Os01g0765000

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Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0765000| Description = Similar to Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)| Version = NM_001050882.1 GI:115440134 GeneID:432...")
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Gene Name

Os01g0765000

Description

Similar to Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)

Version

NM_001050882.1 GI:115440134 GeneID:4326895

Length

5795 bp

Definition

Oryza sativa Japonica Group Os01g0765000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33989032..33994826

Sequence Coding Region

33989249..33989347,33989425..33989526,33989826..33989879,33989971..33990034,33992648..33992685
,33992886..33992944,33993747..33993786,33994393..33994468,33994573..33994787

Expression

GEO Profiles:Os01g0765000

Genome Context

<gbrowseImage1> name=NC_008394:33989032..33994826 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33989032..33994826 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcggcgagggacctcgccgtagcgtccatctccgccgccgtgggcgccgcagccgccgcggccgcgctgcgcttcctgtcatcctacggggccagctctgccaagcagcggagcccgcccacgccgtgcgccgagcacctcgcggtcaacggatgcgccgccgagcgcccgccggtgcagtcccccttcgatcccgccaagagggaagggtatatctcctgggacgactacttcatggcgatcgcgttcctttcggccaagcggtccaaggatcctaatcggcaggttggagcatgcttggttagccaagaggggataatcctaggaatagggtataatggatttcctagaggttgttctgacaataagctaccctgggcaaagaaatctgccaagggagatccattggagacaaaatacccctatgttgttcatgctgaggttaatgctattttaaatacaaaccatgcttcagcggctggacagaaattatatgttaccatgttcccctgcaatgagtgtgctaagattattatccagtcaggtgtatctgaagtcatatattttgtagagaaaaggattgacaactctgattatgtttacgtagcctcgcacaagttgttatcaatggctggtgtaaaggttaggaaacaccaaccacagatgtcacaaataccaatcaagtttcaggagcctcgaaacggtgagccttcaatgaacgcagcaagtatatttagctga</cdnaseq>

Protein Sequence

<aaseq>MASARDLAVASISAAVGAAAAAAALRFLSSYGASSAKQRSPPTP CAEHLAVNGCAAERPPVQSPFDPAKREGYISWDDYFMAIAFLSAKRSKDPNRQVGACL VSQEGIILGIGYNGFPRGCSDNKLPWAKKSAKGDPLETKYPYVVHAEVNAILNTNHAS AAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRIDNSDYVYVASHKLLSMAGVKVR KHQPQMSQIPIKFQEPRNGEPSMNAASIFS</aaseq>

Gene Sequence

<dnaseqindica>5480..5578#5301..5402#4948..5001#4793..4856#2142..2179#1883..1941#1041..1080#359..434#40..254#agtctccctccggacccaagccccgctcgagcgagcgcgatggcctcggcgagggacctcgccgtagcgtccatctccgccgccgtgggcgccgcagccgccgcggccgcgctgcgcttcctgtcatcctacggggccagctctgccaagcagcggagcccgcccacgccgtgcgccgagcacctcgcggtcaacggatgcgccgccgagcgcccgccggtgcagtcccccttcgatcccgccaagagggaagggttagtcctagtcgccccaccggctcaccctctttgattaggtgtagccgagttaaagctcgtttttggcatcttgtgaggatttgttgcgttcgtttctgcaggtatatctcctgggacgactacttcatggcgatcgcgttcctttcggccaagcggtccaaggatcctaatcggcaggtaaagtgcatcttcgttgcttgctaaactgcccgtgtaaggattccaacgaacgattgtcgacgtttaacgtgtttgagctcatgcagtcatactgtttgtagaaatgcctcaatgatactatactgtggagaatcattaaaattgtcggagagcagtggactgttgtggttgatgatttttttcgggatgatgctaccctttattatcctactttagaagaattcacctacctatttggacttgactttctttcaatcttttttagacaataaggcatgactttctttcaaccttttgccaaccatacataccagagtggcaaattttacccctgggtaggatcatttggcaatacaactataccaaaatgtcaagtagtaatgcttcatttcatctcaagtttgttcacgtatatctttcttgctcgttttgcaaatgtcatgtaatggaagaggaaggataacatttgttttgaatgtatttgtttgttgttgtcataaagcaaactttaactcaattaagcagctcgtgcatgcttgattagttcattatttcacctatttcattaatgatttaatcaattcatcagtatgttgtatgcaggttggagcatgcttggttagccaagaggggataatcctaggtaaagttgaaactcaaagaataccttgttcagggttgaaattttatagcctttttgcattttagtaggttagctgcttatttaaaaacaaaaacacacaaggttaatccatgtaaccattggacactgtacacatttttatgctatatctgaaactgatttttcataaactagaagcattatggtcacaaatcaaatttgatatgcttttcactcttaggaagtgcactgaactgccttattatatccttttcttgtttgttgttctctccattagaccacatgattggccagtgcagtactgttttgtgtactgagatagtgctgtgctagtgtgtgcaacggacttcttctcgtgttacctgcctaccccagtgtcgatatattattttgtataaattccattttgttactgctttattgaggggcatttgttactggttagatacactattgatatccctatccagttgtggcataatggcatgacatttcagtcttacatttttggctcttcacagcaaatcacaaccagcatggcagtcctctttttaattacatgtttgcttttggactcgctgctacatttcagtttttttttttggtaacattgatccagctatattggtttttcaacacatgctacttttttttttgaaacatataataatgcacccttttatttggtggcttcagactgcagcattgctgtgaaatgtatgttgttttggcaggcaatgcaccattaataatatgtatatcatgttgttctgatagtgtaacccaatcttaatgcaatcaggaatagggtataatggatttcctagaggttgttctgacaataagctaccctgggcaaaggtatattttttctgaagctcttttttcgtatgtaacaaggactactaaattaattattgtactgttagtgcaaagtcaaaattcatgtaaggtgctcattttgtaattatttagcacatacaagctgccacatgcaaaagagtcccatagcttaacatctatcacttctctagtattttcctaattgcttgtcatttcagaaatctgccaagggagatccattggagacaaaatacccgtaagtcatgaatttattttctacactagtttgattagcactatcccttttctttgtgaacatgcaaaaggattgtgggccaaatatattaaaggaaacatgagcaaatacaacaaaacgtcaatattctagcaacaaggaggaaatgccttgggctgtgtacacctttctaaggtgtagaggccgggttaataatccattatctaaaaaacaaggaggaaatgcctatagactattaacacgataagcaccacctgggaagcatgaaagagcaactggttggaaacatcagtggagagacattgacagtatcttttattgatacactgtagctctataggctttttgggatcagtacgggcaatttactttagcagtgatgagataattgttttgtaaatatggatatcctagatataaccatgagctctagttctaaatgtacataatcacttggtgccacctatttggaatgcagaagcttaaactatgtggtagatcattgacaaggatctttcttcaaaataaacagttaatgcaaatgccttttatttcctactccctccgtcccataatataagggattttgagtttttgcttgtaatgtttgaccactcgtcttattcaatttttttttaaaattattatttattttatttgtgacttactttattatctatagtactttaagcacaactttttgttttttatatttgcaaaaaaaaattgaataagacgaatggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacggagggagtatttgatttcataatctagagaggagaaaaccttaaactgttgggtggtgtatgtgctgagctgatgatttgcgtcccagcccaaaagtctcgcatacaccagctgacttcacaaaccatatagagtaagagtgatgatatgttcaaagaatgaagagcataactgaatgcaaaaaaggaagggcggcgtggatgggatcctgtgtgttgactgttaataactcggggaaaaaagttcccagagacatgcacatggcgatttttttttattttcagctatcttgtgacctgtgaggcacaaaaaatctaaagggattagtctacaactctatatgtgacccttaaaaattatctaaagggattagtctacaactctatatatggcccttaaaaatttacttctatgctcctgtgtcaggctcatatctactgatccttgttgttctagactttaagattttttactatccttgaggttatgcagtacggccgttgatctggcaacaccctacggtcaaaaatcgtcggtacctcatggtaccgcaccttcccattgaagcggtactgtggatgggagggcagttttgtactttcgtctttattccgcgtcacgcacgcacgcggcatctcttcctcctccgtctctgcatctcacagggcaggagcagcgttgaactaaccggcggcgagagatggcggcgggagcaggggcatataggtcccgaaccctagatcggaaacccgacagcggcccagatcggcgatgggtggcgggaggaccgggatagctgcaagctgcgtcgggagcttgatgatggttgcggcgacgattcatcggcgacgacggccgcggcgatggttgcggcggtgatttgtcggaagctcgatgtgacggtggccgcggcgaacttgatgcgacgccggcacggggatgcggcaaagagaagagaggggaagagggtaaggccggcgatggttgcaacggccattcatcgggagcttgacgatggttacggcggcgattcgtcggaagctcgacgcgatggctgccgcagcggactcgatgcgacgcggcggcggccgcggcggactcgatgcgatgcaacggcggcagcagcggactcgatgcgacgcgacggtggccgcggcggactcgatgcgacgtgacggcggcagcggcggactcgatgcgacgcgacggcggcagcggcggactcgctggcacggagatgtggcaaagctttggagaatacgagagattcattcattcatggcacgtcgccgacgagtatcttgtcgccctcgtcgtcacgagcgtgtactcgccggacgccgctgccgctgtcgaggagcccggcaatcgcctcctcgcctcctcccgtgcagctcttgccgccggcggcggcggacatggttgggtccctttgagccaccacgagcaagcaagcaaaacgccatcaagagggtgagggattagcgccaccctaaatttgtttagcccgatcatacccctcctaaatcaacggttagattaaattggtacctcatggtacctcgtacctcatagtacctcgtatctcatggtacctcgtagtacctcctcaaggatgggaaagatgctcttagactttagttagcttgtacccaatccagttgcgtaaaatttgtgtgagaagccctggtgttaattcctctaagctttacactgtgctacactacatatgcattccttgaatacaaaaatagtctcctatagcaaggcttagatgttgaattctaagtccctaattgtgaccgtcatctttcaccctgacagctatgttgttcatgctgaggttaatgctattttaaatacaaaccatgcttcagcggctggacaggtttggacttctaatctcctacaaacttaaagcatctcattaatttgcctttataagctaagaataatcttgtgttatcttctctttgcagaaattatatgttaccatgttcccctgcaatgagtgtgctaagattattatccaggtttgtttctggatagaatcagtatcttaaagttaaaatgtatttttgtcatcacctatttaaattactctcactttgaggaaatgcattataacaccatatatctcaatcatacacttcataaaacctaacggcacattttagcttaaaagtttcatatttactgcatgctttgccggttaaactttagttaatgtatacaaacacattgcattttattaataatttactagtaaaccgcgccttttcacttgaagaaattggttcaacactaactataatacttatctttcttgcagtcaggtgtatctgaagtcatatattttgtagagaaaaggattgacaactctgattatgtttacgtagcctcgcacaagttgttatcaatggctggtgtaaaggtttgtaggattgacctatatgaatatggttatactgtgttggaatgagttacatacgttcttatgcttcatggcaggttaggaaacaccaaccacagatgtcacaaataccaatcaagtttcaggagcctcgaaacggtgagccttcaatgaacgcagcaagtatatttagctgatcttatctttgtttgttgtctccttatctacatatacctttactgtgcggttatgtgtaagatttctgttgatcatggcatcaaagaacaaatgcttgtcagtcattcaacgtcatcgattgccatatcctccggggtgctgttgaccgtcttgttgtaaacttgtaatccgtgagactactagatcatcaaaacaaattatggctgtgtttagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0765000, RefSeq:Os01g0765000