Os01g0754500

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0754500| Description = Protein of unknown function DUF1421 family protein| Version = NM_001050815.1 GI:115440000 GeneID:4325133| Length = 4...")
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Gene Name

Os01g0754500

Description

Protein of unknown function DUF1421 family protein

Version

NM_001050815.1 GI:115440000 GeneID:4325133

Length

4821 bp

Definition

Oryza sativa Japonica Group Os01g0754500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33407462..33412282

Sequence Coding Region

33407724..33409109,33410458..33410727,33412074..33412202

Expression

GEO Profiles:Os01g0754500

Genome Context

<gbrowseImage1> name=NC_008394:33407462..33412282 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33407462..33412282 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccggctccggcgtccccgccggccgcggctcccgcagcttcgacttcggcgccgacgacgtgctctgctcctacgacgacttcgccgccccctccgagcccaagcgccccgatccggccgacaaggactttcacgacagtagattggggagaccatttggaaaagcttatgaacaagagagttacggcaaggaggatgtactttttgctgttgagaagtgcatgaagaaatatgctgataatttgctgcgatcgcttgagggaattactaatcgtctttcacaactggagatctattgctataagcttgagagatccatgggtgaacttcgaagtgatgtgctccgtgatgagactgatcaaagattgaagtctcttgagaaacatcttcatgaagtgcacagatctattcaaatccttagggacaagcaagagttagctgaaactcagaaggaattagccaaatttcaacttacacatgacacatctaaaaagaaggaagatatgccaacaccatctttccctgagcaaaagacgcttgaagaaaaggcagatgcacctggtcagcagctggcgattgttttgcctcatcaggtgaactcatcccttgcacctagagcttctcaaccagtccaacagtacaaagatcagacagtgcagcagccacctagctcttctgtaccacagcaggaccgttatgttcttagccaagccattgtttactacccacagcgtcaagctccaggcattcaggatacacaggggcagcaagtacaaccagaggtgcagtacttgccagtaaggccttcagcaacgcaagatgttcctgtccatgcttcatctcaacagtctcaggcagcaaatcaaacccagcctcagtctttccctccctaccagcagcagtggccccagcaatcttcccagccggctcctgcaccagtggcccagccacagccgactttctcgcagccatttcctccacctgtgcagcagccccaattatctaacactcagcagtttcctccacaaccaatgcagcagccccaactatctaacactcagcagtttgctcctcaaccagtgcagcagcctaatgctcaacagtttcctccgccaccagtgcaaccgcagcaatctaacactcagcttcctcctcaggcaatgcaaccacaacagcatcctcctgtacaaaatcagatgaggcctcaaactccaccaaactaccctcattatcaaccccaccagtccttgaaccctccccctgaaactctacctggcagcatggctatgcaaggaccatacaacacggttgctccggcagcggggagccgttctgaagtgccatattcatacggaggacctggcatgccaccaccgcagcacaacatgcaaaggcagcagctacctcctccaagccagggctctttcggacctccaagtaaggggggctatgccggcccgccacaatatgcgccgcagggcagctcacatggctacaacactgcatatggctaccccccaagtggtccttcagcagcccaggcacctcagatgcctccagctccaggtaatgttggtatgagtcacccaggttcgcatcagatgatgcgcggccatccttatggggaaatgattgagaaggcaatcaccatgggatatcccagggagcaggtgatgaatgttattcagaggatgaccgagagtggccagccgatggatttcaacacattgctggaccggttgaacgaagcagggtccggagcaccccctcgtgcgtggtga</cdnaseq>

Protein Sequence

<aaseq>MSGSGVPAGRGSRSFDFGADDVLCSYDDFAAPSEPKRPDPADKD FHDSRLGRPFGKAYEQESYGKEDVLFAVEKCMKKYADNLLRSLEGITNRLSQLEIYCY KLERSMGELRSDVLRDETDQRLKSLEKHLHEVHRSIQILRDKQELAETQKELAKFQLT HDTSKKKEDMPTPSFPEQKTLEEKADAPGQQLAIVLPHQVNSSLAPRASQPVQQYKDQ TVQQPPSSSVPQQDRYVLSQAIVYYPQRQAPGIQDTQGQQVQPEVQYLPVRPSATQDV PVHASSQQSQAANQTQPQSFPPYQQQWPQQSSQPAPAPVAQPQPTFSQPFPPPVQQPQ LSNTQQFPPQPMQQPQLSNTQQFAPQPVQQPNAQQFPPPPVQPQQSNTQLPPQAMQPQ QHPPVQNQMRPQTPPNYPHYQPHQSLNPPPETLPGSMAMQGPYNTVAPAAGSRSEVPY SYGGPGMPPPQHNMQRQQLPPPSQGSFGPPSKGGYAGPPQYAPQGSSHGYNTAYGYPP SGPSAAQAPQMPPAPGNVGMSHPGSHQMMRGHPYGEMIEKAITMGYPREQVMNVIQRM TESGQPMDFNTLLDRLNEAGSGAPPRAW</aaseq>

Gene Sequence

<dnaseqindica>3174..4559#1556..1825#81..209#gcttccctccccccctcccctccctttccttcccctccaaggaagctatccccgtctcgcctaaaccctagcgcgccgcgatgtccggctccggcgtccccgccggccgcggctcccgcagcttcgacttcggcgccgacgacgtgctctgctcctacgacgacttcgccgccccctccgagcccaagcgccccgatccggccgacaaggtattacttcctcccccccccccccccccgccctctctcggcggcaacccacctttgatccctcgtgaatcgtggtgcgtgatgatcgcgtgcagagctctgaccgaggcttattgccgcacgatttcgcctcagcggtgtcgtattcccgtgaatctattcgttcaactgaatagtgtggaaacggtccgatgaaaattggctgaacagcactgaatagtttcagttttttttttgcccaattgtaacgttcacatcgatttggttataggctcgttggtactatgcagccatcgcttgctatttcattttcttcctgacgaatgtgttattccagctatgcctatctgttgtaattcagagaatatcatggatttattttattgtgtgcatcaaggtttatatggtacctgctatacttgggattttcaggtcttattttgattaaacccacactgaattcctgatgtgcagtgtaggtttgtcttgaatggtcaatataggctggagatagtcaatgagaaattcatttaataagctatcaattgaaatattcagtgggttatttctgtgagggccactgcacgagagagaaagatgcctataggatatagttttcagataattttttctgacattctgttgaataagatttatgcaagtcatgactatttgattcacacgtaacattaataccgcctatagttttcatgttcagtaaaatttttgttacatataaattagtgaccatgtgtccaggacattgctattctaggtaaggaacacaatctaatgtttagagaaaaggtggattgacgttgattttgtacttgataagtttacctatatgttcagtctgtttagggattattgtcttgcttatctatttgttcagtccatttatgtttagagattattgtctttatgggtgaatgttgaaagtccattatagcattctggaaacttctgatgacacccttggtgttgctggaggatggtattctatgttctaacaggtgaaatataaataatcacctgtgggttggtgtgttttgggatgtgttcttggtaggagggactccttgatccctcctatgtaaatatttctttcttcttaatgaaatgaagcgcagttctcctgcatcgtccaaaattatataaataatcaaattaagctattactgacatagttggagagagcattacaaaaatctgatgtatttgtttcttaaaaaatgaaatttgtcaaagatatctgcatttttacaagcaaaattaatttaatgattataatagtagaaatccttgtgctatattcatccctcattcttgtacttgtgcagcaggactttcacgacagtagattggggagaccatttggaaaagcttatgaacaagagagttacggcaaggaggatgtactttttgctgttgagaagtgcatgaagaaatatgctgataatttgctgcgatcgcttgagggaattactaatcgtctttcacaactggagatctattgctataagcttgagagatccatgggtgaacttcgaagtgatgtgctccgtgatgagactgatcaaagattgaagtctcttgagaaacatcttcatgaagtaagtaaatcactattttaagaaaaaatatattttgagactagatccagtatttcacattttccaccctttcagtttctgcactgaagggggacagttcttttgcatccagtgtaattatgatcatgtcatatactcatccatatattataccccctccattccaaaatatgagcatttctgcacgtatttcaaaatttatatgcctatttggacatccccgcgtgcagacaaaaatgcttatattttggaacggatggagtagccttttgtgttgattgacatgtacagtacatgttttctttatttgttgtgacaacttaccttttctttatactgtgtatgtgattttgctccttcgctttaaatgcatgctccaattcttatatgtatttaaaataccatctagtgaatacatagggaaatattaggcttatgtatgtttagcctagaggccctaatctcctaagttgttgtggtttttgtgggctatggttctttagtattttgggctgtgattattgtttttttcctttgaacaaaaagtacaccatttccaatctctaagaaatgtgatggtgctataccaccgtccctttcagacaaagggagagatgtcttcctggtctctcaaaggctgctccctactgacctgttcagaggttaatgcacataaatgtccttcttgttttgtactttcttctgataaactagtcttgttgcctgttgtgcactcgaagcctggaatccactcttgaatatactcagtatgtctaatgtataccctgtgactcaaccaggattggcaacactcctctgtatttaaattggcaactgtggttgataaataagtgatccctgtgatggatctgttctaacatcttataagttcagagtgcacaaatgctaagggtatacatcatctcatatgttccatgccagacatgcatctgttgagccataatggccatttggagtcttaggtgctaccacgagcttcaagatgacacttatttagaatttggagattaaggcctgaccacaaacttcgagtatttctagcaaacagaatatttaagtatagttcattcttggtattcatcgagattgtcctgcagtctaaaatgacatgcacgttgcaaaacattttggctatcacagagctgttgatgggcacatgaccgtatccaagttcagaagatgtgacaatttattattaaccaacaattcaatctccaaatgtttaatttctttactgtttatgtactgtattttatatctttgagcattaattctctgttgagaagttttcaagtttcaactctaatcaaattttcaaatgatgcaggtgcacagatctattcaaatccttagggacaagcaagagttagctgaaactcagaaggaattagccaaatttcaacttacacatgacacatctaaaaagaaggaagatatgccaacaccatctttccctgagcaaaagacgcttgaagaaaaggcagatgcacctggtcagcagctggcgattgttttgcctcatcaggtgaactcatcccttgcacctagagcttctcaaccagtccaacagtacaaagatcagacagtgcagcagccacctagctcttctgtaccacagcaggaccgttatgttcttagccaagccattgtttactacccacagcgtcaagctccaggcattcaggatacacaggggcagcaagtacaaccagaggtgcagtacttgccagtaaggccttcagcaacgcaagatgttcctgtccatgcttcatctcaacagtctcaggcagcaaatcaaacccagcctcagtctttccctccctaccagcagcagtggccccagcaatcttcccagccggctcctgcaccagtggcccagccacagccgactttctcgcagccatttcctccacctgtgcagcagccccaattatctaacactcagcagtttcctccacaaccaatgcagcagccccaactatctaacactcagcagtttgctcctcaaccagtgcagcagcctaatgctcaacagtttcctccgccaccagtgcaaccgcagcaatctaacactcagcttcctcctcaggcaatgcaaccacaacagcatcctcctgtacaaaatcagatgaggcctcaaactccaccaaactaccctcattatcaaccccaccagtccttgaaccctccccctgaaactctacctggcagcatggctatgcaaggaccatacaacacggttgctccggcagcggggagccgttctgaagtgccatattcatacggaggacctggcatgccaccaccgcagcacaacatgcaaaggcagcagctacctcctccaagccagggctctttcggacctccaagtaaggggggctatgccggcccgccacaatatgcgccgcagggcagctcacatggctacaacactgcatatggctaccccccaagtggtccttcagcagcccaggcacctcagatgcctccagctccaggtaatgttggtatgagtcacccaggttcgcatcagatgatgcgcggccatccttatggggaaatgattgagaaggcaatcaccatgggatatcccagggagcaggtgatgaatgttattcagaggatgaccgagagtggccagccgatggatttcaacacattgctggaccggttgaacgaagcagggtccggagcaccccctcgtgcgtggtgatttcgtcctgggttgggtttggacctctctccatcccggcacggcgctcatacgtgtgcaaagagtggtactatcgtgtagtagttgaataaataagatttgaagtgatgccatctgttgactgttgcgtatttgtacgatgtacatattatacattgatcttaatcttcatgtacttcctgcacgtgtaccaccaacttctttgcaattggaccatttcagcagatctgtgctaatccaaattattgccaggtatattgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0754500, RefSeq:Os01g0754500