Os01g0757800

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0757800| Description = UMUC-like DNA-repair protein domain containing protein| Version = NM_001050832.1 GI:115440034 GeneID:4325305| Length...")
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Gene Name

Os01g0757800

Description

UMUC-like DNA-repair protein domain containing protein

Version

NM_001050832.1 GI:115440034 GeneID:4325305

Length

6392 bp

Definition

Oryza sativa Japonica Group Os01g0757800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33586149..33592540

Sequence Coding Region

33586247..33586322,33586447..33586567,33586666..33586777,33586866..33587033,33587115..33587279
,33587383..33587486,33587605..33587724,33587932..33588055,33589155..33589268
,33589377..33589568,33589916..33590012,33590093..33590241,33591161..33591248
,33591327..33591591,33592208..33592241

Expression

GEO Profiles:Os01g0757800

Genome Context

<gbrowseImage1> name=NC_008394:33586149..33592540 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33586149..33592540 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggtggcgaggccggagccgcaggagccgcgggtgatcgcccatgtcgacatggattgcttctacgtccaagttgagcagcggaggaacccggagctcagggggcagccgaccgccgtggtgcagtacaacgactggaaaggcggcgggctgattgccgtcagctacgaggcccggaagttcggcgtgaagaggtccatgcgtggtgatgaggccaagatggtctgtccaagtatcaatttggttcaggttccggtggcccgtgacaaggccgatcttaatgtttaccgtagtgctggctctgaggttgtcacaatcctctcgaccaaggggaagtgtgagcgagcatccatcgacgaagtttatcttgaccttactgatgcagccaaggaaatgcttttagaatctccaccggagttattggagttgatttttgaggaggccacaaagtcaaatatcctgggccttccttctgatgtcagcaacagagaagatagcgtgagggcatggctttgtcgagccgatgctgattaccaggataagttactatcttgtggggctataattgttgcgcaattacgggtcaaggttttggaggaaacccaattcacatgttctgctggtattgctcacaataagatgttagcaaaacttgtcagtgggatgcacaaacctgctcagcagacagttgttccatcatcagcagttcaagattttctagtatcactgcccataaagaagatgaagcaacttggtggtaagcttgggagttccttgcaggatgaccttggggtcaatactgttggtgatcttctaagttttacagaggacaaattacaagagtactatggagtaaatacagggacgtggttatggaagattgcaagaggtattagtggagaagaagttgaggatcgtcttctaccaaagagccatgggtgtggaaagacatttcctggcccaaaagcattaaagaataatgcttctgttaagacatggctggatcgactttgtgaagaactgagcgaacggattcagtctgatttgaaccagaataagagaattgctcaaacactaactctctatgccagggcatgtaagaaaaacaagtctgattcaatcaagaaatttccttccaaatcttgtccgttgcgttatgggactgtcaaaattcaagaagatgcaatgaagctatttgaatctgggcttcatgatttcttgggttctcagaacacaaaatggagcataacatctctttctgtttcagcaagcaaaatattcgacataccaattggaacaagctctatcttgagatacattaaaggaccaaattccactgtttcaccagctaacctcgattgttcttctttacctgaggatccatctcttggtaacaagttatatatagcacctaatcatgaagaacactgtgaaccatcattatctgagaaagaagactatggaaacaatagtaatttagccaaacagtgtcaaataaaggaagaaaaaaaggtgtcaaagaagttaactgaagttaagggaacttgctctattctgaaatttctttcacaaagtcctgtactcagtgagaaaagaaaaattgacagcttaatttgcagtcatccaggtcctgaaagttcttcagaaccgaataaagctgaagaacacaaggctgcgcagtatgttgataggaacaagtttaacactgctgggagtaactctgccagcagtagcacatggatgttcaacgttgaagatatcgatccagccgtagtggaagaactgccgccggaaatacaaagagaaatacatggatggattcgcccgccaaagcaatcaagctcaaagacacggggttctaccatttcgtcttacttccaacctgcaaagagctattctctgcaagcgattcctatactgctgtaa</cdnaseq>

Protein Sequence

<aaseq>MPVARPEPQEPRVIAHVDMDCFYVQVEQRRNPELRGQPTAVVQY NDWKGGGLIAVSYEARKFGVKRSMRGDEAKMVCPSINLVQVPVARDKADLNVYRSAGS EVVTILSTKGKCERASIDEVYLDLTDAAKEMLLESPPELLELIFEEATKSNILGLPSD VSNREDSVRAWLCRADADYQDKLLSCGAIIVAQLRVKVLEETQFTCSAGIAHNKMLAK LVSGMHKPAQQTVVPSSAVQDFLVSLPIKKMKQLGGKLGSSLQDDLGVNTVGDLLSFT EDKLQEYYGVNTGTWLWKIARGISGEEVEDRLLPKSHGCGKTFPGPKALKNNASVKTW LDRLCEELSERIQSDLNQNKRIAQTLTLYARACKKNKSDSIKKFPSKSCPLRYGTVKI QEDAMKLFESGLHDFLGSQNTKWSITSLSVSASKIFDIPIGTSSILRYIKGPNSTVSP ANLDCSSLPEDPSLGNKLYIAPNHEEHCEPSLSEKEDYGNNSNLAKQCQIKEEKKVSK KLTEVKGTCSILKFLSQSPVLSEKRKIDSLICSHPGPESSSEPNKAEEHKAAQYVDRN KFNTAGSNSASSSTWMFNVEDIDPAVVEELPPEIQREIHGWIRPPKQSSSKTRGSTIS SYFQPAKSYSLQAIPILL</aaseq>

Gene Sequence

<dnaseqindica>99..174#299..419#518..629#718..885#967..1131#1235..1338#1457..1576#1784..1907#3007..3120#3229..3420#3768..3864#3945..4093#5013..5100#5179..5443#6060..6093#gaaaagaaaaaaaaaaggaaaaagggaatagggaagcgagggcggagtacggcgcgcttcgccgttgccggaggcggcgggggtgagggcagcgagcgatgccggtggcgaggccggagccgcaggagccgcgggtgatcgcccatgtcgacatggattgcttctacgtccaaggtcacctacctacctcctcctctctctcttcccccctcgccgccgtcgccacgactcgacccccaaactcgcggaatgatgcctctgacgtgagggagtgagcgtttattttattttgccgcagttgagcagcggaggaacccggagctcagggggcagccgaccgccgtggtgcagtacaacgactggaaaggcggcgggctgattgccgtcagctacgaggcccggaagttcggcgtgaagaggtgcgatgagagcccgctctctccttctccgcggaggcgatttgatcggctgggttttctgacggatcgattgtatgctcattgttgtggttattcaggtccatgcgtggtgatgaggccaagatggtctgtccaagtatcaatttggttcaggttccggtggcccgtgacaaggccgatcttaatgtttaccgtagtgctggctctgaggttggtctgtgcatcttaattggtacaattgacaatggaaaatgaaggtgcttccatggcattgacagttttgcgtctaaactctcaggttgtcacaatcctctcgaccaaggggaagtgtgagcgagcatccatcgacgaagtttatcttgaccttactgatgcagccaaggaaatgcttttagaatctccaccggagttattggagttgatttttgaggaggccacaaagtcaaatatcctgggccttccttctgtaatatttgttctccacgatttaattgttgtttctctgcaatttgatatgaatgtgaccaatagggcttcatatgtgcaggatgtcagcaacagagaagatagcgtgagggcatggctttgtcgagccgatgctgattaccaggataagttactatcttgtggggctataattgttgcgcaattacgggtcaaggttttggaggaaacccaattcacatgttctgctggtattgctcacaataaggtttatatgcattcctttctttcgattgaagtttggtctcttttactctgtaaacctctcttcctattgcaatcctcacccaagatgttgctgtgttttgtagatgttagcaaaacttgtcagtgggatgcacaaacctgctcagcagacagttgttccatcatcagcagttcaagattttctagtatcactgcccataaagaagatgtaatgagctaatgtgacacctccatctttgctagtttcttggtttctgttggacaaagtttttcaaacatcctatttatctggtctcatggttgtgttgtttgcttaaattatgcaggaagcaacttggtggtaagcttgggagttccttgcaggatgaccttggggtcaatactgttggtgatcttctaagttttacagaggacaaattacaagagtactatggagtaaatacagggtaacctggtgcttgcatttatttttttgctctactgttgtttggttgccctactgattttatctttagtacatgacttaactttagagctgatagaaggctagttttatgcattacaaggaagcatacttcatgcagattttacaactttcggatgtcatgtctagttaataataactcagcttataaccgtttaatctcacgcaggacgtggttatggaagattgcaagaggtattagtggagaagaagttgaggatcgtcttctaccaaagagccatgggtgtggaaagacatttcctggcccaaaagcattaaagaataatgcttctgtaagtacttacactctgtcatttttgtttagggatgcttatagcaaagcatatccaggaagtcttttgatgactatgttcatttggtataagccttgactacttgctttggtccatcaaagtcataagtagtgatataagctcatcactccaatcaacaattgtcatgggcattgggtcgggagtccggcccaatgggaacgatatcctcacccctcacgataagtacgtaactcacttgcatagagtcagggtctgttgggattaggttaaggagttctccatctatataaggaaggatcctattccaggtcagttaggcattagattgagttatctcttagtgccaaccggccctgccttcccggcgcgacgtcgataggactccgtcgcgctgtttaggttcagggacagtgctgttacttcctcttttcatcccaaataatcctagcacgtgacaacaattgatattggaagaatcagatcctcatttagctgtcatttagtgacagtttactgatatatccagtgtctgtgcgccttgattgatcatgtaataatctaatcagataccttctacacctcatttctagagcactaggctggagcctaccctcctacttgagtaccagatgctcctatcaaatactccctccgtcccataatataaggattttgacattttggttgcactgtttgaccactcgtcttattcaaaaaaattcgtgcaaatataaaaaacgaaaatttgtgcttaaagtactttggataataaagtaagtcacaaaaaaaaaataattccaattttttttaataagacgaatggtcaaacaattcaagcaaaatgtcaaaatcccttatattaggggacggagggagtactagtttggctagtggcatgttgttgtgtccattcaattacattaagatatgttgcgagcctaattaaataggtcctttgtattgcctgattcaaatcccacatgtgtttgcacagctccatatatgtatttcctgtgtagtttagagaagtttatgttctaaatattttacaaatgggaatttcatggtcctttaataatatcaggttcatgtttaggttaagacatggctggatcgactttgtgaagaactgagcgaacggattcagtctgatttgaaccagaataagagaattgctcaaacactaactctctatgccagggcatgtaaggtacttggtgcaaattatctttttcccccctaggattgcataaattagctcttagtttctgtaacttaaaatgaatatatagtttatttactgattgctttgctacagaaaaacaagtctgattcaatcaagaaatttccttccaaatcttgtccgttgcgttatgggactgtcaaaattcaagaagatgcaatgaagctatttgaatctgggcttcatgatttcttgggttctcagaacacaaaatggagcataacatctctttctgtttcagcaagcaaaatattcgacataccaattgtatgcatactttaactttatcagtaataagtatatcgatttgctctcatgtttaaataaccaacatccctggagaaataaggatcagagcaaaatgattatcttgtttctttgattgcaatacaccatgcatttattgatattgcattagcttctgctctcaaaagttgagggttatttctgaaattgttatctgatgtacagaagcttttttaacattaacaaatgtgctataacattgtatctagtttgtcactacttgtactgtgtcagcaggccttgaatatgattagacatacaagcacgttatgaatttatttccttcattttctttttatatttttcagggaacaagctctatcttgagatacattaaaggaccaaattccactgtttcaccagctaacctcgattgttcttctttacctgaggatccatctcttggtaagattaataagttcagtaataccagtctgtatttttgtcatctcttacagtacttatctgttgacatgcttctctaggtaacaagttatatatagcacctaatcatgaagaacactgtgaaccatcattatctgagaaagaagactatggaaacaatagtaatttagccaaacagtgtcaaataaaggaagaaaaaaaggtgtcaaagaagttaactgaagttaaggtcagatgttctttccctctttggatacatgaaaccagctccttgtggatcagttaccgggtcttgaatccttgaacctacattaccagggttaagattcacaaaatcattattcagtttagtcaatcaaaatgtggttagttttagtttacttgtgtagttactgggccttgaatccttggaagtgatatagaagaatgctatatttgtgttggaaaagaaggagcaatgtatcccagcagttagtgatttgttttttcagaatttttaggagtaatgattaatgatgttctactatgtcagtaaatagattaataatattgactcctttcttgtgtatctcgtattcctttagttgctaaacttccttttaagtagacatttagatccttgctaatatattttttcaactactccctccgtttcataatataagagtttctagcattgctcatattcatataaatgttaatgaatctagagacacatatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagtagtacagaacttccattataattatattttccatgtccttaacttaacctgccccttttgcccttagaatccatttttaaccagataatctgtaatccagtggcataatttatatctgctccatcttattatccacagtaaggcgtagcatgagccaagatagttattaagttcagcttgaaaagttatcagccccagctggtccacctccttaactctaaaacaaacatgtgtcctggtttgaaaaatatctttactcgcaaattatgaagtacaagtctgaaattctagtttcttgttaagtttattatttgaaccaattactcacccagatgtcccactgcaaatggttcagggaacttgctctattctgaaatttctttcacaaagtcctgtactcagtgagaaaagaaaaattgacagcttaatttgcagtcatccaggtaaggggtgtttttattcgcgcaatacaaatactggtcactgctacaattgttcttgctaatttcagataattttaggtcctgaaagttcttcagaaccgaataaagctgaagaacacaaggctgcgcagtatgttgataggaacaagtttaacactgctgggagtaactctgccagcagtagcacatggatgttcaacgttgaagatatcgatccagccgtagtggaagaactgccgccggaaatacaaagagaaatacatggatggattcgcccgccaaagcaatcaagctcaaagacacggggttctaccatttcgtcttacttccaacctgcaaagaggtcaggataggtagaccatgagatgcatatttctaacatgttgattcgtctcctggcatgacctctcccctgtagattgtaggagcatcagcttgatgcgccaacaaatgggcgtcaactgaaagaccagcaaaatgccaaagtgttcgcccttgtgaatagtatttgcattgtaaatttaattgacagtggaactaacaaatactattagtactaaaatttatttacggtccagtataacaaccgtacgactataaaccaaattagaacaggaagctaaggaaacttaagttgatctgacggactgacagtaaggacactttattgattaattgaattcagaagacatattaaactgtatttcttcgtgaacaatcattacatagccttgttactcactacctgtacttatgagcttaggcggaacagaacgaaaaaaattatctccctgtataacgtatctcctcatagtattcccaatccctgcctgttacaataacgtatctcctcagtggccttaatccctacctaacacctgtttattctatccctgtataaatattttcaattacaatttcgagcggtttaaataagatctaaaacttcgttcctgcagctattctctgcaagcgattcctatactgctgtaattcaaggaaaacagatgctgccagcgttttcgcttgctaattaaacaataacctgagcatataacttctgagatcatgccaagagagcagaaggccattttataacttcgcgtgttcagagaaaactgggaggtccaatgcatcccttgcaatggcttgatcttcgtcagttatggccaatgcttgtgatatattttcctgcatagaaaaaatactgaagctgctaagtatgcttgaacttgcatacaagatttataagctgtggatataagcagaactgtaataagttatgcttactg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0757800, RefSeq:Os01g0757800