Os01g0758900

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0758900| Description = Protein of unknown function DUF688 family protein| Version = NM_001050841.1 GI:115440052 GeneID:4325608| Length = 28...")
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Gene Name

Os01g0758900

Description

Protein of unknown function DUF688 family protein

Version

NM_001050841.1 GI:115440052 GeneID:4325608

Length

2832 bp

Definition

Oryza sativa Japonica Group Os01g0758900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33675340..33678171

Sequence Coding Region

33675541..33676674,33676786..33677661,33677748..33677786

Expression

GEO Profiles:Os01g0758900

Genome Context

<gbrowseImage1> name=NC_008394:33675340..33678171 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33675340..33678171 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgagcggatcgtctgatggcggaggggggcaagcggatcgacctgggggcgccgctccggtcggtgcgccacgccgacgcgctgccctaccacaaggccgacctcaactccggccccgtccgccaccccggcgcggtgcccttcgtctgggagcagcggcccgggcagccaaagagcgtccgcacccgccgcgcgccgccgtcgcccacgaccgcgtcccatcctcagccgctggagcacggcgtggaggatgagatcgacgggagcccataccacgacgccctcggggagcactatgtggggatactccatggcgtggacgcgtcccccgcctgttcccggactggcgctccggcgccggcgccggcgcgtgatgagaagagggcgcaggtggcggaggcggcggtgttacaggcgaagaaggaagtgacggagaagcaggtggtgtccgtggcggcggtactgcggaagggagatgacgacgacgacgatgaggagaggttctcggacgcgctcgacacgctctccaggacggagtccttcaccgtgaactgcagcgtcagcggcctcagcggcatgccagagcccacctcccgtgccgccgccggcgccgaggcaggcgtacgcggcatcatgatggatagattcctcccggctgcgcaggcggtggccataggctccccgcagtacaccttccggaaggccggggcagccagcgccacgagcaattctggccgcgagcttgcgcgtgcagctgggtctaacgcgagtggaagcagtggcgatgatcccgggaggaggacgcccgtccagctcccctaccagcatttgcctcccaattatttgtcttgcagctatcccagacgtgaggagcaggaagatgaagacgacgacgatgactatgatgtgcatagcacccggggttttgcctccaagggatgtggcttgctccctagtctctgtgtgaagggttcattgttacttctgaatccaatgcctgcgatgaagcgtggcaagccgcgggggaatgggagagtccgggagttcgcatccaaaggcaggggacgaggggcgccgagtccgcttgcccggagctcacaaaacaagcatcttgggtgtgcttccaacgggtcctgggaggatgtatacaagcacaaattagagcagaagtatgttcgtccaggagaggatgggaggagcaagctgacaagtgaatcaaaccagctgacgttctggagtgactcgcaggcgggcaatgggtcttcaccattccatcattccgcaggtggtggtatgtctccctattacagggatgttgtcctgtcatcatcgagtaaggcagatgagtcttttggaacaggggtaaaagaagacaaaatgagtagtagtaatggttccagctcacttggaagagaccatgatcgtggttcattgcttggatcagaccgcagtagtttaaaggggtcaagctccattagctcagggctggatagaccagtgcatgtagaatcaatggatcaccgtggagatattgactcagaaactagccactcggttctgttactggattcaaggacatcactggatgctggtgggtgtggctctcagcttggagaacagattgtcgggaaaaaccctattgggaaaggtgaagataatgatccattgacagaaagggtctctgaagttacagaatgcacgttgttagcaccttctgaaaagttaagatcagtgaatttggatgatgggaaaacttctggtcatctggaagatagtagtgtttccaaaagggatatgcctttgcaatctctactcccattaccagtcccaagatcaccttcagaatcttggctttctcgcactttaccatccgtaacaagcaaaccaccagtgccatcttttcttggaattcaattgcagtcgaagaaacaaactccctgggcctcaattcagccaaaggagaataatgttaaacctcctaggccacgacagataagatttgcagatgtggtagaaaggcctaattcattggatgctgagatatga</cdnaseq>

Protein Sequence

<aaseq>MRADRLMAEGGKRIDLGAPLRSVRHADALPYHKADLNSGPVRHP GAVPFVWEQRPGQPKSVRTRRAPPSPTTASHPQPLEHGVEDEIDGSPYHDALGEHYVG ILHGVDASPACSRTGAPAPAPARDEKRAQVAEAAVLQAKKEVTEKQVVSVAAVLRKGD DDDDDEERFSDALDTLSRTESFTVNCSVSGLSGMPEPTSRAAAGAEAGVRGIMMDRFL PAAQAVAIGSPQYTFRKAGAASATSNSGRELARAAGSNASGSSGDDPGRRTPVQLPYQ HLPPNYLSCSYPRREEQEDEDDDDDYDVHSTRGFASKGCGLLPSLCVKGSLLLLNPMP AMKRGKPRGNGRVREFASKGRGRGAPSPLARSSQNKHLGCASNGSWEDVYKHKLEQKY VRPGEDGRSKLTSESNQLTFWSDSQAGNGSSPFHHSAGGGMSPYYRDVVLSSSSKADE SFGTGVKEDKMSSSNGSSSLGRDHDRGSLLGSDRSSLKGSSSISSGLDRPVHVESMDH RGDIDSETSHSVLLLDSRTSLDAGGCGSQLGEQIVGKNPIGKGEDNDPLTERVSEVTE CTLLAPSEKLRSVNLDDGKTSGHLEDSSVSKRDMPLQSLLPLPVPRSPSESWLSRTLP SVTSKPPVPSFLGIQLQSKKQTPWASIQPKENNVKPPRPRQIRFADVVERPNSLDAEI </aaseq>

Gene Sequence

<dnaseqindica>202..1335#1447..2322#2409..2447#gtttgccccacgaccgccgcgagtagagcaagtaagctcgcaccgcaccgaaaccgcagtgcgttctccttttctagtgttcgcccgccgccatccacacgccgtgccgcagatcctatctcccgtccgcggcggccgaagcaatcggacgaattcgtccccccctgcttcgcctcctcttcgctgtgtagtttgtgagcgatgcgagcggatcgtctgatggcggaggggggcaagcggatcgacctgggggcgccgctccggtcggtgcgccacgccgacgcgctgccctaccacaaggccgacctcaactccggccccgtccgccaccccggcgcggtgcccttcgtctgggagcagcggcccgggcagccaaagagcgtccgcacccgccgcgcgccgccgtcgcccacgaccgcgtcccatcctcagccgctggagcacggcgtggaggatgagatcgacgggagcccataccacgacgccctcggggagcactatgtggggatactccatggcgtggacgcgtcccccgcctgttcccggactggcgctccggcgccggcgccggcgcgtgatgagaagagggcgcaggtggcggaggcggcggtgttacaggcgaagaaggaagtgacggagaagcaggtggtgtccgtggcggcggtactgcggaagggagatgacgacgacgacgatgaggagaggttctcggacgcgctcgacacgctctccaggacggagtccttcaccgtgaactgcagcgtcagcggcctcagcggcatgccagagcccacctcccgtgccgccgccggcgccgaggcaggcgtacgcggcatcatgatggatagattcctcccggctgcgcaggcggtggccataggctccccgcagtacaccttccggaaggccggggcagccagcgccacgagcaattctggccgcgagcttgcgcgtgcagctgggtctaacgcgagtggaagcagtggcgatgatcccgggaggaggacgcccgtccagctcccctaccagcatttgcctcccaattatttgtcttgcagctatcccagacgtgaggagcaggaagatgaagacgacgacgatgactatgatgtgcatagcacccggggttttgcctccaagggatgtggcttgctccctagtctctgtgtgaagggttcattgttacttctgaatccaatgcctgcgatgaagcgtggcaagccgcgggggaatgggagagtccgggagttcgcatccaaaggcaggggacgaggggcgccgagtccgcttgcccggagctcacaaaacaagcatcttgggtgtgcttccaacggggtactgatgcagatacatgttacacagtccatttcatgagttcagaatttatgctacttgttattagtgctagggatgagtaacatctcactgtatattgtgttgcagcagtcctgggaggatgtatacaagcacaaattagagcagaagtatgttcgtccaggagaggatgggaggagcaagctgacaagtgaatcaaaccagctgacgttctggagtgactcgcaggcgggcaatgggtcttcaccattccatcattccgcaggtggtggtatgtctccctattacagggatgttgtcctgtcatcatcgagtaaggcagatgagtcttttggaacaggggtaaaagaagacaaaatgagtagtagtaatggttccagctcacttggaagagaccatgatcgtggttcattgcttggatcagaccgcagtagtttaaaggggtcaagctccattagctcagggctggatagaccagtgcatgtagaatcaatggatcaccgtggagatattgactcagaaactagccactcggttctgttactggattcaaggacatcactggatgctggtgggtgtggctctcagcttggagaacagattgtcgggaaaaaccctattgggaaaggtgaagataatgatccattgacagaaagggtctctgaagttacagaatgcacgttgttagcaccttctgaaaagttaagatcagtgaatttggatgatgggaaaacttctggtcatctggaagatagtagtgtttccaaaagggatatgcctttgcaatctctactcccattaccagtcccaagatcaccttcagaatcttggctttctcgcactttaccatccgtaacaagcaaaccaccagtgccatcttttcttggaattcaattgcagtcgaagaaacaaactccctgggcctcaattcagccaaaggagaataatgttaaacctcctaggccacgacagataagatttgcagatgtaatacttatttttcttctgttttgcttatatttccaattgtcacagagccattgctgaacattcattttggctgcttgttttaggtggtagaaaggcctaattcattggatgctgagatatgatgtcttccctcaagaccaatatctgttcataatgccttgaaggacagcacggccatgtatctgccagcgcccaaattttccctggatgcccccctcagtttgctgtcgcaatcttggctattagcagcttttttgtataccagtacataggtaattgtcgttgtgcatgccatatttgcgtactctgtgaactcaaggtaagttggcgttggcttaaatctgttgtaaatcacatatctatacagcatagcttctgtttgcttccttacagtccatacatcatgtagtactctttagtccataaaaggttgagttgatcatcaaatgtaattgcatgtatcatagaataaaatggcacaagaagtcaggcttccatgcctttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0758900, RefSeq:Os01g0758900