Os01g0756200

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0756200| Description = Similar to VirE2-interacting protein VIP1| Version = NM_001050821.1 GI:115440012 GeneID:4325139| Length = 2346 bp| ...")
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Gene Name

Os01g0756200

Description

Similar to VirE2-interacting protein VIP1

Version

NM_001050821.1 GI:115440012 GeneID:4325139

Length

2346 bp

Definition

Oryza sativa Japonica Group Os01g0756200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33483861..33486206

Sequence Coding Region

33483944..33484371,33484502..33484592,33485540..33485666,33485825..33485976

Expression

GEO Profiles:Os01g0756200

Genome Context

<gbrowseImage1> name=NC_008394:33483861..33486206 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33483861..33486206 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagctcccgcccaagatcccggtggcggcgccggggcaccaccagcactgggcctcggccgggggcgccggcgacgcggcgtgggcggatgagttcgccgagttcgcggcgtcgcggcggggcgcgcaccgccggtcgctgagcgactccgtggcgttcgtcgaggtggcgccggcggggtgcggggcgggcggcgagttcgacaggctcgacgacgaccagctcatgtctatgttccccgacgagggcgggtcgtcggccccggggtccgacaacggcggcagcgacagcgacggcggcggcgacaagcacgccgcggcgcagagcgacgacgggcagcacgccgccggggagccgacgcaggagcaggcggcggccacctcgccgacggagctgatccgggaccccaagagggtcaagaggatactggctaatcggcagtcggcccagaggtcgcgagtgaggaagcttcagtacatctccgagctcgagcgcagcgtcacaaccctgcagaacgaggtatccgtgctgtcccctcgggtggcgtttctggatcagcagcggacgatcctgaccgtcggcaacagccacctcaagcagcggatcgcggctctagcacaggacaagattttcaaggatgctcatcaggaggcgttgaggaaggagatcgagaggctgaggcaggtataccagcagcagaacaccaagttgtccggtggtctggccgctgaccacgcacatgtccatggcggcccgccgcctgtgcgagcagagaaggagctcatgagctag</cdnaseq>

Protein Sequence

<aaseq>MAQLPPKIPVAAPGHHQHWASAGGAGDAAWADEFAEFAASRRGA HRRSLSDSVAFVEVAPAGCGAGGEFDRLDDDQLMSMFPDEGGSSAPGSDNGGSDSDGG GDKHAAAQSDDGQHAAGEPTQEQAAATSPTELIRDPKRVKRILANRQSAQRSRVRKLQ YISELERSVTTLQNEVSVLSPRVAFLDQQRTILTVGNSHLKQRIAALAQDKIFKDAHQ EALRKEIERLRQVYQQQNTKLSGGLAADHAHVHGGPPPVRAEKELMS</aaseq>

Gene Sequence

<dnaseqindica>84..511#642..732#1680..1806#1965..2116#gcgccgtccaacgcgcgcgccagagctaggtggttagcccaagctcgcgagatcgatcgctactataggctaaggacacgtacatggcgcagctcccgcccaagatcccggtggcggcgccggggcaccaccagcactgggcctcggccgggggcgccggcgacgcggcgtgggcggatgagttcgccgagttcgcggcgtcgcggcggggcgcgcaccgccggtcgctgagcgactccgtggcgttcgtcgaggtggcgccggcggggtgcggggcgggcggcgagttcgacaggctcgacgacgaccagctcatgtctatgttccccgacgagggcgggtcgtcggccccggggtccgacaacggcggcagcgacagcgacggcggcggcgacaagcacgccgcggcgcagagcgacgacgggcagcacgccgccggggagccgacgcaggagcaggcggcggccacctcgccgacggagctgatccgggaccccaagagggtcaagaggtaagcgagcgaacgcgcccggttgggcactgcgtccatgcatgcatctagtgatcaattacaaatcactttacgacactataaattcctcgattaattaccgtgttctcttctttggaaatgtcttcaggatactggctaatcggcagtcggcccagaggtcgcgagtgaggaagcttcagtacatctccgagctcgagcgcagcgtcacaaccctgcaggtatacatacatatacgtgcaatacgaacatatcaacgacgacaacaccaaactcaaaactagttatcacaccctataccaatccgctcttcgagctctagcaagccgagttgacgctcgtttcgaaacgcggcacaattctgaatcctagctaggaaaccgaacaccctacctcaactctacaaactcacgtcagatcaaccgttcgtggctgtgcaatctgcattctgtgcgatgtagtaagcgacccgtcgatgagtttcacggacagaagtggcgccagtttgagaccgaccgatggacacagccacactggttggctggcaatagcacacaatgtggcgaggagatgagcgagagcgtgagcccccaccctcgtgcatatgcacgcctgcggatgtcttacttcacctcaccccccgtacggcaccaaccagcccacgtagacgtagtggcaatggcatgtcatgccatgatccagacgcacatggttctgcttctgcatggatggattggccagtgggcagtggtgtgttgtgcgtggtccctttcctagctagcttagcttgcttgcgcgacatctgattaaattagtgccctattaagaaatgtgtggtagtactactgtttgtgcaagtagtagtactagcatttaacaactgttgtgtagtgtactccatgtaacatgctccgtttgtgtgcacagtacgttgggtcatatagagcgctctgatcgtgggtgcacatggagggatcggtcgagacagttacaaatcaaatgtgtatcagtagcgtatccgaacaagctagatgcagggtaattcagggtgccattagtgtctgaccactacggctagatcttctttgacaagcaggcatcagtttggtttattcccaaattaaacatcgccattttggttttgtgtaaaatgtgatatgttttgcagaacgaggtatccgtgctgtcccctcgggtggcgtttctggatcagcagcggacgatcctgaccgtcggcaacagccacctcaagcagcggatcgcggctctagcacaggacaagattttcaaggatggtgagttaaatttgtagtaaaattttttacttctctgcaacatgctgcattttctgttgctgctgcttcccatcatgcctgaaggagcatctctttactttccattatctgaaaaaagaaaccactcatgagaattaatcaatagcctgcatgtgcagctcatcaggaggcgttgaggaaggagatcgagaggctgaggcaggtataccagcagcagaacaccaagttgtccggtggtctggccgctgaccacgcacatgtccatggcggcccgccgcctgtgcgagcagagaaggagctcatgagctagctgatcaatttgcctactgtcccctgtgcagtctgccttagcattaactttggagggaacattgcatcatgaacctgtggatgttttcttcttcttcttctttttgtttttttattcttttacattgacttgtgtattcttgattcggatgttgattggagttctggtttacaatgggaattgtgggagatgtcaataagaaaatgtgaactgcaataagattaactgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0756200, RefSeq:Os01g0756200