Os01g0773000

From RiceWiki
Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0773000| Description = contains InterPro domain(s): IPR001656| Version = NM_001050932.2 GI:297597695 GeneID:4324714| Length = 3091 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0773000

Description

contains InterPro domain(s): IPR001656

Version

NM_001050932.2 GI:297597695 GeneID:4324714

Length

3091 bp

Definition

Oryza sativa Japonica Group Os01g0773000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34420181..34423271

Sequence Coding Region

34420737..34420833,34421748..34421812,34421920..34421992,34422100..34422350,34422738..34423028

Expression

GEO Profiles:Os01g0773000

Genome Context

<gbrowseImage1> name=NC_008394:34420181..34423271 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34420181..34423271 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgaggccgccatctcctaagccctctcttatcccctctcgcctacccaaaacccccctcctctcgcctcgctccccgccgcgtcgccagccaccgcaccgtagccccgccgcccgccgcgcgccgcgccccactgtccgagcccgacgtcggcatctccctcttcgcctccgccctcccgggcttccgcggcgccctcaagcagcgctactccgacttcgtcgtccacgaggtcgccctcgacggctccctcgtccgcctcacctccttcgacctccccgacggcgaggaagttcatgatttcttcaagaggaacttcgaggccttgcttacagatacagttgagcacagcgatggaatccagaggtgcatcagggtgaggttgaagccggggcgacgcgaacggagggatgttgatgggagggggaggaataggaaaggcacgggaagttcgggctggagagatgacaagccatttgatagtagaggatctataatctggcctgaccatctagggaagttcataaggttatgtcatctgtttcatctttacaaggagaacaaggacacccaagaggcactaggaaagataggcaagatgctagggcttcagcctcgatcattcgggtttgcaggaacaaaggataaacgcgctgttacaactcaacaggtatccttgagtgttgttacagagtctgaagatgtgattaaggctgctcttgatggattaataacaaatggatttatcaattattatggtctacaagtacaataa</cdnaseq>

Protein Sequence

<aaseq>MRGRHLLSPLLSPLAYPKPPSSRLAPRRVASHRTVAPPPAARRA PLSEPDVGISLFASALPGFRGALKQRYSDFVVHEVALDGSLVRLTSFDLPDGEEVHDF FKRNFEALLTDTVEHSDGIQRCIRVRLKPGRRERRDVDGRGRNRKGTGSSGWRDDKPF DSRGSIIWPDHLGKFIRLCHLFHLYKENKDTQEALGKIGKMLGLQPRSFGFAGTKDKR AVTTQQVSLSVVTESEDVIKAALDGLITNGFINYYGLQVQ</aaseq>

Gene Sequence

<dnaseqindica>2439..2535#1460..1524#1280..1352#922..1172#244..534#attcaatcgaggccgtcaatctcaaaccgacccacctccgcctccgagccaccgtcctcacgcacgcaccttcacacaccaccgtcgaacggcgcgcgccggagaagattttgccgccaccggcgccttcccctccccggcgaacgacgccgccgccgccaccgccaccgtcgccgccgcgcgtccgggcccctaccatccacccggcggccgtcggccattgtctcaccgtgcgccgcccgaatgcgaggccgccatctcctaagccctctcttatcccctctcgcctacccaaaacccccctcctctcgcctcgctccccgccgcgtcgccagccaccgcaccgtagccccgccgcccgccgcgcgccgcgccccactgtccgagcccgacgtcggcatctccctcttcgcctccgccctcccgggcttccgcggcgccctcaagcagcgctactccgacttcgtcgtccacgaggtcgccctcgacggctccctcgtccgcctcacctccttcgacctccccgacggcgaggtccctcctctcgggctcctgtttctgctctgctttgccattacagctctcctgctctggatttgggagctgtgaagctcgtgacaccggttaatttagcctagcgctgtttgtggatttgcagtgtgtagatgcgaaggaaggcggcatggacgaagcacaggcgctggaatcgttccggctgctctgcggcgacgcggactgtgaggcattgagggggtttctggagagggtttcagagggaggcgacagcgatgtctcaccgatcattctctctgctgatgccgacaagactcatcgctcggtgtgctatcttctctaactgttgttgttttgtaatgaatgagaagctggaagcttgtagtcattggtcctactttttgttaggaagttcatgatttcttcaagaggaacttcgaggccttgcttacagatacagttgagcacagcgatggaatccagaggtgcatcagggtgaggttgaagccggggcgacgcgaacggagggatgttgatgggagggggaggaataggaaaggcacgggaagttcgggctggagagatgacaagccatttgatagtagaggatctataatctggcctgaccatctagggaagttcataaggttatgtcatctgttcagtttcatgcctaactactattgtgcccgatcatctttattctgttcgtgtaagaatgcaaagcactgcaccgttgacttacagtatgtaattcacataccaggtttcatctttacaaggagaacaaggacacccaagaggcactaggaaagataggcaagatgctagggcttcaggtgcatgttgtttgctgtttcattgaagtatttgcagggtgtcctgtttttagtttataaattcattcagctgtttgctaattgattggtgactaaacttcccacagcctcgatcattcgggtttgcaggaacaaaggataaacgcgctgttacaactcaacaggtatccttgtgtagtaatttatgctgtgaagctcatgcatataatgactttctgactttcttttcatgggtttgatgggcaatctgggtgatatttaaaataacaaacttgttatataaagaacatgaggtaatgatttatatggaaagaaattaagagaggttgttggtattggctgttgtcatctcaaggaagaatgggtgctatggtttgaaaataaacagaaagggctatgttttcaacatttcttgcagtcatgatttttctggttctctaacttctgatcaggtcacggttttcaaggtgcaagctagtaggttggttgctcttaacagtaagctcattggcattaaagttggagacttcaggtaagaaagtgcatccctctttcagcatcaatgtaatgtcattgactaaaagcaattgactgcctcagtaatttatttaacctgttctagttatgtgaaggaaggtcttgctcttggtcaactgatggggaaccgatttacaattaccttgaggtgcatgttctccctgttactggtggcattctattataatggtagtatagcagaaatatttttggtgaacttttttgcattctgaaaaatgtatgctgaaaaagggctgtgacacacagacgcaagggtggaatcaaacccagagaatgggaattttgccagttcatagcccatgtagtgatagcgccgcagccttacttagtactaagtactaacccttctattatggctgggtcatggcaaaatcctagctccgcctctgacataatgcaatgtttctactatttgacgattatacaaattataggaatgacctggcatgcttttgttcttctttctttattcttcaactacagaggaaattgataattcatactttttccatttttattatctgccaggagtgttgttacagagtctgaagatgtgattaaggctgctcttgatggattaataacaaatggatttatcaattattatggtctacaagtacaataattcaactcttctctcttttctaaagcaggctcctggatactgcacttgttttgcatttgctgagacacaataaataaataccatgctgataggctatatgaaatcgtggtcatttgctggaacgcaccgaacctgttgcaactattgctctaaaagaaaaaagagggtgtcaaaagcccctgctcttttggaacatacagtgttatctcagcaaatgcaaaccaagtgtggtgtgaaaaggtcaacattgccctgttcactttcctgtggttcaaactattttttgttgtgttatggctagtaaaaaaatcttcgtttgtgtgcttagcgctttggtagtggttcagtgccgaatcaccaagttggtgttgctttgcttagaggagagtggagaaatgctgttcaattgattcttggtccaagggaaggagatatccttgttttctttttctaatatgtttaccagataatatatgtttaaatgtgtgaatttgttcgacttaactttgcggaaaacaatgtgataacataaataaagtgagggagcattttaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0773000, RefSeq:Os01g0773000