Os01g0768400

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Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0768400| Description = Conserved hypothetical protein| Version = NM_001050901.2 GI:297597676 GeneID:4325506| Length = 6658 bp| Definition ...")
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Gene Name

Os01g0768400

Description

Conserved hypothetical protein

Version

NM_001050901.2 GI:297597676 GeneID:4325506

Length

6658 bp

Definition

Oryza sativa Japonica Group Os01g0768400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34151479..34158136

Sequence Coding Region

34151479..34151583,34151665..34151822,34152631..34152829,34152922..34153041,34153570..34153656
,34153737..34153805,34154036..34154098,34154236..34154577,34154716..34154757
,34154833..34154925,34155045..34155248,34155498..34155742,34155837..34156007
,34158115..34158136

Expression

GEO Profiles:Os01g0768400

Genome Context

<gbrowseImage1> name=NC_008394:34151479..34158136 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34151479..34158136 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgttcgatgaaaagcaccggcaaaatggctagaaagaaaaggttgaacatagtacatagcagctgtcaccatggaaatggagagggaagtagcagcggacaatcattgccacaagtcgagcctcctctaccatatgaagacgaggtgattcatgttgagcagcaagatgatgagcccctcaacatgcctgtacaagatgaagaggtgaagaagcgcaaggggacaaccttgcgatatgtttgggatcttccacctgggaaacgtatagttgtaaaatgcaacagattagggcaacctatcggggatgaaggtggattgctaggacagtttttgggcacattagcaagaaatggagcttactgtccattagataagatgacctggagaaagatcaaagcagatgaaggagatttaacaatactacaatttgtccagacaaagttcctataccctccatcatgcgttcaatggatactgaaatcaattggaagagattggaggcgatacaaggctgcactaaaagataaatattttaacccaaagaagaagcgttctgctctgtataagctttgtccagacgatgtagaaaaagaccaatggattccacttatcaaatattggaagtcaaaaaaaggaaaggccctcagtgcaaagaacaaaagaagtcgttcaatgttacagaaccctcactcagcagggacaaagagttatgctcgttggtctgaggacttgagacaagatgatccaaataagaagcagccacatagagcaatggtcacattggagaacctcatcgatgaacaaccagagttggcacaaaatgatcaaggaagagttgcatgggaaggtgatgcgctaaataaagtattgggcaaagaaaaacctggccaagtgcacggaatgggattacttcctgttcctaagcaggtttatggtcgtacatcacatcatctcaagaacataaacatcactacagtgaatgactcatcatcggatgaagagacacatgttagaggggaagtgggggaattaaaaaaattagtcaaaacactgggtcagcgtattgaggagttggaaaacaaaggaacaagcaatgggaatagtgaaccaactatggcaacatctcagagaacttttgatgatggtattgaagagggagtagtacggactaatagaaagaacaaaagaagatgtgaggaacagcaaaatatgcaccatgacaatattctggatctttgtggcaaaaagcaccaggaggctgataacaacataggatcaccatgtcaagatgattcatcatcacagccacaccttgctcatgatcttcggtgggagatgaataaaaagaagcaccgaaatttagagaaatttgcaaagactacagaaaaacaggacactcagaagaagactgcacatcacatggcccaaaatagggtgcattcttcttcagtgaaggttggtaccacaataatcttggtgactgcaaaatatcctaacaaagaaactgtggcatatgctacttatttgagtagtaacccaagagacaaagtggatggtgttgagattggtaacgagttcactaaagtggttgtcaatcatccacttaaggaagatgaagagctcgtaaggccactaaagcactgcaagacaattgtgacaatgcttgtacgtgtgcccacgttcatcgcatttgctgcaacgcttcaccctgccagcctccgactcgtccatatcgttgcggatgcgacgagtcttcctccttccagtcttacctcggagcttcgatgggtcaggaatattgagtacttcatctactgtgacacatatactgcatctggtatgccacactccgttgcggcagcaatgacatgggtgcatggcctgtggagcagcttcggctttgcacaagagcaatga</cdnaseq>

Protein Sequence

<aaseq>MCSMKSTGKMARKKRLNIVHSSCHHGNGEGSSSGQSLPQVEPPL PYEDEVIHVEQQDDEPLNMPVQDEEVKKRKGTTLRYVWDLPPGKRIVVKCNRLGQPIG DEGGLLGQFLGTLARNGAYCPLDKMTWRKIKADEGDLTILQFVQTKFLYPPSCVQWIL KSIGRDWRRYKAALKDKYFNPKKKRSALYKLCPDDVEKDQWIPLIKYWKSKKGKALSA KNKRSRSMLQNPHSAGTKSYARWSEDLRQDDPNKKQPHRAMVTLENLIDEQPELAQND QGRVAWEGDALNKVLGKEKPGQVHGMGLLPVPKQVYGRTSHHLKNINITTVNDSSSDE ETHVRGEVGELKKLVKTLGQRIEELENKGTSNGNSEPTMATSQRTFDDGIEEGVVRTN RKNKRRCEEQQNMHHDNILDLCGKKHQEADNNIGSPCQDDSSSQPHLAHDLRWEMNKK KHRNLEKFAKTTEKQDTQKKTAHHMAQNRVHSSSVKVGTTIILVTAKYPNKETVAYAT YLSSNPRDKVDGVEIGNEFTKVVVNHPLKEDEELVRPLKHCKTIVTMLVRVPTFIAFA ATLHPASLRLVHIVADATSLPPSSLTSELRWVRNIEYFIYCDTYTASGMPHSVAAAMT WVHGLWSSFGFAQEQ</aaseq>

Gene Sequence

<dnaseqindica>6554..6658#6315..6472#5308..5506#5096..5215#4481..4567#4332..4400#4039..4101#3560..3901#3380..3421#3212..3304#2889..3092#2395..2639#2130..2300#1..22#atgtgttcgatgaaaagcaccggtaccaccatctaaattccatgtttatttctgtacaagaaacaaaattagttcccactgatgattattgaagttctgatcaaacatgcagttatttgataaaccgtggtagcatctgctagacaatctgaacaggttaatgacatatgttcagtgacattgattacattattgtgaaatgaattaattggatttatgttgccagatctatgtaattagttgtgtgcaaaatattcctgtttagatatcttgataatgctaagtaccgaatcaaaatgtatgctccgactaataatcaaagtttatgcaaagtacagaagcaggggaagattcttgtgtgaaatagtcaattttaggttactgcattcattctcacttttatctccacctctaccatgtggaactgaaaatttgttatgctcgtatctctggctgtacttccaaacccaaacaagcaggtcatatgtgtgttcttgtctataatgaatatagtgcccctgtcttaactgaaagtttagtagtacttaccgcatttaagctcaattatatgcatccagtttgacggagcgtggggctcctcaccgggagaccgcgctggcccccctttgccggttcggccggggaccctgggtgagactctaagctcccaatctgtggaaggttcgcgagacaggaagcacacaagacgccggcgatgtatacaggttcaggccgctgagaagcgtaataccctactcctgtgttttggtggattcgcgtatgaagaagctacaaagtatgagccagcctctcccttgttctgggttcctaatctggaaaagtccagtcccccccttctctaagtgggcaaggtcctccttttatatcttaaggggataccacatgcaccatttccctcttttttgtgaggacttcccctaccttttcataaatggacggagatttgtatagttgccgtccgagtcaccttctgatgggatggcctacaactacctccactttcgccgggagcagatgcgacgtggaatcgtggctgtctgctgtcgacatgaccggagtcagaccagtcacgtcggtcattcttgtccaccacgtgtcagcttagcaatctacatgttcgcccttcttcacacaacatcttgcctgtaatggttaggatgaagcctgacatatatctgaccaggactaacgtgccatctctgggaggtaacacgctagctccagctggggacgagcgcctagaagccctcgtcctgacgggatggggcgaggcgtgcgccagatcgcctgtcgccacctaacccgcaatctgaccggtctgtgactggtcacagaccggataaatgagtgcactgcactgcgttacatgcggcgtgacacgctcagccaaatcacaataaatgtggttaggtgagccccactgtgctcacctaacccatacacgcggagcgaaaacccacgaggggtcggggcgcctcggccctcggggctgaggcgggtgcggcccgaccccctcggggggactaagaggagggcgaacacatcaccctcgggcccgacgtcccccgagggtgccaggccacgtgggcgattgtgtctgcctcaaacctctagtcatgatactcctgatcccatgtcaccgacacagttatatcatattaagccatttataatttatagttatctctttgaacaattcataagttttcaatagatgtagttttccaatttctgcaaagcatatgattttcatgtagaggcggtcaacctatagcttttctcttgtagctgccatattacactctgctttagctttaacatttaagagcaattgatgatttatttgctttccagtactgtgggaatggaaggtgctgagaaaaaggaatatttatttgtttggttcttttctggattcttctctagctgaaagtgctacatccattatatttttgtcatgcatatactacacttataattgtatagtcttctaatcttttactccttgtgcagagatagttgtagttggtacaatattcccgtatagtcaagcatacttacacatagattaattcgtgctcttgaaatacagtaagccaattttgcaggcaaaatggctagaaagaaaaggttgaacatagtacatagcagctgtcaccatggaaatggagagggaagtagcagcggacaatcattgccacaagtcgagcctcctctaccatatgaagacgaggtgattcatgttgagcagcaagatgatgagcccctcaacatgcctggtaaaactttaactacctgaatcccaaatagtttgtgattgcatatatatggttaacctaaagttagtgagccttatgtcaattaattttgtagtacaagatgaagaggtgaagaagcgcaaggggacaaccttgcgatatgtttgggatcttccacctgggaaacgtatagttgtaaaatgcaacagattagggcaacctatcggggatgaaggtggattgctaggacagtttttgggcacattagcaagaaatggagcttactgtccattagataagatgacctggagaaagatcaaagcagatgaaggagatttaacaatactacaatttgtccaggtacctcaaacgctaaaatagcataagtataatgctctgtttgtattactagtcattactttttgcctactctcagattgatgcatctgttcatatccatggcaactgaatgttttcgattcaatgtttatatgtattttacagatattcaatgctgagttttcttacttgctgttatcccttgcctaaccattgacgtaatcatgcaaattaaaatacttctactctcattattcctatgtatttcagacaaagttcctataccctccatcatgcgttcaatggatactgaaatcaattggaagagattggaggcgatacaaggctgcactaaaagataaatattttaacccaaagaagaagcgttctgctctgtataagctttgtccagacgatgtagaaaaagaccaatggattccacttatcaaatattggaagtcaaaaaaaggaaaggtaaaaaatctgctccacaatctgtactattgtctcattgacatatattgtactgttgttcctaccgtaaacaacattggaagtgtgaactcaatgagactacattgcttctgtaataggccctcagtgcaaagaacaaaagaagtcgttcaatgttacagaaccctcactcagcagggacaaagagttatgctcgttggtctgaggacttggtgagccaatttgtttcgttcaaaattcatctatacatgttcactttactttcttacattacctttcattttcagagacaagatgatccaaataagaagcagccacatagagcaatggtttacttagcaactcacaaaaaaaggataaagataaaaatcaacacgtggtatgccatatacacataatccttccataaatatctaatatgtatgttatctaccttgtacagtgggcatatattttttcacttgcaggtcacattggagaacctcatcgatgaacaaccagagttggcacaaaatgatcaaggaagagttgcatgggaaggtgatgcgctaaataaagtattgggcaaagaaaaacctggccaagtgcacggaatgggattacttcctgttcctaagcaggtttatggtcgtacatcacatcatctcaagaacataaacatcactacagtgaatgactcatcatcggatgaagagacacatgttagaggggaagtgggggaattaaaaaaattagtcaaaacactgggtcagcgtattgaggagttggaaaacaaaggaacaagcaatgggaatagtgaaccaactatggtaaacgttataaatacctttgtccttaacattgaatttttagctacttctgatttcatttttgtagatgcttgtaaaataaaaaatttatgtgattcacactaaaatcttaccccttcctgatttcattgctgtaggcaacatctcagagaacttttgatgatggtattgaagagggagtagtacggactaatagaaaggtaatgtcaaagtaatgcattctatgtttctcaccatattttgtgcaacaatatttaaatatgtgcacatacagagggttcgatgcagtagacctgatcaagacgactcaatgagtaatcaaataaatatatcaatggtattttgtcgtttctaattgataaattttatttgaacactcaatacacatactggcatgtatagtaaatttttattgtccattccactatagaacaaaagaagatgtgaggaacagcaaaatatgcaccatgacaatattctggatctttgtggcaaaaaggttaggatttgttgttttcattcatatggtgcaatgcaatttatatatggttttacatggattatatatcatggaaccagcaccaggaggctgataacaacataggatcaccatgtcaagatgattcatcatcacagccacaccttgctcatgatcttcggtgggaggtagttcttgaatgcctattaaaattgtacttgtttctcaatgtgttttattcatctcactatgatattagagtgaaatataaacacgttgttgggagaactcctagttaggcaatgctacatctgtgaatgcatcatttgtgtgaaacataaacataatcttttcaaggagtactgctatatttttatagacattaatcaactgaaaattaagtagtagcttctagtgctcaagtttagctttggacccttcatctatgccatttagtgttggcaaccgaatgataaacatgaaaggatattaaaagcaatttgtcatatcttaataaagttggtcttgttcatttgtgctattggtttgtatataccatttacatgatctaaatactgttatatgtcatgtccttccatttttcctaattataagattaatgtgcagagttgggttcaaagtacaaaagttatgtaataatgcaatatgttctgacctctttgtaatgtaacaaaatttcttatgtctcaacatagatgaataaaaagaagcaccgaaatttagagaaatttgcaaagactacagaaaaacaggacactcagaagaagactgcacatcacatggcccaaaatagggtgcattcttcttcagtgaaggtagtaaaaacatacaaagatggtactactaaattattgtttaacaattaattattgtatatttcttaatgaatacattatttctattgtaggttggtaccacaataatcttggtgactgcaaaatatcctaacaaagaaactgtggcatatgctacttatttgagtagtaacccaagagacaaagtggatggtgttgagattggtaacgagttcactaaagtggttgtcaatcatccacttaaggaagatgaagagctcgtaaggccactaaagcactgcaagacaattggtgatgcccattatgaaggaatgtcgattgcttggccttcattttgtgtatgctcataataccttcatgtaatatatatatgatgaatactatatttgcaatgcaaatgctaatatataaatttgttatgtaggttcaaaagatcaatggttaaaattctcatgttttaggatcacatcaagatggaatcaacaagatatggagctgatgaagattacataagattagatatattctatatttttttgctagtagtttgttgctcgaaatatgtatttaccttttcaaaggacatgactctgaatttgtttgttttcaattgggatgatgtaattagagtgctcatcaaaactttcttattgcaaagtaatatcatggttacatcacttcgtttatgattatttgtcctattgtgtgtatgtgcatttactttattacaccattttcttaataaatgtattaatattacaaagtgcactacagttcttttgtaattatgttgcaatatgtaaaaaaggtgttacagaatatgttgctacaagtgaaaaaacaaattacaaacagtgttggtacaactagaaaaatggtgttactatgatgtatggtaacacataaatacgtgttgctatagcactaatgtaacaccttttcttttctacaggaacggtccaatgtgttacaacaaactaaactatagtaacatagtctatagtaacagtttactgatgtgttccaatagaccattgtaacacctttttagggatatagtaacacaaaatcatgttattaaatgcctatcctgacgtagtgacaatgcttgtacgtgtgcccacgttcatcgcatttgctgcaacgcttcaccctgccagcctccgactcgtccatatcgttgcggatgcgacgagtcttcctccttccagtcttacctcggagcttcgatgggtcaggaatattgagtacttcatcgttagtctttgtgaactccccagctatgccgaacccataatctcgccactccatgtatgatatactgcttgcttactgaagtactgtgacacatatactgcatctggtatgccacactccgttgcggcagcaatgacatgggtgcatggcctgtggagcagcttcggctttgcacaagagcaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0768400, RefSeq:Os01g0768400