Os10g0509200

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0509200| Description = PAP fibrillin family protein| Version = NM_001071564.2 GI:297610759 GeneID:4349082| Length = 6714 bp| Definition = ...")
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Gene Name

Os10g0509200

Description

PAP fibrillin family protein

Version

NM_001071564.2 GI:297610759 GeneID:4349082

Length

6714 bp

Definition

Oryza sativa Japonica Group Os10g0509200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20017093..20023806

Sequence Coding Region

20017119..20017292,20017371..20017478,20017586..20017777

Expression

GEO Profiles:Os10g0509200

Genome Context

<gbrowseImage1> name=NC_008403:20017093..20023806 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20017093..20023806 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcgccgctgctcccctgctccgcctcccgatctccccaccctccccaccgccggcgcagacgccgccgcctctcctggcgtgtaactccgtcaacggcgtccgccttcgccctcagcgcagcaggcaaccgcgccgcgccgccgcggcggcggcaacggcttcgctggcggcggacacggagcggcggaagcacgagctgctgcgggcggtgcaggagacggggaggggattcgcggcgagccccgaccagcgcgcgtccatcgaggaggccatcgtgagcgtggaggagctcggcgccggggaggggtcgccgctggacctcgcggcgctcgacggcacgtggaggctgtgctacacctcggcgtcggacgtgcgcgtgctgttcgaggccgccgagaggctccccctcctgcaggtgacttctgtctgttcatcgatttcgttgactaattcgacaataatttag</cdnaseq>

Protein Sequence

<aaseq>MALAAAPLLRLPISPPSPPPAQTPPPLLACNSVNGVRLRPQRSR QPRRAAAAAATASLAADTERRKHELLRAVQETGRGFAASPDQRASIEEAIVSVEELGA GEGSPLDLAALDGTWRLCYTSASDVRVLFEAAERLPLLQVTSVCSSISLTNSTII</aaseq>

Gene Sequence

<dnaseqindica>27..200#279..386#494..685#ggccatccactcgactccaccctgaaatggcgctcgccgctgctcccctgctccgcctcccgatctccccaccctccccaccgccggcgcagacgccgccgcctctcctggcgtgtaactccgtcaacggcgtccgccttcgccctcagcgcagcaggcaaccgcgccgcgccgccgcggcggcggcaacggcttcgctggtactgcgcctcgcactgttcctctcgtggtgggaagtacgctgcgcggggctaacccccagagctgcttgcttgcaggcggcggacacggagcggcggaagcacgagctgctgcgggcggtgcaggagacggggaggggattcgcggcgagccccgaccagcgcgcgtccatcgaggaggccatcgtacgagaccggagacccctacacatttgaatctctcatctctccttcgtgttaggctgggtggggggaaaccccgatttgcgtgctgcgtctttgttgttgtgtaggtgagcgtggaggagctcggcgccggggaggggtcgccgctggacctcgcggcgctcgacggcacgtggaggctgtgctacacctcggcgtcggacgtgcgcgtgctgttcgaggccgccgagaggctccccctcctgcaggtgacttctgtctgttcatcgatttcgttgactaattcgacaataatttagtccttagcaactgcagatgccgatcatgccataattttagcagttctcagaaaggaaaaaaaatggaaatgtctgataatgtgtgaaatgctgggtgaaaattagcgtctaatttcgatctgttttggcgacttcagcattctcatgaaagcttgaactattagagatttaaaaagttgcttcagctggtagtacaattgctctgtgatattgtaattgtgaactacagattgaggtaagggttgggatccattcagccatgtgatgggggttgtgcttatggatacaggtggggcaaatataccagaaattcgaatgcaaggataggtcagatggtggggttgtgcggaatgttgtgcgatggagcattgagaacttgctggaggtaaaatttttaatgtgcgtctatctttattcctttcttcagtttcttctcaagagtgtttctctttgtggccatcttgtttggtgccatcgcaaagttggaatacaccatgtgtccttgacatgcgccatgtagtcctgggctgcacatgtaattttcacatgctgtggtatcttctagttcacacatctttgcggtggtactttcctaaatttctcttttgtttcatgatcctaacttcaccttacagttggtagtagtttttatcatccattcatccttacatctgatttcattcatttgagatgagatgtagctggaatttcaactgtttacatttttatgttgtacggatgctattaattgtgataagacaatatgcaaaaggatgatttaattgttaccttgaagtttctggtaggctgaccaacatgcaatcttgctttgcctttagtatctcaacagcgtcaggaaaatgaccttcctctaggctgattatgttgttctatagtctaactctcaacatggcaactgttcatctccatgagtgttgatatacataaaagtatgatagttacagctttgcagtgatttaaaacgtctatgaaatgtttatgaatttattatttccacaaatagtattattttatctttatggaatcatcttccttttttttctttcatgtagtgcaatctaactcgaattttcagataggaaaaatgcttgttcttttttcatcttttgcattatgtaaacagtagacttccagatcattgtgtattattgataaaccaccatttaatttctagtgtttaatctcaatgttttttagctcttttatgcttgattgttttttgtgctctctataggagcaagagggtgcaacactgatggtctctgcaaaatttgctgtcatgtctaagcgcaacatcttccttcaatttgaggaggtaattttctgatttgataatatataaacctcttatttgattcaagtgttacaaatgaaaaaaaaatggcatccatgtagttatattatacttacttcagcatgctatggttagcagggatgtgatatcctctcaccaagtagcatatgaagtatagcagttggcattctccatgattgtattctcgtgcaagatggtgctatgatgtatacatgatgaaacacattatatcttcataattctaacattcttttagcaaccaaccgaaggatgaagcagcctacccaaatcatctattacataattccagttttcttgttcatggatatgagtcattctgtgctttattcattttctgctattgtcatccacaattttatagttatgccctctagagagttactattatgctttcattttgtttctcttttttagtttttcattatcaatcttcttcttctgtggttttgatatttagtttagttgctacttatgatccatcgtttaacaggttgttgtagaaaatatcaagattagtgagcagctacaagcactaatagctcctgctatactccctcggtcattttttagtcttcaggtaatttcctttttttacttgcatgttacccttattccttcttaacttctttcgtctgttttccccccttttttgtcatcgacaaacttaggcatccatctataagagttattcccaattttaggagctactagtatccacaatatacaaatattaatgtttttctgttctgcacttctgctctgaaaagagaatgatgaaatggggagttattaacatttaggaccagcatttgtgcatttgagatgtgtattgcagttaggatttaccttaccatcagacaagaatttcattgcagcatgtttattattgtagatattgcagttccttaaaacttttcgagctcaagttcctgttaatggccctgaaaggtatgtttccagtgtatgttctttcatttcttgcttcctgtgttctgtaagttccagtttaattaaaatctcaggagatcacccggaggactatattatctttcttaccttgaccgcgatatgctcctggggcgatcggttggtggtggaggagtttttattttcacaagagcacagcctcttttgtgatgatttcagaattaccaggagtataccatttgaaggcggcaattgaacccatgcaagaggtatatatagttagaaagttagcaacactttacaagtccctttttcatatgaaatctgattattgtcttattatctcttcttctttttttttgggaaaaaaaagaacttgcatgccaaaacaatcgtcagttttagttcagttagttagcaccttctcactttatatcttgtgcattagcaaacatgtatacaacactgaatgtattttatctcatcagttatttgtatcaatgccacataactccagcactacccttttattgcatagagttcttctgccccttagcagggagtcttcaacatctgttgtcaatgctcatgcaatgtaaaaaattgtacctatctgcaaaattataattgatgttgttgggctttgttttagtttaattaaccaatggtggattaaataaacactctattcaatgagtaaataagatatgtttgtttctaaacaaaatagtcagataggtttataattctatttggtgtgagcccgcaacagatgatattagctgaacttccttttgtcataatgccgtttattgtagattgttatcaatttgtcacagaaaattgtttaaagctttttcctgaacaaattgttgacctccttgcatacttgggtccttttgcatgccattggagccgacatgaagcttgataaacgatataaacaactttcttaagtacttacatatgatacctgggttgtagggttactggaactaactactatctctgctgctgtgaactatgaagttaatttaatacctgcatcatcataaaacaaaaccttctgctgctatacctgtttaggggcatgcatttgtgggggcatttctgaattttcggttgagtgaaaaatgttttgtatagcttgacaagaaaaatcttgactttctttcaaaaacagatatgtaattttaagtttatggggtgtcacattaatgcgcatatatttcccaaaagagggggttcacccaaaaaaacaacacatgccgtttctataattggacagatttttccttgatgtctctagaagagcctcctttggatcaaagctatcacatggaccataccactgtgccgatatagacaaatttgtggtagtctattcagaaagtaggacatgttggtcttgtgtcttggcctggtaaaactggtcgctactaaacttcaaacaatgctcatgcccaagtttgtgtacactgaatttgacaatactacttggcccaattctgtgtatgctacaaaactctctgctgctatgttgtagcaaaccacattatttgcaacctactctgtattaaatagtattaataaaagatactactagtaaaaatcacctccaactaaaaagtccgctatgcgcaacagtttacattttttttatcaattaaccacggaagcctgtttttgaattggcaccatagaccaaaagaaaaaagattaagaaaaaacaaagatatcttgattgccaaatattaaaccttgatgtagacattttttttgttatgggaatttcataagaagcaaaaagcttttctgtcaaggtgaacatggcaaactctataccacttgttttggtgggtggtggggaggtggaggggtcatgatggggcctcagtcctcaagctctctgcatcacatttttggttcaacgccaattatcgctctttagtctttgctacattttatagtcccctgaggctgtgtttacttcacaccaaaattggaagttttgttgaaattggaacgatgtgacggtaaagttggaagtttgtgtgtgtaggaaaattttgatgtgatggaaaagttggaagtttgaagaataactttggcactaaacacggcgtgagtcctaaaggaatttgcgcctcttgagttgttttctgttcaattgaatcctgttagtacgatggacaagttgatctttctttcttatgaaatatactatgaagttaggccctgtttagattccaacttttttctttaaacttccaacttttccgtcacatcaaactcacacaaacttccaacttttctatcacatcgttccaatttcttcaaacttccaattttggcgtggaactaaacacagccttacctgaagaaaatttactcattgattttctgacttcactggagtacccatactgtgaggttcccatcttttaggcaccttttcaaataacaccatacctgtagtactgtatacaggtcaaatcatgtttgaaagaggttccaatcatcacttcatctatcttattaatgacatcctcttggattctttaaacaagctcattgcgcaaatgtcctagtcatcaaaatgttcgacctctaatttcagtaattgcaaacacccatccactattccagtgatgatgtttatcttttacgaaatataaaaattggataattttcttgatggaagtgtttgcagaagaataaatgaatgaggagtgtccatgtttatcattgtatctgtatccaagcacagaaatgggaaaatagattagcaagcaaccttttacgcactacactacactttcctctttcacaaataccctgttgcaacgtaattcctatagccaaacatcgggagcccaatggatttgcttcttcttcttcttctttttttttttttttttttttggcactggggcaccaaactggcacctcaccatgcgatgaactattacgccatgcagttggttaatccttatgattcgtatagttaccatttttctagtgttcctagtttattgtcctttctttcttttactctgcaaccaacatgcttgaagtttaattgtttctacatgatgatttttgtacagattgtgatcaaaatagtgctcttagtttactttttattgtaccgatatcggtgacgtttcatggaaaagtctagagagagaaaaaaaaagcttgatttatcatctggtggtgcagtcgttttctctcattgtgtggcctaaccgaggtcgtatctcatacagtttcgtttcatctgtgtgctctataggttttctatatccactggattgatttcactttcgttatattttagctcagttttacatattatgtggccaaatttctacatcatctgcgtgctttattggggtgaactgattgagctggccgtgtacagttgcaatcccctacttctaaaaaaatccattatgaagggagagatgtagtactactttattggtttcatgtcgttgtctgattattttcagtgctctttttatttactactctggctgtgtttagttcagtgtaaagtttggattttgattgaaattggaaatgatgtgactgaaaagttgtgtgtatgacaggttgatgtgatggaaaaggactgaagtttagttctaaacacagcctctgaaagtagatgaactcttgatggcgtttttgtggttaccctgagagctcgttatagtttaactcaattctgtctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0509200, RefSeq:Os10g0509200