Os01g0756600

From RiceWiki
Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0756600| Description = Protein of unknown function DUF642 family protein| Version = NM_001050824.1 GI:115440018 GeneID:4325142| Length = 40...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0756600

Description

Protein of unknown function DUF642 family protein

Version

NM_001050824.1 GI:115440018 GeneID:4325142

Length

4074 bp

Definition

Oryza sativa Japonica Group Os01g0756600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33505140..33509213

Sequence Coding Region

33505284..33505386,33507608..33507775,33507872..33508207,33508336..33508928

Expression

GEO Profiles:Os01g0756600

Genome Context

<gbrowseImage1> name=NC_008394:33505140..33509213 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33505140..33509213 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggagattcggcgaggaggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctcccatctggcctcggccgctgcggtggaggatggcttgctcagcaatggtgactttgagacagcaccagctggtggttttgtcaaatctgcttcagttgctgaaggtgcatcatcgatccctggctggacgatcaatgggacagtcgagctcatctcagcaggccagcaccagggtggcatgattcttattgttccacagggggatcatgctgtacgtcttggaaacgacgcaagtatagggcaggtggtgcaggttgagaagggctcagagtatgctatcacgttcagtgctgcccgaacgtgtgcacagctagagtcactcaatgtgtctgtgctcggtggtgcatcacagacagtggacctgcagacattgtacaacatagaaggctgggatgcatatgcattggcttttcaggcaacagatgagcaggcgagccttgagttcaggaaccctggtatggaggatgatccgacttgtggacctatccttgacaacgttgccataaagaagctcttcactccagacaaaccaaaggatactgtggtgtcaaatggagactttgaggagggtccatggatgtttccaaacacgagctttggggtgcttctcccaaccaacctcgatgagcagacgtctgccttgcctggctggatgattgagtcaaaccgagctgtccgctttgtcgactctgaccaatacaccgttccccaagggaagcgcgccattgagcttctatcagggaaggaaggcatcatctcacagatggtcgagacaacccctcagaaagagtacagcctgacattcacattgggctcagcaggggattcatgccagccaccaatggctgtcatggcattcgcaggtgaccaggcccagaacttccactactcgcccatgggtaatgccacaagccaggctgcgaatgtgacattcacagcacgagctgagaggacgcgggtagcgttctacagtgtgtattacaacacgagaagcgacgaccacagctcgctctgtgggccagtgatcgatgatgtgcgcgtctggggcttgaatggagctgctgggttgaaggcaagtattgggctgctgcttggcattgttagcattgtcagtctgatgttgttctga</cdnaseq>

Protein Sequence

<aaseq>MEGDSARRLALLGLCLGLLLLAPSHLASAAAVEDGLLSNGDFET APAGGFVKSASVAEGASSIPGWTINGTVELISAGQHQGGMILIVPQGDHAVRLGNDAS IGQVVQVEKGSEYAITFSAARTCAQLESLNVSVLGGASQTVDLQTLYNIEGWDAYALA FQATDEQASLEFRNPGMEDDPTCGPILDNVAIKKLFTPDKPKDTVVSNGDFEEGPWMF PNTSFGVLLPTNLDEQTSALPGWMIESNRAVRFVDSDQYTVPQGKRAIELLSGKEGII SQMVETTPQKEYSLTFTLGSAGDSCQPPMAVMAFAGDQAQNFHYSPMGNATSQAANVT FTARAERTRVAFYSVYYNTRSDDHSSLCGPVIDDVRVWGLNGAAGLKASIGLLLGIVS IVSLMLF</aaseq>

Gene Sequence

<dnaseqindica>145..247#2469..2636#2733..3068#3197..3789#agcccagtgagagtaggactggctcggctcgctcactcggtcagctgcacacacactgcacttcggctcactctctccactgttcttcttcctcggcgaggggggaaggaggaggcgagagctcgaggcggctaggaggaggagatggagggagattcggcgaggaggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctcccatctggcctcggccgctgcggtggaggatggtatgctttgctgtctcttcgatcgtttctgtttcttgcccttgctggaggatcagtagtgctgctgttcttttgatgctggaggatccaaggcagtattttgacatatttgtggaatatttggttggagtttgtggggatgggtagttttctgcatcacagatctcagcaaatagagaaatcatgcgatttagtacctctccgcatcccacatttgtataacaaatgcggagttcattagcacatatacatagcactgaggagaaatttgaagggtgggtaggagaagagaaaaataatcccctaggaaaatggtgtggtaaagcatgccaagaagttagctttgtgccctaggaatcaagagatgtggttgcactcgtgaggaaggagtgtgatagcccccccccctttatttttttttctctttttgtagagcatatggttcagtatacctgcaaagtaaaggtcctagaaagtaggaaggagccttggcccttgatagctgagataacatttaccaaggctgtgtttagatccaaagtttggatccaaactttagtccttttccatcacatcaacttgtcatacacacccaacttttcagtcacatcatcttcaatttcaatcaaaatccaaattttgcgctgaactagacacagcccaattatccaaacctgtcctgttactgaagtctgaacagccaaaaactgaccagttatactgccacttgtgccaaagctttcctgggaatgtagttttttgcagtgaccagtgtaaccacttcttttaagtacattaattggataaaaatatttatacctgcttaatacacatcccccttccttacttgcctttgagtttagtctgcatgtatatacctttataaaattattccttttctatgattcatgcaattttatgtttgaaaatgactaaaaacccccaagtgagctgtcctgtatgatgagagagacattctgttgggtgcagaatgctgctaacaaaaccacttgaaagattcagaaaatcttcaggcttgtaactgaaagagtttcagtttcctatcttgtccaaaggaggtattatgaacctctatgcaaggacgaagttgcatgaaagtcaaaatgaaatgtggcgtagtagtaaacttggatccaggccgaacagcacagcagcagaaaccagtgagccagtgtcctgcaaacgcgttcaatgaaccgtccagtaaaaaggtcaaatggcttattaaaaggatggccgtgagggtccatgcctgtctctttaatttttcgtaccttaacctccccagaattacgctacgggccgtggtgatttcctccggacatgggcagctctggagtctggaccactgcatgaggctctccatggtgggatggtggatagggtagggttggtggatgtttcactttcaccacataatatcgtcgtgcatagtcacatggctgtccttgtaaggacattgaagcacagtaaagtggcctacccgcagtgccccaatgaaatgcattggatgtacaatagaaaaacatggacatgttttctctcctatagtactgaattagaggttttagctgttaaattttggcacaggagatttaattatggtacagtttatctgtgcaaccgtgctttcaactgggagggtagccataaaaacaagcttgagaagtcactcacttataagaaaaaccagtcctagaaatgaactttcccaaactctactgtgatggttcatttcacttgttacacatgtttccgtagaaaggttcccgtaaatgtcctaggtttttatctgaaatttatttttttttgtcactgttatgcatttgatttgagttgtacagtgccattcaattcagtctgagttgtacattattttatatatgtcataataaagatagtccagcgcattgtgtactaggttcagtgggggatcatatttacggttcgtcctatcctacaaaagggtagagctacacaacttaaaatagttatggttttattgcattgcagacttgcagtagatgtacttggcttcacttgcatgggaacgctttcacatataacatgggtagatattaagtagagttcttgagaaatatattttctgcctcttggtcttggattgcagctgtgttacttttggagatctaaattgaccttggcacttacatgagcaagtgatctctttgcacaacaggcttgctcagcaatggtgactttgagacagcaccagctggtggttttgtcaaatctgcttcagttgctgaaggtgcatcatcgatccctggctggacgatcaatgggacagtcgagctcatctcagcaggccagcaccagggtggcatgattcttattgttccacagggtatcctacagagcttttctccttctgtcctctgatcaatcaagttgcaccactgatttgtattcgacatgtttaatatttggattttcatttcaggggatcatgctgtacgtcttggaaacgacgcaagtatagggcaggtggtgcaggttgagaagggctcagagtatgctatcacgttcagtgctgcccgaacgtgtgcacagctagagtcactcaatgtgtctgtgctcggtggtgcatcacagacagtggacctgcagacattgtacaacatagaaggctgggatgcatatgcattggcttttcaggcaacagatgagcaggcgagccttgagttcaggaaccctggtatggaggatgatccgacttgtggacctatccttgacaacgttgccataaagaagctcttcactccagacaaaccaaagggtatgacagttctgcttatctctatacctattagagtgtatatccttacaggatgtcttaagagagctagaggtgctctagtttgtatggttcttaagtcatcacttggtattgtcttctttcaacagatactgtggtgtcaaatggagactttgaggagggtccatggatgtttccaaacacgagctttggggtgcttctcccaaccaacctcgatgagcagacgtctgccttgcctggctggatgattgagtcaaaccgagctgtccgctttgtcgactctgaccaatacaccgttccccaagggaagcgcgccattgagcttctatcagggaaggaaggcatcatctcacagatggtcgagacaacccctcagaaagagtacagcctgacattcacattgggctcagcaggggattcatgccagccaccaatggctgtcatggcattcgcaggtgaccaggcccagaacttccactactcgcccatgggtaatgccacaagccaggctgcgaatgtgacattcacagcacgagctgagaggacgcgggtagcgttctacagtgtgtattacaacacgagaagcgacgaccacagctcgctctgtgggccagtgatcgatgatgtgcgcgtctggggcttgaatggagctgctgggttgaaggcaagtattgggctgctgcttggcattgttagcattgtcagtctgatgttgttctgaatctcttagtgattgtggtcgaaagatatataaacctcttctgtaagtatgaggaggccactagttttggtagtaagcttgaagtttctattaggttgagtaatgtgagattgtgagcttaggctaaagctacctgaagctatgtatggctgtttctgttgctttcttttgtgattcagaaagtaacatgccattgtgggaagtgtgtggtggttagtgtgccaagagcttgtaatgttcaaatatcatcccttcaatatattagaaatttcaggagttgatccg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0756600, RefSeq:Os01g0756600