Os10g0508300

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0508300| Description = YABBY protein family protein| Version = NM_001071556.2 GI:297610756 GeneID:4349074| Length = 3956 bp| Definition = ...")
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Gene Name

Os10g0508300

Description

YABBY protein family protein

Version

NM_001071556.2 GI:297610756 GeneID:4349074

Length

3956 bp

Definition

Oryza sativa Japonica Group Os10g0508300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19926559..19930514

Sequence Coding Region

19926559..19926654,19928054..19928131,19928397..19928472,19929078..19929126,19929662..19929860
,19929966..19930514

Expression

GEO Profiles:Os10g0508300

Genome Context

<gbrowseImage1> name=NC_008403:19926559..19930514 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19926559..19930514 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtcgtcctcgtcgtcggcgtcgtcggcggcggcggccgcgtttcggccggctgttgtgcagcgggagcagcaggtggtggaggagaaattccccgcggcggcggcggcgatgcgggagatggtcctcccgccggtggcggcggcggcggcggactccgagcaggagcagctctgctacgtgcactgccactactgcgacaccgtgctcgtcgtcagtgatctcagatcaaaccacgcacacttcctttccatttgtgttcatcttgctctcgactctcgagcttttcttgttcatccatggcggcgtgtgttgcaggtgagcgtgccgagcagcagcctgttcgagacggtgacggtgaggtgcggccactgcagcagcctcctcaccgtcaacatgaggggcctcctcctcccgaccaccgccgccgccgcgccaccaccacctcctcccccgccgccgccgccgccgccgccggccgcgcacttcccccactcgctcaacctcgcgccggccaaccctccccaccaccactccctcctggatgagatatcgacggcgaactccccgacgcagctgctgctggagcagcacggcctcggcggcctcatggcgagcgcggcaagctgcaggaacaacaactccccggcggcggcggcggctccgccgccgccaacgtcgcaggggaaagcggcggcgaaagagccgtcgccccggacgaacaccgccgtcatcaacagacctccggagaagaggcagcgtgtgccatcggcgtacaaccgcttcatcaaggacgaaatccaacgcatcaaggctggcaatcccgacatctcgcacagggaggccttcagcgcggctgccaagaactgggcacactttccgcacatccactttggactgatgccggatcaccaggggctcaagaagaccagcctgcttcctcaggatcatcagagaaaggatgggctactaaaggaagggctttatgcagcggcagctgctgctgcggcggcggccaacatgggtgttgcaccgtactaa</cdnaseq>

Protein Sequence

<aaseq>MSSSSSSSASSAAAAAFRPAVVQREQQVVEEKFPAAAAAMREMV LPPVAAAAADSEQEQLCYVHCHYCDTVLVVSDLRSNHAHFLSICVHLALDSRAFLVHP WRRVLQVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPPPPPPPPPP PAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGLMASAASCRNNNSP AAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIKDEIQRIKAGN PDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQDHQRKDGLLKEGLYAAA AAAAAAANMGVAPY</aaseq>

Gene Sequence

<dnaseqindica>3861..3956#2384..2461#2043..2118#1389..1437#655..853#1..549#atgtcgtcgtcgtcctcgtcgtcggcgtcgtcggcggcggcggccgcgtttcggccggctgttgtgcagcgggagcagcaggtggtggaggagaaattccccgcggcggcggcggcgatgcgggagatggtcctcccgccggtggcggcggcggcggcggactccgagcaggagcagctctgctacgtgcactgccactactgcgacaccgtgctcgtcgtcagtgatctcagatcaaaccacgcacacttcctttccatttgtgttcatcttgctctcgactctcgagcttttcttgttcatccatggcggcgtgtgttgcaggtgagcgtgccgagcagcagcctgttcgagacggtgacggtgaggtgcggccactgcagcagcctcctcaccgtcaacatgaggggcctcctcctcccgaccaccgccgccgccgcgccaccaccacctcctcccccgccgccgccgccgccgccgccggccgcgcacttcccccactcgctcaacctcgcgccggccaaccctccccaccaccactccctcctggtattacctacctagctagctagcttgcatgcatcaatggctgcttcttctgcatgaagatcaagattgagtcatcctgtgtggttgcgttgcgtgtgcatgcaggatgagatatcgacggcgaactccccgacgcagctgctgctggagcagcacggcctcggcggcctcatggcgagcgcggcaagctgcaggaacaacaactccccggcggcggcggcggctccgccgccgccaacgtcgcaggggaaagcggcggcgaaagagccgtcgccccggacgaacaccgccgtcatcaacagacgtgagtatgctaacttacatgcaaagttgcttagctcccttgagatgtcaacatctcgagaaaaaagccagctgaaaattaaatcgagatgaaactttttcttggttcttgatcaaaatttggagagtttaaaatccactctctctctcttttgtggcaataagtgctccatggccaccacgctgcacgctctcaactgtccaagggagaagaagagagagctagctagcactcgtgtagtcgcgtctagtcgtcgtcttcctttgtgcactcgagctagcttagctagctaggcccttttcactgtgggcaacagtggccgttctcctcctccattgtcgcctgtctccacacttccatgcgagctagcttgctagctagccttgttgattactagtactagccatggccggctggtcgagctcagctccagccatggcgtgcagcgtgttcatctagtttagagctagctaattaactgatgcatcagcttaattcattttggttaattgtctgaaactctgaatgcatgcagctccggagaagaggcagcgtgtgccatcggcgtacaaccgcttcatcaagtgagttactaacaatcacatttcttctgaatcacaatcctattactttgagctcctcattccatcctaaaatgtagtagtaaattttatatggatggaacacatatgtatcatgtccatccaaaatctcttatatcttgagacggaagaagtattactagttctcggcaatgccggccgcctcggtggaagcagccggccaacttgggccccgacgccgtggcggcagtagtgagcataaggccttttgcagagggaggcagagatcgatagagagagaggaagaagggttctttgctttgtgactttgtcttttccctctctctctctctctctctctctcacttctctctctccatgtttgcatctttcgaggcaagagaggaaatgagagagagagtggtcacagtggagttaatgagacgacatggcaaatgatgcattggtgatgagagagagagaggagtgaatacctccattgattgacgatcgatgtcgtcgtcggttgagctgatgtttgcctttcgttttctttatactttctcgatctttttgcttgactggtctttgttttctttcttgtttttgttcttggatttttgcagggacgaaatccaacgcatcaaggctggcaatcccgacatctcgcacagggaggccttcagcgcggctgccaagaacgtcagtactctctcgccatggctccatccacacctagatctttctctttctttctctctctctctctctctctctctctctctctctctctctctctctctgtgtgtctctggtctgatctgttgttatagggtttggcagtgttgccatgtttctctcctagggtttcccgatctttcaaaatcgagttcctggtgtttggcattgtctgaatctttgtttgcctgtttggtgtggtggttttgttgttgttgtttgtttgcagtgggcacactttccgcacatccactttggactgatgccggatcaccaggggctcaagaagaccagcctgcttcctcaggtgaccaatcaatgaaaccttgtcccaaatactagctactgcttgtgaagagacaaactcacattttttgttcatattcctgtacaagtttttcacctctgaaatttgaagtctcatgggacaaaagagtaatatgtgacagtaaaactgaagctttgtttatttttgaggaatatatagcagaatcatccaaagtcctatttggcacaactactgcatcggattccagtacaggttaaaagactgcagaagttatgccaaccaatagcactaatgcacggctgcgccaaacttattcttcttcttaaagagagctgtggccctgtttagatgggactaaaacttttaagtccctatcacatcggatgtttgaaaattaattataaatattaaacgtagattattaataaaacccatccataatcttggactaatttgcgagacgaatctaatgagcctaattaatccatgattagcctatgtgatgctacagtaaacattctctaattatagattaattaggcttaaaaaatttgtctcgtgaattagcttttatttatgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaagacagggactaaagttaagtccctggatgtaaacaccaccttattcttcttcttaatgagtattttattaagaacataggaagttttgcctctcaaggaaacgttccctcattttttatgtcacctaaaagtcatcatttttctaaaacaaaacttgacaagttagatcaatatatatgtgatatattaattactcgcaaacatatgcaagttccaattcaacttatacaaattgaaacaaaaataataaataattatcaataatgcacagtattcagagttatatttgggtttttttttaacttttgttgttgaatttgaacttatggagtgataggtttaagtgttactccctccgtcccaaaatataagcattttagcatagtgacaaatcaaatatttttaactttaaaattttaatagaaaaaataaaaaaataatcatgtaaaattgatgttactacatttatcaataagcaaactatcataatatgcaattctttttgtttaaaacatcttacttttatagatattgttgatcaaagtagcatcttgtagatcgtgtcagggtataaaaatgcttatattttagatggagggagtaattattttatcattttcctttcttaaatttaaacttatggaatggcgggcataaaacggggaaaaacacatcctaattaattaattttcacaatctagccaaaagcattcttgtgagtgtgaattaatgaaggagggtaattatgttactaatcaaatgtcaaccttgtttatttgtcctataggatcatcagagaaaggatgggctactaaaggaagggctttatgcagcggcagctgctgctgcggcggcggccaacatgggtgttgcaccgtactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0508300, RefSeq:Os10g0508300