Os01g0768600

From RiceWiki
Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0768600| Description = Conserved hypothetical protein| Version = NM_001050902.1 GI:115440174 GeneID:4325592| Length = 5316 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0768600

Description

Conserved hypothetical protein

Version

NM_001050902.1 GI:115440174 GeneID:4325592

Length

5316 bp

Definition

Oryza sativa Japonica Group Os01g0768600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34164128..34169443

Sequence Coding Region

34164804..34164861,34167147..34167243,34167328..34167648,34167727..34167832,34167901..34168584

Expression

GEO Profiles:Os01g0768600

Genome Context

<gbrowseImage1> name=NC_008394:34164128..34169443 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34164128..34169443 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcaagcatcagggctgcatcgacgctgtatctactggatcctaatcctaagcttccaggtttttttaccattatggtgcacttggttgttcatttagccactgaagcaaaattaggaggtcctgtgtgttaccgatatatgtattttgtggaaaggtatttgagtgtattaaagtcatatgtgcgtaataaggcacatcctgaaggatgtcttgcagaagcatatttggcagatgagtgtataacattttgttcaagatatcttgaaggttttgagacaaagcataaccagcctacacgaaatgatgataatgatgagtcagttgcatgttcagatgatgaatgcacaccatatctttttcctcatgttggaaaaccacttggcaagccgagaagttatgttattaggggcttgactaaaatgcaagcacatagatatgtgctcttcaactgtccagatgtcaacccataccttcgaactcatgctgatgagattagaagaacatatcggcaaggccgcatcaccccaaagattatcgagcgtatccaaaatgaaaaattccatgaatggttcagagctcatataatggatctagagaggaaaaatggcatatgcagtgtcaagaatgatcatagatggctggctcgtggtccgattggtccagcaaaaagatatcgtgctttcaatacccgtggcttccggtttaggcctaaacatttggatggagtgacacagaatagcggagttgtcctaagtgcaaaaacatccagttatactaaatcaagtgacacaaatccaatattgggtgatctaacatactatggtagagtcatcgatattattgagctaaattactctggacaattttcagtagtactgtttaaatgtgaatgggttgatgttgtttctggaaaaggagttaaaaaagataagtatggttacacactagttaacttctcacatctcatacatactggagaaaaagttgagcatgagccttttattttccccaatcaagcagatcaagtttattatgttgatgatccaatgaatcctgagtggtctgtggtaaggaagaacaaacctagagatatatatgacattggtgaggatgaatgggcaggtgacatagaaattgagccattccatgtttcacaccttggtggaatgtccagtaatgcaaacaattacaagcaatgggttagaacagatgttgaaggaacaacagtagatgttgataataatgctttgaataatgaaggataa</cdnaseq>

Protein Sequence

<aaseq>ASIRAASTLYLLDPNPKLPGFFTIMVHLVVHLATEAKLGGPVCY RYMYFVERYLSVLKSYVRNKAHPEGCLAEAYLADECITFCSRYLEGFETKHNQPTRND DNDESVACSDDECTPYLFPHVGKPLGKPRSYVIRGLTKMQAHRYVLFNCPDVNPYLRT HADEIRRTYRQGRITPKIIERIQNEKFHEWFRAHIMDLERKNGICSVKNDHRWLARGP IGPAKRYRAFNTRGFRFRPKHLDGVTQNSGVVLSAKTSSYTKSSDTNPILGDLTYYGR VIDIIELNYSGQFSVVLFKCEWVDVVSGKGVKKDKYGYTLVNFSHLIHTGEKVEHEPF IFPNQADQVYYVDDPMNPEWSVVRKNKPRDIYDIGEDEWAGDIEIEPFHVSHLGGMSS NANNYKQWVRTDVEGTTVDVDNNALNNEG</aaseq>

Gene Sequence

<dnaseqindica>677..734#3020..3116#3201..3521#3600..3705#3774..4457#atccaatctagtctcgttccccagcactccgtcgttgacgggagccaccaaaacaggcccgagcccctgcagcgccggccaccggtcgcctccacgccggtgcagtcgtgccctagccgccccggtggcctatccctaggaatccaggtccagttccgactcgcgcggcgtggctagcatcctccgcgcgtccccgttacatgtcccttgtgcgtgccacacatcagcaatagcgacctcaccatcacattttcacttggtgttggtggatctgtgcttggtgatcaagacggtcaagaccctaaggcagtcaagtgcatatgacggcaggttagcaaattgttaagcactaagtttttctatgcacaccaagtgtttgtcatttttcttgtacgcagatggcatcttaaaactttaccctgcatcttattgtttcaatttttaatctagctcacagaaactcttatattaaccatataatttaatctgtacaaccaaaaatattggctcatagtgcagtttaattcctcaattatcatgtaaagtccttaattctttattctgattgcttttgtcaatcccatctgcagcaatgtctgatccactcatgtactgctttgctatttttctgatctagccagtagataagatggtcgttttcgtttggttcaattaagcaagcatcagggctgcatcgacgctgtatctactggatcctaatcctaagcttccaggtacagttaacctcacctacacatgttcggtagacaaatttcttttggcttgaaggcataattatagaatcaaaaatatttagtggttgttgtcaaattaggaacactcatgtattaactatatttcttattttaacacagaaaattgatggatttgaataatattaagaagttattgcttttccctagaccaagtgatgagtaccttgctggaatagatggttttcttctgtttgcatatagggaaaagagtcttgaagataagatccgatgtccatgtaaggagtgtgtcaacaagtggttattaatgcgggatgaagtgtatgatcatttagtatgtcatggaatgttacttcggtatagtccttggggttgtcatggtgaaaccacatcattcatctctgccaacagtaggggaacagagtcacaaagtagaggaatggatggtaacatgcgccaactagtgcaagatgcttttgggaacacaaacaatgaccctccagtgaatgaatatgatgtacaaaattctttaaacagtgggccagaccatgaaacaaaagcattctatgacttgctccgagatgctcatgaccctttgtgggaagggtgtgaacttacaaggctgtcatttctagttctcttgtttcacataaaatcagttaacaagtgaaataataaatcattaaatgatttgctagcaatcttgcaacaagcaattccaaatggtaagaatttacctggaacatttgctgaagctaagaagataataggaaagcttggacttaattatgtcaaaattcatgtttgtccaaataactgccagctttataggaaagctaaggcaaacgatgacttttgttcaaaatgtggtacttcaaggtggaaaaacaaagaagataaaactactttaacaaagaaggaaaggagaagggcaaccccaaggaaagtgttaaggtacttcccaattaagccaaggcttaagaggttatttatgcacaaggaaacagctatagcattaagatggcatgatgagggtcgtacaaaggatggtgtgttgcgtcatccagctgactcagaggcttggaagtccattgactctaggaatccccagtttgcatcggattctcgaaacatcaggtttgcaatggctagtgatggatttaatccttttgggacattgagttcaacttatagttgttggccagttgtcttgattccatataaccttcctccatggttatgcatgaaagcatcttctattatgcttgcactaataattcctggtccatcttaccctggaaaggattttcatttatttatggaaccagtttatgaagagttatttgatttatttgaggttggaactcctacatatgatgcatctcaaaatgagatgtttcagcttcgtgctacagtactgttcactattagtgactatcctgggattgggatctttgcgggatatagtgtcaatggtgaatttgcttgtattatgtgtcgtgaagaaacgtgctctaaacgtttgaaacatggacacaagtattgtttcatgggacatcgtcgatttcttcctctggaccatgaattacgatataatgaaaattcttttgatggaactgaagaacatagagtagaacctcttgcttattctgaaacatcagttttacaaaagatagagaaaattaatgattttgagaagtcaaaaacatggaaatgccgtagtggcttattttcgttgccttactgggacttgaatgtactccatcataatcttgatgtaatgcatattgagaagaatgtttgtgataacatatatgggacattgttaggactggaaggcaaatcaaaggataatttacaagcacgcttggacctacaagaaatgaatataaggccagatttgcatcccataagaaaagctaataataagtattatttgcctcctgcttcctatacaatgtctaaacgggagaaacatcaattttgcaaagttctccatgatattaaggttccagatggatatgcagaaaacatctcaaaatgtataaatgttagtcaagggaaaatttcaggtcttaaaagtcatgactgtcatattctaatgcaagaacttctcccagttgctttgcggggtgtgcttccttacaatgtcacttttgtcttatttgatctatgtggatattttagagaactgagttcaaaagtcctgtacattgatgtgcttgacaagttagaggaacaaattaaaatgacattatgtcgtttggagatgatatttccaccaggtttttttaccattatggtgcacttggttgttcatttagccactgaagcaaaattaggaggtcctgtgtgttaccgatatatgtattttgtggaaaggtacatttctctcacaaatataatttcatttgttatctagtatagaatttttaacatttttaatctttctctttatttatgtaggtatttgagtgtattaaagtcatatgtgcgtaataaggcacatcctgaaggatgtcttgcagaagcatatttggcagatgagtgtataacattttgttcaagatatcttgaaggttttgagacaaagcataaccagcctacacgaaatgatgataatgatgagtcagttgcatgttcagatgatgaatgcacaccatatctttttcctcatgttggaaaaccacttggcaagccgagaagttatgttattaggggcttgactaaaatgcaagcacatagatatgtgctcttcaactgtccagatgtcaacccataccttcggtattagctcaagatcatacacttcatcactaatcattttcttcaaagcatacttcatgacactttttccttttacagaactcatgctgatgagattagaagaacatatcggcaaggccgcatcaccccaaagattatcgagcgtatccaaaatgaaaaattccatgaatggttcagagctcatgtaagtttcgtgttattatcatttagatcaacaaataaaatcatgactaagtaatcctatgtacacagataatggatctagagaggaaaaatggcatatgcagtgtcaagaatgatcatagatggctggctcgtggtccgattggtccagcaaaaagatatcgtgctttcaatacccgtggcttccggtttaggcctaaacatttggatggagtgacacagaatagcggagttgtcctaagtgcaaaaacatccagttatactaaatcaagtgacacaaatccaatattgggtgatctaacatactatggtagagtcatcgatattattgagctaaattactctggacaattttcagtagtactgtttaaatgtgaatgggttgatgttgtttctggaaaaggagttaaaaaagataagtatggttacacactagttaacttctcacatctcatacatactggagaaaaagttgagcatgagccttttattttccccaatcaagcagatcaagtttattatgttgatgatccaatgaatcctgagtggtctgtggtaaggaagaacaaacctagagatatatatgacattggtgaggatgaatgggcaggtgacatagaaattgagccattccatgtttcacaccttggtggaatgtccagtaatgcaaacaattacaagcaatgggttagaacagatgttgaaggaacaacagtagatgttgataataatgctttgaataatgaaggataacagaggaaaatagttactctttcatgatttatttcattacttcaaggtatatgcaattacctgatctaaaaccttttgatggatttatttttgttagcaaaggtgcttccagttttagaactatcgaaaactctatccaactgaatgcatctaaatccaacaatatttatggtcttttaatttaacttttctgcctttttggtgtacggtacaactattaggtccactggttaagtatgatcttacattatgttcttgtgagaaatatgattacaagcgtagtggatgaataatttgtggttaccttggctattctttctattaaaagatagcaataatcgttgtgtttatatttatttctgattgattaaaacatgttcatgcatgttcatgtccattctttgctctatattgtttagtttcaggtccattattttgatgcagacgcagttacattggcaaggtatctgtctttctagattctattgatcagctcgctatctccatgtcttctttaacaacaaaagaaatgtcatgtctttgctgatgaacttggtttcttttcctacatggccaggtggcatcggggtgttactgtttctttcggcaagcgaaagtgaacaagcagctgtcactaagcaacatatggcagttctagtccaagcaaacatgagtttaggccagtcttcagtagtcaataataattcccaatgtagtctatctgtatagattattttaaatttgttcgtgtgagcttttccttttctattgctatattgattagtcctgtaatcatgtctgggttatgtgatctctctagcatcttgttttttaccatattactgaaatgattattctt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0768600, RefSeq:Os01g0768600