtttgttttctttcgtgccttaataggaccacaaacagctaaggccttctcaagagcttgttgccaaggatttgcatggagcaaagtggaggttccgccatatttatagaggtgacatccgagtacttgataagggatatgcaatgcccttgttacacaatctatttatttaattgctagtaaatgtttgatttgatacctttgtatcggaaacttgtacgtcatactcatgtttgatgatcgggcatatacagagcattgctaaattatgtgtgactgttttagctttgaaagaggtcaggaagtattttagtcaatgctacaaaatatatggcaggtgtagcttttcaactctttgaatgtttgacattctaagtggtcagtagttttgcctgtctgaactgcgcgttcagtcgtctttgccattccctaggatgcaaattatttccttcctagttcatcttctgatacaatttatgttattcttttgtgacttccatcactttgttatatatggtgtgttatctctgcagtgaaaattacttctgttaataaaactgtacaattttgctcagatagtagtgtccttgaaacagtggatagaggatgctctccaatcttattgttgtccaagccaatatctccattttgattacaagggaaatgcacaagttatcttgtagttatagcatgtgatggagcaaagtatgacattatgaatttttaacattcttttcattccaggtcaacctcgcaggcatcttttaacaactggatggagctcctttgtcaataaaaagaaactggtctcaggggacgcggtgttatttctccggtaatcacttgatccaggtgttaaccataaagctaatgctttcttgtctatattttctaacgaagcattttaagcgtttgcaggggtgatgatggtgagctaagattgggtgttcgaagagctactcagcttaaaaatgaagcgattttcaaagcttttagtagcgaaagttcaaagatgcgcacactgtcggctgtggctgattccttgaaacatggaagtgtttttcacatttgttacaacccaaggtctgctgaataaaacatatagtgtttcattttgtgtggtccaactcaatacaatgtcattttctctggggcagttggactatatatccattcacatattgtaatcattggactttgtagggctactgcttctgagtacgttgttccatattggaagttcgtgaaaagcttcaaccatccagtttgtattggaatgaggttcaagtttcattttgagagtgaagatgttaatgagaggtttgcatttttcagttgaactatctttttttgtttttgcataatactttcttgggtcttactatctgtgttgtaggcgttctggaatgattgccggtgttagtgaagtagaccccatcagatggcctggttcaaagtggagaagccttctggtatgcatttgagctgcttttttattaagcttgttgactacggaacattaacttttggctacctgccaagtctttgaaacatatattagggcaccacatatagtcaatttcagttactgttttgtctatcggattaaatgtgaggttatttcacacattaaaataaattcatcaagttagctgaagtgctgaactcttgaatatgggtgcaacatccttcttgtcaaactcaaattttgaatccaagcctgatcttgtggagtagagaaattacttaggatgttctatgatcttttgtttgtgagtaaatatgtgcaaacattaataaatgctcaagtgagaactgagaagttgtcgaaataaattcaatacgtaataaaaatggtgtgctataaaaatgattagatgatttgtatcactttgattcctacattttgcagtctcttgcttagcccacattagtggttgggacaaatcatattagtcaattgggatgatatatcaagaataaaatgccaacccatctaaagggaatcagaacaaatggtcttgtaagtccttgaggcaccttaagacaaatggtcctcgcatgcatttctttttcacacttctgatcccaagattcccatgtaggtttaccattagcagatgtcagatagagaattgtttctgctggagtaaaatttcttaagtatctaggcttttgtagtttgagaactttgtagttcctgcatttctattaatagaaatggggagtttggccccttgataaaaaataagatagagaattgtttcacgcatatttggattgaaaaggacaataatgatgtaggatgtgtacaatctgtttatccgttttgctgtttataacatctggttggcagctaaaaaaaactctcttgatgaggaatttcgttggtcttctgccagttgccaatgtttgtcgccctatgccgcccaatgaagctcattgagcacacaggagaaacaaaacagtgaagagaatactagaggcatgttattattgcttgctaatatgggctggaacttgtttgctttcataatgtaagctgtaaggatcatcaaagttgtgcaaaaccaattatttagaggatttactaactgtaaccatatacattttaatgctatcaacaccttttatgatggcatccatgtctgtttaggtggggctaaatattttttattggattggaccaagaccacattatcaaggccccataggaagcctaacagcttagaatttttatagattttgatttgtccattataaatcgtttatggtgaatctattgtcaatattacccaaattcgctaatgttagcaatttgatttgctgtcttttcatacaggttcgatgggaggatgctactgactgcaacagccaaaatagagtatctccatgggagattgagatagttggtggttcaatctctgttgctcattctctgtcggcatccagttctaaaagaaccaaattatgccctcagggcaatttggacgtgccagctctgtgtgagttccaagagcacgaggtcaatacttggatctataaattctttaaccctatatgcttattggtttttgtgttaatcctgtagatggaaatggtcgtccagactcggtggaaactgaaaagttccccagggtcttgcaaggtcaagaattgatgggttctaggacccatcgtgctacttgttctcctcagtcaatcgacattacaaaaagtaagtcttttgatgcttggagattccttactgatacacgaagctgcatgttgggcagttcaacaagcagacttccagtgcagtactctggctatacccaccaatctgtaagcttcggtgaatctattggattcccagaggtcttgcaaggtcaagaaatttctcagacagttcctccgtttcaaggaatgttgcctgatgcatgttcagcgaaaagcagatatgaattaaagaattatgtgtgcaccccagctaccatgaatggactatcatctgcaaatgaaggatattgtctctccctgtcaactgtgccaccttctccaccttccagtcttatgttataccaaacaggggtaccacagcttgaattggcaagcaagaacaatgacaaaagtggaaatgacagccaaccagccttgcgacagcacaagttgctcagtgaaactagctgggaccagtttaaaattggaaaggcttcaacacctgggaatgctactaagcctggtaatggtggaagggaggttgacagaactagttgccgcctttttggtttttccttgaccgagaagattatcccaacagacaaagatggtgaaaaggaagtgagttatgaaactgattgccaaaatccacggatgctagacttgtttgggtacaattgcagtacgcctggtgctcttcatgccctttgtgctgctcctttgggaatatgatgctacttgagtaactggtatgctctagttcttccttactgctgaaaattcacttctcctgtacctttggacctcgtactctaccattatccaaaagctaatttggtcactgacatttacacagggagggatacgtacatgtggagacgcagccactccacgcttcatcccagatgtaaacggcatcggtctggttatggtcccaccgttcctgatgctttgcatgtaggtattgctgcctcacgcctgaatacctacgtgcggtcaggcgaataaagcgactcgattgtatgtttgactgcagctctagctgtcgagtcggaagggcgatgatgtttatcgtcgttaatgtaccatcggcaccctgtttatgcagaaatgtggacctaattattatgaacttatttccttagttctatgtatggttagcttctgatctagacctagttatgagcctatttcagaagtgctatgtatggtttgcttgtcaacatttgtttctgtatcggtacaaatcactatgtttgtatgtttattatgcacttcttttgtgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0753500, RefSeq:Os01g0753500