Os01g0764400

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Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0764400| Description = Similar to Chorismate mutase, chloroplast precursor (EC 5.4.99.5) (CM-1)| Version = NM_001050876.1 GI:115440122 GeneI...")
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Gene Name

Os01g0764400

Description

Similar to Chorismate mutase, chloroplast precursor (EC 5.4.99.5) (CM-1)

Version

NM_001050876.1 GI:115440122 GeneID:4326889

Length

3037 bp

Definition

Oryza sativa Japonica Group Os01g0764400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33927680..33930716

Sequence Coding Region

33927898..33928134,33928279..33928371,33928663..33928806,33929273..33929359,33929446..33929665
,33930467..33930627

Expression

GEO Profiles:Os01g0764400

Genome Context

<gbrowseImage1> name=NC_008394:33927680..33930716 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33927680..33930716 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcaacaaggtggtctccagctacagggccgcctcgcccgcgcccgtggggatggcccgcgggggaggagggccggccagccgcgtggagttcgtcccgtcgtcgcggcgggcgcggctcgcggccaccaacaactccgtcacccccgtgaccaaggaggagaaacagaggatagatcaaagtgaaatactgaccttggacaacattagaacctccttggttaggcaagaagacagcatcatattcagcctcttagagagagcacagttttgctacaatgctgatatatatgataaaaatgctttccatgtggatggatttgatggctctttggttgaattcatggttagagaaaccgaaaaactacatcaacaggttgggagatacaagagccctgatgagcacccattctttccggaggatctgcctgaaccactgttgccacctctccagtatccaaaggttttgcatcctattgctgattctattaatatcaacaaggagatttggaaaatgtattttgatgagcttcttccaagattagtgaaagaaggaagtgatggtaattatggatccagtgctctttgtgacacgatctgcttgcaggcgctctccaaaagaattcactatggtaagtttgtggcagaggctaagtttcaagagtctcctgaagcttacatgcctgcgataatagcacaggactgcgatcaactaatgcacctcctcacctatgaaacggtggagcgtgctattgaacatagggtggaagctaaggctaagatctttggacaggaggtggatttaggcgctgaagacaacggcgctccaccaatgtacaagataaggcccagtttggtggctgaactgtacagctacaggatcatgccgctaaccaaggaggttcaagtagcctacttgctgaggagattggattga</cdnaseq>

Protein Sequence

<aaseq>MEFNKVVSSYRAASPAPVGMARGGGGPASRVEFVPSSRRARLAA TNNSVTPVTKEEKQRIDQSEILTLDNIRTSLVRQEDSIIFSLLERAQFCYNADIYDKN AFHVDGFDGSLVEFMVRETEKLHQQVGRYKSPDEHPFFPEDLPEPLLPPLQYPKVLHP IADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQALSKRIHYGKFVAE AKFQESPEAYMPAIIAQDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNG APPMYKIRPSLVAELYSYRIMPLTKEVQVAYLLRRLD</aaseq>

Gene Sequence

<dnaseqindica>2583..2819#2346..2438#1911..2054#1358..1444#1052..1271#90..250#atttcccccacgcctacccacccctccctccctcccgacgacgtccaccctaccaaccccggattccattgcgcgcgagcgtgcgagctatggagttcaacaaggtggtctccagctacagggccgcctcgcccgcgcccgtggggatggcccgcgggggaggagggccggccagccgcgtggagttcgtcccgtcgtcgcggcgggcgcggctcgcggccaccaacaactccgtcacccccgtgaccaagtatgaaactcttctctagtcccccccccccccccctgctcgcgaggtctccttatgcctgcccggtcttggaatgaatcggatgcgtgattctctgtttggcgttggtggtgtagtagcatatagcatcttcgtctgtgcgatttgtgcattagtgctttgcgaatcgagaccgggttagcgttatgctttaattgatggattcatgaatcgtatactatccgattcgaggtggtctctggttcggaagaaaaatgaggaatggtttgatgtcgagttgatggttgagaattggtctcctagttgggaaatattttctctcaaatgatttcttaacaacatggagttgattgtgctaatgattgtgcttgccagctttgacttaaagccatactgtagttttgagttttgattagttgaatccatattatggttttaatcattgtgtgatgccaaggatgcttaaacatgtaaatttcatgcaaggtattttgccatttcgaccaaaaatcgtgggcagctggtgacttgaccaaagtctttgtgtagaaaactcaacaaagggtgaattatttttcttgtacgactgctgtagtatcaatccctgaatcgcagcaaaactttctagataaacatgtgcaccttttaaaagggaattgacttggaaaccaaagaactttttttttctttgcaagggacaaataacatattgataacctggttaagtcattatggcactcctacaaaacctttttgtgttacatcaaagaaattaatacttttctcttgtactttttgcagggaggagaaacagaggatagatcaaagtgaaatactgaccttggacaacattagaacctccttggttaggcaagaagacagcatcatattcagcctcttagagagagcacagttttgctacaatgctgatatatatgataaaaatgctttccatgtggatggatttgatggctctttggttgaattcatggttagagaaaccgaaaaactacatcaacaggtagagcagggttgtaactagcaatataattgttcattgtatgccaaaaattgcaaaatgttgatggttctggccatcttgtgtaggttgggagatacaagagccctgatgagcacccattctttccggaggatctgcctgaaccactgttgccacctctccagtatccaaaggtaatgcataaactcgtgttcttagacatctagttcttctctgtaggctttcagcattccttttgttagtataggcaaacatagtccttcattgactaatcactaatatatcaggttttattatttgggtttatgcttgcctctctctccctatctctctctctgaactgacagtagatgaattggttatgcatcttatgtattcgtagatgttgaattcttctgtgtgggcttgcgtagcttcttttgtcagtgaaggcaagcatgtacctttgttgactgaccactagtatatcggttctgtggtgggatatcgtgcttactgtccacctgcaacataatacaacttttgatacgaagtggagtaccatctattgagactcacattgctaattgattactgtgctgttgtattgttataagtaaatttggataaaattcatatttttgttcttgtcttttctaggttttgcatcctattgctgattctattaatatcaacaaggagatttggaaaatgtattttgatgagcttcttccaagattagtgaaagaaggaagtgatggtaattatggatccagtgctctttgtgacacgatctgcttgcaggtactacagttagtataccaaatgttctaataatctggcctcgtactgcttctggctactgtgctgtagctttcatttgctcaaaataatttagcattagcaaaataattcttgtaaaaccatttcttgttgtagtattgcttcaagatgttctgctgccagaattttcaccagatgtcattttcatagtattagtactatactgttgttcactggtgactcgtgcaattaggcatttttatattgggaaattatgctcacctgttcttgttttcctgttctatcatccaggcgctctccaaaagaattcactatggtaagtttgtggcagaggctaagtttcaagagtctcctgaagcttacatgcctgcgataatagcacaggtttgtgttctgttttgctgtataatctgtctttatcatgggaagcaaataaattccatgtgttttcttgtacattactttaggtacatatcaaagttgagtctattatgcaagcggctaattatttttatctgggaatttcaggactgcgatcaactaatgcacctcctcacctatgaaacggtggagcgtgctattgaacatagggtggaagctaaggctaagatctttggacaggaggtggatttaggcgctgaagacaacggcgctccaccaatgtacaagataaggcccagtttggtggctgaactgtacagctacaggatcatgccgctaaccaaggaggttcaagtagcctacttgctgaggagattggattgattgtttacgattgtaaactgccagcttcggtttcctggcatcaaagaataaattaggggaaagacaaccataggtatccattttgggacaactgaaagaaaatattttattcgggtttacactatattttgtggcaagaacaagcagaagcaggatatcacatgaaatgatatggagatgttgcatataatataatagatttataccatcttttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0764400, RefSeq:Os01g0764400