Os01g0767900

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Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0767900| Description = Similar to Ankyrin repeat BTB/POZ domain-containing protein| Version = NM_001050898.1 GI:115440166 GeneID:4325503| L...")
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Gene Name

Os01g0767900

Description

Similar to Ankyrin repeat BTB/POZ domain-containing protein

Version

NM_001050898.1 GI:115440166 GeneID:4325503

Length

3908 bp

Definition

Oryza sativa Japonica Group Os01g0767900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34123582..34127489

Sequence Coding Region

34124065..34124766,34125307..34126057,34126259..34126453,34126941..34127200

Expression

GEO Profiles:Os01g0767900

Genome Context

<gbrowseImage1> name=NC_008394:34123582..34127489 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34123582..34127489 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggcgcgtagcgcggtggtggtaatagccatggagccctcgtcgtccatcaccatcgcgtcgtcgtcctcgtacctctcgaacgggtctagcccgtgctcggtctctcttgcgccgccgggggcaggggcggtggcggcgcaggcggcgccggttgccgccggggagggcggcggcggcggaggaggaggaggaggaggagggagtagtagcgtggaggtggtgagcctgaatcggcttagcgctaacctcgagcggctcctcctcgattccgacctcgactgcagcgacgccgacgtcgacgtggccgacggtggcccgcccgtgccagtccaccgctgcatcctcgccgcccgcagcaccttcttctacaacctcttcgcggcgcgcggccgcggcggcgatggggctgccggcggcggcggcggcggcggtggtgggggaggggagaggactggggggaggccgcggtacaagatggaggagctcgtgccgggaggccgcgtggggcgcgatgccttcctgtcgctgctgggttacctgtacacgggcaagctccggccggcgccggatgacgtggtgtcctgcgccgaccccatgtgcccgcacgactcgtgcccgccggcgatcaggttcaacgtcgagcaaatgtacgcggcgtgggcgttcaagatcaccgagctcatctcgctgttccagcgacggcttcttaacttcgtcgataagactctagtagaagatgttcttccaattctgcaagttgcttttcattcagagctgactccagtgcttgaaaaatgtattcggagaattgcaagatcaaatcttgataatgtatcgttggataaggaacttcctccagaagttgctgttcagataaaagagattcgccaaaaatctcagccaaatgagggtgacaccgtcatttcagaccctgtacatgagaaaagggtcagaagaatccacagggcactggattctgatgatgttgagcttgtgaagttgcttcttaacgaatctgagatcaccttggatgatgccaatgcattgcactatgctgctgcttactgtgattcgaaagttgtttcggagttgttagacttgagacttgccaacttgaatttgaagaattcgcgtggatacacggcactccatctggctgctatgaggagagagccagctattatcatgtgtctcctaaacaaaggagcagctgtatcacaattgactgctgatggccagagtgcaatgagtatctgccggaggttaacaaggatgaaagactacaatacaaagatggagcaaggccaagagtcaaacaaagacagattatgtattgatatattagatagggagatgataaggaaacctatggcagtggaagattctgtcacctcgcctttgttggctgacgatcttcacatgaagcttctctaccttgaaaacagagttgcatttgcaagattattttttcctgcagaagcaaaggttgcaatgcaaattgcacaagcagacaccacaccagaatttggcattgttcctgcagctagcacttctggaaaattgaaggaagtcgatctgaacgagacaccagtaacacaaaacaaaaggctccgttcaagggtggatgcactcatgaaaacagttgagctgggacgtcgctacttccctaactgctcgcaggtgctcgacaaatttctggaggatgatttgcccgatagtcctgatgcactcgacctccaaaatggcacttctgatgagcaaaatgttaaaaggatgcggttctgtgagttaaaggaggatgtgcgcaaggcattcagcaaagacagagctgataatagcatgttttctatcttgtcatcttcatcgtcatcttcgccacctcccaaggttgcaaagaaatga</cdnaseq>

Protein Sequence

<aaseq>MPARSAVVVIAMEPSSSITIASSSSYLSNGSSPCSVSLAPPGAG AVAAQAAPVAAGEGGGGGGGGGGGGSSSVEVVSLNRLSANLERLLLDSDLDCSDADVD VADGGPPVPVHRCILAARSTFFYNLFAARGRGGDGAAGGGGGGGGGGGERTGGRPRYK MEELVPGGRVGRDAFLSLLGYLYTGKLRPAPDDVVSCADPMCPHDSCPPAIRFNVEQM YAAWAFKITELISLFQRRLLNFVDKTLVEDVLPILQVAFHSELTPVLEKCIRRIARSN LDNVSLDKELPPEVAVQIKEIRQKSQPNEGDTVISDPVHEKRVRRIHRALDSDDVELV KLLLNESEITLDDANALHYAAAYCDSKVVSELLDLRLANLNLKNSRGYTALHLAAMRR EPAIIMCLLNKGAAVSQLTADGQSAMSICRRLTRMKDYNTKMEQGQESNKDRLCIDIL DREMIRKPMAVEDSVTSPLLADDLHMKLLYLENRVAFARLFFPAEAKVAMQIAQADTT PEFGIVPAASTSGKLKEVDLNETPVTQNKRLRSRVDALMKTVELGRRYFPNCSQVLDK FLEDDLPDSPDALDLQNGTSDEQNVKRMRFCELKEDVRKAFSKDRADNSMFSILSSSS SSSPPPKVAKK</aaseq>

Gene Sequence

<dnaseqindica>484..1185#1726..2476#2678..2872#3360..3619#ccccccttcgtcctcgtcgtcttcctcccatttttttttcctcctcctcctcctctcatccctcgccgcgagccaaagcccctggtttcctcgcaactgcctccccgcgattccgtttgacccccactgttcttctcccctaccaccaccaggtcgcagtcgcttccaatttccaaataattccctccactccggccgctcgcgaggaaagaaaaggatttctttttctctctctctctctctccccctctctccgagatccgtttcccaaacaggcggggggtcgaaagtgtttggtactttggtttggggagcttgtttgccgacgcggatctgcgtggagacgagcagaggggggagcgccggaattgggtggtttggcccgggaggcgccggaaagtgggggagcctttggattccccgaacccgccatggtgatccggcacgagtagtagtggtggtggtggtattagtagcagtgagatgccggcgcgtagcgcggtggtggtaatagccatggagccctcgtcgtccatcaccatcgcgtcgtcgtcctcgtacctctcgaacgggtctagcccgtgctcggtctctcttgcgccgccgggggcaggggcggtggcggcgcaggcggcgccggttgccgccggggagggcggcggcggcggaggaggaggaggaggaggagggagtagtagcgtggaggtggtgagcctgaatcggcttagcgctaacctcgagcggctcctcctcgattccgacctcgactgcagcgacgccgacgtcgacgtggccgacggtggcccgcccgtgccagtccaccgctgcatcctcgccgcccgcagcaccttcttctacaacctcttcgcggcgcgcggccgcggcggcgatggggctgccggcggcggcggcggcggcggtggtgggggaggggagaggactggggggaggccgcggtacaagatggaggagctcgtgccgggaggccgcgtggggcgcgatgccttcctgtcgctgctgggttacctgtacacgggcaagctccggccggcgccggatgacgtggtgtcctgcgccgaccccatgtgcccgcacgactcgtgcccgccggcgatcaggttcaacgtcgagcaaatgtacgcggcgtgggcgttcaagatcaccgagctcatctcgctgttccaggtgagatacaaaaggatgctcttcttgtgcttgttaggataccaaaaacggtagctgcagaactagaaactgttctgtcaccgattatatttttatgcaatctgtatttgatggtgtaaacatattttcaaccaatttttgcatgcgaataacttcaagctgcacgatgtcttgagtctggattctggaagtcgttcaagcacataggctgtgttacataagcttgatagcttgtaaacattgctctcaagtccccacttcagatcttctaactagattgtgttataccttttttaagttgaaagaaacttgctaaatctatattgggttcgattagaggagctaggatgcagtcctggtcctggtgatgtgtatcagtgtgctccagattggttagtggactaattagcttggttgtctcagcttatatagttcaacggtttatgaatccactacatgtccaataacccaaagtcttttagcttatatttttatgacctgttgtttaatctgggttaatacggtcttcttctaccacagcgacggcttcttaacttcgtcgataagactctagtagaagatgttcttccaattctgcaagttgcttttcattcagagctgactccagtgcttgaaaaatgtattcggagaattgcaagatcaaatcttgataatgtatcgttggataaggaacttcctccagaagttgctgttcagataaaagagattcgccaaaaatctcagccaaatgagggtgacaccgtcatttcagaccctgtacatgagaaaagggtcagaagaatccacagggcactggattctgatgatgttgagcttgtgaagttgcttcttaacgaatctgagatcaccttggatgatgccaatgcattgcactatgctgctgcttactgtgattcgaaagttgtttcggagttgttagacttgagacttgccaacttgaatttgaagaattcgcgtggatacacggcactccatctggctgctatgaggagagagccagctattatcatgtgtctcctaaacaaaggagcagctgtatcacaattgactgctgatggccagagtgcaatgagtatctgccggaggttaacaaggatgaaagactacaatacaaagatggagcaaggccaagagtcaaacaaagacagattatgtattgatatattagatagggagatgataaggaaacctatggcagtggaagattctgtcacctcgcctttgttggctgacgatcttcacatgaagcttctctaccttgaaaacagaggtgaagtctcttttcatgctcggtagaatagcacttcgtggtgcagcttgtttcagacctttctcgaacagaaacaggatggagaaaaattatacatttatgctacataaacaagtgatcctagcatttaccacgtttgctttcaaccatactacattcacctggagaatccatgctgacacattgcattttctcttgcagttgcatttgcaagattattttttcctgcagaagcaaaggttgcaatgcaaattgcacaagcagacaccacaccagaatttggcattgttcctgcagctagcacttctggaaaattgaaggaagtcgatctgaacgagacaccagtaacacaaaacaaaaggctccgttcaagggtggatgcactcatgaaaacaggtcggaactgatgacacattctttatatgcaaactattatagcttatgagtagatgtcactgattaccatcagaaattctcacatgttgctaataccttcatcttcgtactttaaatgtttgagttggtggtgttgataccgtggtagttcaaaatccccatttcttccaccatctctcactaaaaaaatcaccccagcacgcacgttgctagttcccggctaaaattttaactgctaatggaacacggaaaataattatttagttgtcaaatgttatgtgaggatgttgtagttcatgttaaaaacattcctgtctcttgtaaaactggcgtgatttccacattttgcatactttgaacctaatgagcacaaatagttggggtttttatttactcaaatgttgattggtaatttgttttactctcagcaccctttcctcagaacttgatgatcattcttatgatattttttttcttctgttttcagttgagctgggacgtcgctacttccctaactgctcgcaggtgctcgacaaatttctggaggatgatttgcccgatagtcctgatgcactcgacctccaaaatggcacttctgatgagcaaaatgttaaaaggatgcggttctgtgagttaaaggaggatgtgcgcaaggcattcagcaaagacagagctgataatagcatgttttctatcttgtcatcttcatcgtcatcttcgccacctcccaaggttgcaaagaaatgacagaagttttgtaacaaatttccgctcgtgatgttactgggacaagagatatcgatcaatagacctgtatagtcttacagtggtataacaattagatatcgaagcttcttcgaatattagaaagtgctgttctgggctgcactcagctggtttatgggacccatgcggtgaaactggcaaaagaaaaccagctgattagaggctccaaagcagtgtctctcgtgaatatgtttgtagcattctgttttgttcaggatggctataatgataaaatcttttcaatagatat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0767900, RefSeq:Os01g0767900