Os01g0754200

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0754200| Description = Glycosyl transferase, family 48 protein| Version = NM_001050813.1 GI:115439996 GeneID:4325131| Length = 6854 bp| De...")
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Gene Name

Os01g0754200

Description

Glycosyl transferase, family 48 protein

Version

NM_001050813.1 GI:115439996 GeneID:4325131

Length

6854 bp

Definition

Oryza sativa Japonica Group Os01g0754200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33397350..33404203

Sequence Coding Region

33398612..33403984

Expression

GEO Profiles:Os01g0754200

Genome Context

<gbrowseImage1> name=NC_008394:33397350..33404203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33397350..33404203 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcttgctgcggaaccgccgcgccgcggcggcggcgggttcgggggagcagacggtggtgcaggcggcgtacaacatcatcccgatccaggacgtggtgatgcacggggaccacccgtcgctgcaggtgccggaagtgcgggcggcggtggaggcgctgtcgcacgcgtcggacttcccggcgccgccgctggcccgcgtctgggacccgcaccgcgccgacatcttcgactggctcggcgccaccttcgggttccaggcggacaacgtccggaaccagcgggagcacctggtgctcctcctcgccaacgcgcagctccgcgccgcgccgggattccccaaggaccaccccatcgacgtcctccacctcaccgtcgcccgcggcatccgcaggaagctcctcaagaactacacctcctggtgcgcctacctcggccagaagcgccacttccgcgtgcccagcggcggcggcggcggccgccgcaccggcgccgccaccggcaacgacgtccgcatggacctcctctacacggcgctgtacctgctcatctggggggaggccgccaacctgaggttcatgccggagtgcctctgctacatcttccactacatggccctcgacctccaccacgtcgtcgagcagtccatcgacatcgagacagggcggcctgcgatgcccgccgtgtgcggcgaggacgccttcctcatccgcgtggtgactccgatctacaacgtcctcaagaacgaggtggaggccagccggaacgggaccaagccgcactcggcgtggaggaattacgacgatgtcaacgagtacttctggagccgacgagttttcaagcggctccggtggccgctggatccatcgaggagcttctttgtggagcctggaaagactgggcgcattggcaagactggctttgttgagcagcggtcattctggaatgtctaccgaagtttcgatagggtatgggtgatgcatattctgttctttcaagctgcgatgattgttgcatgggatggtaaaaccccatgggttagcctcagattccgggacatccaggtccgggtgctgtctgtgttcatcacttggggtggactgcgctttgttcaggcaatgcttgatgcgggtactcagtacagtctcgtgtcgagggagacaaaaacagtggctgttcggatggtgctcaaggtgcttgttgctgcagggtggacaatcacattcagtgtgctctataagcgaatgtgggatcagcggtggcgagatcgcaggtggtcctttgctgccaataccagagtgctgaattaccttgaggcagctgctgtgtttgtcatcccgcaagtgcttgcgattgtgctcttcatcatcccttggattcgaaattttctggagaaaaccaattggaaaattctatatgtgctgacctggtggttccaaacacgtacatttgttggccgtggtctgagggaaggtctcattgataacatcaagtactccatattctgggtgtgcctccttgtttctaagtttagcttcagctactttctccagattaagccgatggtggggccaacaaaggtaatcttcaaactccatgacatcaagcgtaactggtttgagttcatgcctcacacagagcgccttgcagtaatcatcctgtggctcccagttattatcatttacctcatggatatccagatatggtatgcagtcttctcatcactaacaggggcgcttatcggccttttctcgcatctgggggagattcgcagtgttgagcagctgcgcttgaggttccagttctttgcaagtgcaatgcagttcaatttaatgccagaggagcacctggataccgttcatggtggcatccgcagcaagttctatgatgcaatcaatcggctgaagctgagatatgggtttggccgtccatataggaagattgaagcaaacgaggtggaagctaagaggtttgcactggtttggaatgagatcattcaaacatttagggaagaggacatcattagtgataaagagcttgggcttcttgagctgccggcagttgtgtggagaattcgtgtggtacggtggccttgtttgctgctaaaaaatgagcttcttcttgctctcagtcaggcagcagagctggtggctgatgacaggacacattggaacaagatatgtaacaacgagtacaggcgatgtgcagtaattgaagcttatgacagcatacgtcacttgctgctggaaataatcaaggagagaactaatgaacacattattgtcaatcagctattccttgcatttgatggtgcaatggaatatggaaagttcactgaagaatataggctaaccttattacctcaaattcataagtatgtaatctccttagtggagcagcttctattgaaggacaaggatcagatcaagatagttcgtaccttgcaggatctgtatgatcttgcagtgcatgattttccaaaaatcaagaaggactttgaacagctgaggcgagaggggctagcactatcaagaccaaccgaatctcagctgctttttcaggatgccataaaatgcccagatgacaatgatgttagcttctataagcaggtgagaagactccatacgattctcacatccagggattctatggacgatgttccaaagaaccccgaggctcgtcggcgcataactttcttcagcaactccctgttcatgaacatgcctcgtgctcccaccgttcagaggatgatggcattcagtgttttaaccccatattacaatgaagatgttctgtacaacaaggaccagcttcgtcgtgagaatgaagatggcatctcaatcttgttttatcttcaaaagatttatgaagatgattggaaaaactttttagagcgcatgcaaagggaaggaatggctagtgatgatggcatttgggctggaaaattccaggatctccgactttgggcctcgtacagggggcagaccttagcacggactgtgaggggaatgatgtactactacagggctctcaagatgcttgcttttcttgataatgcatctgaagtagaaattacagagggaacaaaacagctggcttcttttggttcagttcagtatgagaatgatgtatatcccatgaacgggggtttatcacaacgacctcgaaggaggttagagagaggaacaagtactgtaagtcaattgtttaaaggccaggaagatggtgctgctatcatgaagtacacctatgtggtcgcttgccaaatatatggaaaccagaaaaaggcgaaagatcaacgtgctgaagatatcctaactcttatgaagaaaaatgatgccctccgtgttgcttatgtcgatgaggtccatcctgagattggtgatacgcaatactattctgtccttgttaaatttgatcctgtcttacagagagaggttgagatataccgtattaggttgccaggtcaactgaaacttggggagggaaaacctgaaaatcagaaccatgccatcatattcacacgaggtgatgctgtgcaaacgattgatatgaaccaggataattattttgaggaggccctcaagatgcgtaacctactagaacagtacgactattatcatggaagccagaaaccaacgcttttgggcgtccgggagcatgtttttactggatcggtgtcttcacttgcttggttcatgtctgcacaagaaacaagctttgttacccttggacagcgagttctagctaatccgttgaaggttcggatgcattatgggcatcctgatgtatttgatcgcctttggtttttaacccgaggtggtataagcaaggcatccagagtaatcaatatcagcgaggacatatttgcaggtttcaactgtaccctacgcggtggcaatgttagccaccatgagtatatccaggttggtaagggacgtgatgttgggctcaatcagatatcgatgtttgaagcaaaggtttctagtggcaatggtgaacagaccctaagtagggatatctacagacttggtcataggctggatttctttaggagtctttctgtgttctatacaacagtaggattctacttcaacacaatgatggtggtcttgacagtttatacatttgtttggggacgcctctatctagctctgagtggtcttgaggctggaattcagggtagcgctaatgctaccaacaataaagccttgggtgccgttctgaatcagcaatttgtcatacagcttggcctcttcactgccttgccaatgattatagagaactctcttgaacagggttttctgcctgctgtctgggattttttcactatgcaaatgatgttttcgtccgtgttctacacattttccatggggacgaaaagccattactatggccggacaattcttcatggcggtgctaagtatcgtgctactggccgtggttttgttgtgcagcataagagttttgctgaaaattacaggctgtatgctaggagccacttcataaaggcaatagaacttggaatagtattgactgtgtatgcagctcacagtgtgattgcaagggatacacttgtttacataatcatgatgatatctagctggtttctagtggtatcatggatcatggctccatttgcttttaatccatctggctttgattggttgaaaacagtgtatgactttgatgatttcatgaactggatctggtaccctggtagtatcttttctaaggctgaacacagctgggaagtttggtggtttgaggagcaggatcatctacgaacaactggtctttggggaaagattttagaaatattgttagatctcagatacttcttttttcagtatggggttgtataccagttgaagatcgcaaatgaaagcagaagtattgctgtttatctgctttcctggatttgtgtggctgtgattttcggcatttttgtcctaatgtcatatgctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtcattattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcattgacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgctcaagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggcacgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctggttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggcctccagatatcccgcattcttgctggcaagaaaacaattgcagtttga</cdnaseq>

Protein Sequence

<aaseq>MSLLRNRRAAAAAGSGEQTVVQAAYNIIPIQDVVMHGDHPSLQV PEVRAAVEALSHASDFPAPPLARVWDPHRADIFDWLGATFGFQADNVRNQREHLVLLL ANAQLRAAPGFPKDHPIDVLHLTVARGIRRKLLKNYTSWCAYLGQKRHFRVPSGGGGG RRTGAATGNDVRMDLLYTALYLLIWGEAANLRFMPECLCYIFHYMALDLHHVVEQSID IETGRPAMPAVCGEDAFLIRVVTPIYNVLKNEVEASRNGTKPHSAWRNYDDVNEYFWS RRVFKRLRWPLDPSRSFFVEPGKTGRIGKTGFVEQRSFWNVYRSFDRVWVMHILFFQA AMIVAWDGKTPWVSLRFRDIQVRVLSVFITWGGLRFVQAMLDAGTQYSLVSRETKTVA VRMVLKVLVAAGWTITFSVLYKRMWDQRWRDRRWSFAANTRVLNYLEAAAVFVIPQVL AIVLFIIPWIRNFLEKTNWKILYVLTWWFQTRTFVGRGLREGLIDNIKYSIFWVCLLV SKFSFSYFLQIKPMVGPTKVIFKLHDIKRNWFEFMPHTERLAVIILWLPVIIIYLMDI QIWYAVFSSLTGALIGLFSHLGEIRSVEQLRLRFQFFASAMQFNLMPEEHLDTVHGGI RSKFYDAINRLKLRYGFGRPYRKIEANEVEAKRFALVWNEIIQTFREEDIISDKELGL LELPAVVWRIRVVRWPCLLLKNELLLALSQAAELVADDRTHWNKICNNEYRRCAVIEA YDSIRHLLLEIIKERTNEHIIVNQLFLAFDGAMEYGKFTEEYRLTLLPQIHKYVISLV EQLLLKDKDQIKIVRTLQDLYDLAVHDFPKIKKDFEQLRREGLALSRPTESQLLFQDA IKCPDDNDVSFYKQVRRLHTILTSRDSMDDVPKNPEARRRITFFSNSLFMNMPRAPTV QRMMAFSVLTPYYNEDVLYNKDQLRRENEDGISILFYLQKIYEDDWKNFLERMQREGM ASDDGIWAGKFQDLRLWASYRGQTLARTVRGMMYYYRALKMLAFLDNASEVEITEGTK QLASFGSVQYENDVYPMNGGLSQRPRRRLERGTSTVSQLFKGQEDGAAIMKYTYVVAC QIYGNQKKAKDQRAEDILTLMKKNDALRVAYVDEVHPEIGDTQYYSVLVKFDPVLQRE VEIYRIRLPGQLKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYFEEALKMRNLLEQY DYYHGSQKPTLLGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHP DVFDRLWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVSHHEYIQVGKGRDVGLNQ ISMFEAKVSSGNGEQTLSRDIYRLGHRLDFFRSLSVFYTTVGFYFNTMMVVLTVYTFV WGRLYLALSGLEAGIQGSANATNNKALGAVLNQQFVIQLGLFTALPMIIENSLEQGFL PAVWDFFTMQMMFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVVQHKSFAENY RLYARSHFIKAIELGIVLTVYAAHSVIARDTLVYIIMMISSWFLVVSWIMAPFAFNPS GFDWLKTVYDFDDFMNWIWYPGSIFSKAEHSWEVWWFEEQDHLRTTGLWGKILEILLD LRYFFFQYGVVYQLKIANESRSIAVYLLSWICVAVIFGIFVLMSYARDKYAAKQHLYY RVIQSGVIILAVLVLIIFLKFTKFQIIDIFTSLLAFIPTGWGLISIAQVIRPFIESTV VWASVVSVARLYEILLGVFVMAPVAFFSWLPGFQEMQTRVLFNEAFSRGLQISRILAG KKTIAV</aaseq>

Gene Sequence

<dnaseqindica>220..5592#gatgcaaactgttgaagcgatcacgcacgcctcgcttccgcctaatccgaaggagacaagcaaatcaaacaagcgaacaaaagcggcagcccgaataaaccagctgcgcagcatgtgattcccacctaggttcctcccatcatcccgtgtacttcttcgcttcaaagggctcacactcgtcgagtgatttttttgcagctggctgcgtgagacggggagatgagcttgctgcggaaccgccgcgccgcggcggcggcgggttcgggggagcagacggtggtgcaggcggcgtacaacatcatcccgatccaggacgtggtgatgcacggggaccacccgtcgctgcaggtgccggaagtgcgggcggcggtggaggcgctgtcgcacgcgtcggacttcccggcgccgccgctggcccgcgtctgggacccgcaccgcgccgacatcttcgactggctcggcgccaccttcgggttccaggcggacaacgtccggaaccagcgggagcacctggtgctcctcctcgccaacgcgcagctccgcgccgcgccgggattccccaaggaccaccccatcgacgtcctccacctcaccgtcgcccgcggcatccgcaggaagctcctcaagaactacacctcctggtgcgcctacctcggccagaagcgccacttccgcgtgcccagcggcggcggcggcggccgccgcaccggcgccgccaccggcaacgacgtccgcatggacctcctctacacggcgctgtacctgctcatctggggggaggccgccaacctgaggttcatgccggagtgcctctgctacatcttccactacatggccctcgacctccaccacgtcgtcgagcagtccatcgacatcgagacagggcggcctgcgatgcccgccgtgtgcggcgaggacgccttcctcatccgcgtggtgactccgatctacaacgtcctcaagaacgaggtggaggccagccggaacgggaccaagccgcactcggcgtggaggaattacgacgatgtcaacgagtacttctggagccgacgagttttcaagcggctccggtggccgctggatccatcgaggagcttctttgtggagcctggaaagactgggcgcattggcaagactggctttgttgagcagcggtcattctggaatgtctaccgaagtttcgatagggtatgggtgatgcatattctgttctttcaagctgcgatgattgttgcatgggatggtaaaaccccatgggttagcctcagattccgggacatccaggtccgggtgctgtctgtgttcatcacttggggtggactgcgctttgttcaggcaatgcttgatgcgggtactcagtacagtctcgtgtcgagggagacaaaaacagtggctgttcggatggtgctcaaggtgcttgttgctgcagggtggacaatcacattcagtgtgctctataagcgaatgtgggatcagcggtggcgagatcgcaggtggtcctttgctgccaataccagagtgctgaattaccttgaggcagctgctgtgtttgtcatcccgcaagtgcttgcgattgtgctcttcatcatcccttggattcgaaattttctggagaaaaccaattggaaaattctatatgtgctgacctggtggttccaaacacgtacatttgttggccgtggtctgagggaaggtctcattgataacatcaagtactccatattctgggtgtgcctccttgtttctaagtttagcttcagctactttctccagattaagccgatggtggggccaacaaaggtaatcttcaaactccatgacatcaagcgtaactggtttgagttcatgcctcacacagagcgccttgcagtaatcatcctgtggctcccagttattatcatttacctcatggatatccagatatggtatgcagtcttctcatcactaacaggggcgcttatcggccttttctcgcatctgggggagattcgcagtgttgagcagctgcgcttgaggttccagttctttgcaagtgcaatgcagttcaatttaatgccagaggagcacctggataccgttcatggtggcatccgcagcaagttctatgatgcaatcaatcggctgaagctgagatatgggtttggccgtccatataggaagattgaagcaaacgaggtggaagctaagaggtttgcactggtttggaatgagatcattcaaacatttagggaagaggacatcattagtgataaagagcttgggcttcttgagctgccggcagttgtgtggagaattcgtgtggtacggtggccttgtttgctgctaaaaaatgagcttcttcttgctctcagtcaggcagcagagctggtggctgatgacaggacacattggaacaagatatgtaacaacgagtacaggcgatgtgcagtaattgaagcttatgacagcatacgtcacttgctgctggaaataatcaaggagagaactaatgaacacattattgtcaatcagctattccttgcatttgatggtgcaatggaatatggaaagttcactgaagaatataggctaaccttattacctcaaattcataagtatgtaatctccttagtggagcagcttctattgaaggacaaggatcagatcaagatagttcgtaccttgcaggatctgtatgatcttgcagtgcatgattttccaaaaatcaagaaggactttgaacagctgaggcgagaggggctagcactatcaagaccaaccgaatctcagctgctttttcaggatgccataaaatgcccagatgacaatgatgttagcttctataagcaggtgagaagactccatacgattctcacatccagggattctatggacgatgttccaaagaaccccgaggctcgtcggcgcataactttcttcagcaactccctgttcatgaacatgcctcgtgctcccaccgttcagaggatgatggcattcagtgttttaaccccatattacaatgaagatgttctgtacaacaaggaccagcttcgtcgtgagaatgaagatggcatctcaatcttgttttatcttcaaaagatttatgaagatgattggaaaaactttttagagcgcatgcaaagggaaggaatggctagtgatgatggcatttgggctggaaaattccaggatctccgactttgggcctcgtacagggggcagaccttagcacggactgtgaggggaatgatgtactactacagggctctcaagatgcttgcttttcttgataatgcatctgaagtagaaattacagagggaacaaaacagctggcttcttttggttcagttcagtatgagaatgatgtatatcccatgaacgggggtttatcacaacgacctcgaaggaggttagagagaggaacaagtactgtaagtcaattgtttaaaggccaggaagatggtgctgctatcatgaagtacacctatgtggtcgcttgccaaatatatggaaaccagaaaaaggcgaaagatcaacgtgctgaagatatcctaactcttatgaagaaaaatgatgccctccgtgttgcttatgtcgatgaggtccatcctgagattggtgatacgcaatactattctgtccttgttaaatttgatcctgtcttacagagagaggttgagatataccgtattaggttgccaggtcaactgaaacttggggagggaaaacctgaaaatcagaaccatgccatcatattcacacgaggtgatgctgtgcaaacgattgatatgaaccaggataattattttgaggaggccctcaagatgcgtaacctactagaacagtacgactattatcatggaagccagaaaccaacgcttttgggcgtccgggagcatgtttttactggatcggtgtcttcacttgcttggttcatgtctgcacaagaaacaagctttgttacccttggacagcgagttctagctaatccgttgaaggttcggatgcattatgggcatcctgatgtatttgatcgcctttggtttttaacccgaggtggtataagcaaggcatccagagtaatcaatatcagcgaggacatatttgcaggtttcaactgtaccctacgcggtggcaatgttagccaccatgagtatatccaggttggtaagggacgtgatgttgggctcaatcagatatcgatgtttgaagcaaaggtttctagtggcaatggtgaacagaccctaagtagggatatctacagacttggtcataggctggatttctttaggagtctttctgtgttctatacaacagtaggattctacttcaacacaatgatggtggtcttgacagtttatacatttgtttggggacgcctctatctagctctgagtggtcttgaggctggaattcagggtagcgctaatgctaccaacaataaagccttgggtgccgttctgaatcagcaatttgtcatacagcttggcctcttcactgccttgccaatgattatagagaactctcttgaacagggttttctgcctgctgtctgggattttttcactatgcaaatgatgttttcgtccgtgttctacacattttccatggggacgaaaagccattactatggccggacaattcttcatggcggtgctaagtatcgtgctactggccgtggttttgttgtgcagcataagagttttgctgaaaattacaggctgtatgctaggagccacttcataaaggcaatagaacttggaatagtattgactgtgtatgcagctcacagtgtgattgcaagggatacacttgtttacataatcatgatgatatctagctggtttctagtggtatcatggatcatggctccatttgcttttaatccatctggctttgattggttgaaaacagtgtatgactttgatgatttcatgaactggatctggtaccctggtagtatcttttctaaggctgaacacagctgggaagtttggtggtttgaggagcaggatcatctacgaacaactggtctttggggaaagattttagaaatattgttagatctcagatacttcttttttcagtatggggttgtataccagttgaagatcgcaaatgaaagcagaagtattgctgtttatctgctttcctggatttgtgtggctgtgattttcggcatttttgtcctaatgtcatatgctcgagacaagtatgctgcaaaacaacacctttactaccgggtcatccaatctggtgtcattattcttgcagtgctagtgctgataatatttctgaaatttactaaatttcaaatcattgacatcttcacaagccttttggcattcattcctactggttggggcttgatttccattgctcaagtgattagaccattcattgagtctactgtggtctgggccagtgttgtttctgtggcacgtttgtatgagatactgcttggggtgtttgttatggcgccagttgcattcttttcctggttgcctggatttcaggaaatgcagacgagggtacttttcaatgaagctttcagcagaggcctccagatatcccgcattcttgctggcaagaaaacaattgcagtttgaggtacagtacaataagccttgatgaattatttggcctgtttagaattttttttttgtgagaagcctatttagattttctttagcattaaattggattaacagatatatctttatattttaaactgttcgcattttgctatggaaatttgatgcttacataagaactaaaaagacaaaatttagtttctatttggatctggttgtatctcctttcattacgggcggggggacaaaaacttatcgatccgagaaaagagcctattgtccaataagagctttcagtaaatagctcttaccttccctgtcaaacagaaacctaagtgtgcatcaaagaaagtgtggtcactttgataaaattttacttattaaaattaacaaaatactgtcgttacataggtactccctccgtccctaaatatttgacgccattaacttttttaaacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcatatcatttgatttattgttaaatatacttttatgtatacatatagttttacatattccacaaaagtttttaataagacgaacggtcaaacatatttaaaaaagtcaacgacgtcaaatatttagggacggagggagtataaaagtctcatgtttatcctctacctgctttttatgtacttgcacgaaaccttttgatgcttctaatgaagaaatcagctcgcccttgtatttccatctgttattggttatagtcagactcacagatgacacctgcttagcactaccaccatacctataccaatcaaagctgaactgtgatttttatgaaaattgtgtaaaacgtatacctctgttttatggcagtacactaaccatctgctgtaacacaagataacgatagcaggggcttaacttggtcatatttcttgcaattgtaaagatcaaactgtgcattttcagtcttacttccgatgattctgactgctgattttcttttgccaggctctaacaaggttatcgcagttaggccgtcctccgtcacctctgtacagcttcttatgcaatgtggaaggctttctgtttactgatatagcttagatccatattgaaccttttagatggctgattagcttcagtcatcttactctagatgttcagatttgtactgagtaatttaggcctctccagttttgcaccttcttagagctagttgtatgtagatgattctgttgcagcattacccgtgaactctaatggcttgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0754200, RefSeq:Os01g0754200