Os01g0774500

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0774500| Description = Conserved hypothetical protein| Version = NM_001050940.1 GI:115440250 GeneID:4327153| Length = 10223 bp| Definition...")
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Gene Name

Os01g0774500

Description

Conserved hypothetical protein

Version

NM_001050940.1 GI:115440250 GeneID:4327153

Length

10223 bp

Definition

Oryza sativa Japonica Group Os01g0774500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34503422..34513644

Sequence Coding Region

34503914..34504159,34504259..34504400,34504496..34504806,34504905..34505034,34505131..34505361
,34505506..34505564,34505665..34505888,34513388..34513574

Expression

GEO Profiles:Os01g0774500

Genome Context

<gbrowseImage1> name=NC_008394:34503422..34513644 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34503422..34513644 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggccagctgcatcgtcgtcctcctcctcctctcgcgaccggctgacgatcagccggccgacggagaaggacgacgtcgtagaagagaagagggacggcggcgacgtgacggcggccgtgccgaggctggcggtgtacggcgccggccgcgtgcacgagatcgagcggttctcgcactacgttgctaagcagatagggattgaggatgtgagcgagtgcccccacctttgtgcactagcttacggttatctgaagaagactgagggttatgaacaaaacctactcgcgttcttccataacaaaataaactcggacgctcttctcgtgctgttgattgaggagctagacaaatgtatactcggctacttctccttccattggaaatttgccactgaagtaatcacacaggttctaacagcagagcagcctagaagaaagctcaaaaccatggtgttagaagccactagaaagatgaggtttgagagggtgtcaaggaagctgaaggtgacgaggctgttctccacgctggtggaggaactgaaggtcatcggggtcacctgcaacgacggccagctgcgcgacgccgacgccgacgtgatggtcccggcggctcaccgcgaccgcagcccggtcctgctcctgatgggcggtggcatgggcgccggcaagagcaccgtgctcaagcagatcatgaaggggttgttctggtccggcgcggcggcgcacgccgtggtggtggaggcggacgcgttcaaggagtcggacgtcatctaccaggccatcagctcgcgcggccaccacaacgacatgctgcagacagccgagctggtgcaccagtcgtcgatcgacgcggcggcgtcgctgctggtgacggcgctgaacgaggggcgggacgtgatcatggacggcacgctgtcgtgggagccgttcgtgctgcagacgatcgccatggcgcggtccgtgcaccggcagcggtaccggatgggcgtgggctacaaggtcgccgccgacggcaacgccaccgagcagtactgggagcccgtcgagggcgcccccgtgcccagcgggaggaggccctaccgaatcgagctcgtcggcatcatctgcgacgcctacctcgccgtcgtcagggggatcaggcgagccatcatatcggggcgagccgtgcgggtgagctcgcagctcaagtcgcacaagcggttcgccggctcgttccgcaagtactgcgacctcgtcgacagcgccagcctctacagcaccaacaccatcgccggcgcgaagttgatcgggtggaaggacgtggggagcaggctgctggtggacgtggaggagatcgggctgctggacagggtgagcaggatcaacgaggaggccaacggcgtgcacgagctgtacccggacggccacccgacggacggcgccgggtcggtgtgggaggatctggtgtcgtcgccggccagggccgcgatacagcgggagctcagggaggccatcctcgatagcgaggcctgcttcccgtcgccgtag</cdnaseq>

Protein Sequence

<aaseq>MRPAASSSSSSSRDRLTISRPTEKDDVVEEKRDGGDVTAAVPRL AVYGAGRVHEIERFSHYVAKQIGIEDVSECPHLCALAYGYLKKTEGYEQNLLAFFHNK INSDALLVLLIEELDKCILGYFSFHWKFATEVITQVLTAEQPRRKLKTMVLEATRKMR FERVSRKLKVTRLFSTLVEELKVIGVTCNDGQLRDADADVMVPAAHRDRSPVLLLMGG GMGAGKSTVLKQIMKGLFWSGAAAHAVVVEADAFKESDVIYQAISSRGHHNDMLQTAE LVHQSSIDAAASLLVTALNEGRDVIMDGTLSWEPFVLQTIAMARSVHRQRYRMGVGYK VAADGNATEQYWEPVEGAPVPSGRRPYRIELVGIICDAYLAVVRGIRRAIISGRAVRV SSQLKSHKRFAGSFRKYCDLVDSASLYSTNTIAGAKLIGWKDVGSRLLVDVEEIGLLD RVSRINEEANGVHELYPDGHPTDGAGSVWEDLVSSPARAAIQRELREAILDSEACFPS P</aaseq>

Gene Sequence

<dnaseqindica>9486..9731#9245..9386#8839..9149#8611..8740#8284..8514#8081..8139#7757..7980#71..257#tagcttggcgcgcgacggacggatcgatcatcggccgatgcatgcatgggcgcctgtgttctgagccagcatgcggccagctgcatcgtcgtcctcctcctcctctcgcgaccggctgacgatcagccggccgacggagaaggacgacgtcgtagaagagaagagggacggcggcgacgtgacggcggccgtgccgaggctggcggtgtacggcgccggccgcgtgcacgagatcgagcggttctcgcactacgttggtacgtacgtacggtttctctccatcgatcacctaattaatttacgttactttgtttttgtttgaagccaaaccttaaacgtacgttgctcttctcacgttgttagccagctagcgcgtcgcgtcgtttctgaattcttaaattccatgagacgtgtgctccgatagtccgattcttataatgattttcattgggatcagttttacattcgtaagagcaagtttaatagcataactcattactatctccaaatcatatatagaaaatacaatagtcaattcatacaatagcgcttactatactattaatacccgatctcacttgtcatacacacattacgtcttgaagccgtgctgcagctggctacatatctatagcctgctgtttttctctctctttttttatctctttaaaatatgtttatagttgacttatagcctgctattgtacctgctctaacacatgaggcaaagaagcaaagctagtggaaaaaaaaagggggaaacttgaatgcaggtaaagcgactttggagccagtccatggacgcatcctctgtatcggattcgatgcacagagttttgcatctgaacattttggttaagctagctgtagtgtaaaaagttcacatggaccaaaacattttattctcaacacttcacaaatgcaatagaaatgactccggctcgggcgcctgatggagggtttttaaaatcgggagctgatttcagcatgacatcagcgtcacgtatccttgcaaaaccactttaaattgatttttctcttaaattacttacccaaattatgatccgatcgcactattaaattcattacaattaaaatttcaaaacaagaccacacatggatatattccgacgaaaaaatagcttattattgaattatttttaaatgttgcacgatgttccatcaggtatatcggaattgtttcactaagtagatcgaaaatgtttcactcgtttaaatcgggtgttgtttcaccttatataaaaacaatgtttcagcaaatagcgaaagaatgtttcagttcactataacgttagatctatgcatagtgaaacattgtgagtacactaggtgaaacattttttatggaacaaaaaatgaaacgaattcccataatagagggtttccaaaatatgtaggtgatttgttgcaatagagtatttcagttcactgcaacattagatctatatatagtgaaacattgtgagtgcactagatgaaacatttttttggaaaaaaaaataaaccaaattcccttaatagagggtttctaaaatatgtggataattaatttgttacaatggagtatatgttgcaaataagtggcaggtgagagcagagacgtggtgaggctcagggacagagagcgcgcgtcgtggaggagggagcgcccgatatttctccctcccccgagcgaccgatccggggcattccccaaatgcaatagccattttttacgatcatctgtaatagtatatcgtacagttttgtagcgcccgttccgtcgtggcgcctagcgggaaaactatctcttaaaaactctatttgcgaaatctgtttctttgcttgttgtctagtgtccgtgccatctcagatctcaaatccccgatctatcgccgagttcaatcccgaatccaaatccttcccaaatcaattcctccgcaaaagtctattttgcctccccgggttcgatgggccgaatctctctcggcccatctccccctccctccccgggtctctctctctctctctctctctctctctccctcttctccgctctgcccgcccgtcgcgcgcgcgtgcgcgtgagccgcgccgagccgagccctcctgcctcgcgtgcgcgcgcccgcgtggccgctgccctgccgcgcctgcgccgtctgcgccgcccggccccgctgccccgccgcacctggtggccgaccgcctggtcgccgccgccgtcagcctctgccgcgtctgcccgcgcctgccgcccgtgtcgtcgccccgctccaaaccgccccgccgtcatcgccgtcgtcatcgcccggcccccgccactccgcgcgcaagctgccaagggacggaggcagagctcctcctccctctgccgcgtcgtccccgctccctcctccttttcccgaagaggcaaggggacaagcccccttttctctccctcttttcccctttttcctcccgccggcgtcatcctcctccctcctccctgtcgccgctttggccgcgaccgccgaacgctagccctctcctttgaccgccctaagtcggttcccaaaccgacattaccatcctataaacccaagcttccccctttcctttcctctcccattcgcctccacgccattgccgccgcctcccgtgctctgttcgccgtcgccgttcgtcgttgcgcgtgtcggaggagccggcacgagcaaggacgcggaaggggactccgagcgcgcccactccttcctcttccccggcccgaggccggagagattactcccgcgccgtcggcctctcgtcactgcgcccgcccgcacggtagtgcatctccccgttctccctcctcgctccatctcctccccttagactcgggtagtagcacgagtagcctccccgtagctagccggcgccgccccgaccgttgccgccgctcgccgtgtgctcgccgccgtcgccgcccgagctcggaagcgccgctcgtcgccggcctcgctcggcgcagctccgcccaatccaacgctagcatcggattcccgtagccgcgtagatgctctcgccgccgggaatcggcccctcgtgacctcgtcgccgtttcccccttctcccgccgccggttgccgccgccgcaattcgccgccgtcgggcatcctccggcgaatccgagcagttggctcgtctcccctcgtcctgtgcaaccacccggtgtgctcgctttcgcctgtatcgccgtggttcgctccgccgctcgccgctgtcgtccgccgtccgtttcggccggcgtcgtcgtctacctcccgccggcccgcgtggcagccacgtaggcgccacgtcggcgccagctcggccaaaaccgggtcgagtcgaccccggttagccgctccctccccatgcgcgcggtccaccgcgagccgtgaggctgcgcgtgggcccgccgcatccgcgtcctccgcgaaccgcgcgcgtgcaccgcgtctctcccccatcctagcgccgcgccgcgtgctccctccgcacggtgagccgagccgctgacaagcgggtcccactcgggaccacgcgaggtgagcccggtccaccggctctctctctcctcccctcccgcgcgcgcgtgccttgggccgccttgggccggccggcccatttagctcggccgagccgccccttttctctcgggccgcgccctagccgtccgagggaagtgtaatttccctccctcttttcttttcttttcttttctttttcaaaaaggatttaattaaatccttttcctgtagaccaaaaatccaataatattagaaattcaatatcttcccaaccgtaaatccgtttgactccgttcaacttccaaaatccctcaaatcttaagatctatctaatggcatgcttagaggtcattaatagggctttattttcgccgtttgttgagttgtcccgttctgcgcgtagtttcggagcccgaagacccgcagtgcgaggatttcgaggatcaagctcaagatctcgagcaaggcaagccacctttgaacatttcgagcctatatttgaatttaatcatgttgcttgaaaaatattatgcattgataggatcgcacttaatctgtttgtcccgtctgcaaggcagattgtcggacctacctagtttgttgcatttgatccttcctttgttaattgttataccatgttcccttgtaaccacccagttgcgcctcgaaaatcgtgcactctgcacgagtatcgacgatcgccttcaaacttaaaatctgaaaaacttcttgggtaaaacttgggttttacaaaagacttggaaaacccgacacctgggtcggtgcttgcgaactaaatgaattttccaaaaccgcggaccggggaacgtaccgggtgtacggtttcccgctcttgcacttaaggaccgtttccttggaatttcatccaaacataagacaagtacgaccacatgggtggaatgggacacccctggctgagtaactagcttatcaggggagccttgatgccgagagacatgtggattcgccggggtggtgtcggggaggacccctgggtttcctggcacagtatggtctgggacctaatctgttgttggtctgggacccctctcgtcggcatatggtaaacctgtgtcggctttgaaaatgccttgtcatgaaagcttggaggtctcccgacgtggctgatccacacgggctgggtgatccgggttagtaatgtcgtgtgggtaaagtgtaccccctctgcagaggttaacaaactgttcgaacagccgtgcccacggtcatgggcggatgtgaggtgattcctagtgtagttttgtttgactactacttgtgaaattgctgttgtggaaaggggttcgatgtttaaaaaatctgcagctgatgggatcagctaggcccgggtggccatttgaaagttgttggcccgggtggccgtttgaaagttgttggccgggtgccaatcttgatcaattctaaagactgatacatttgcacatactccgaccggacgagacgcactgtctcatccatgttgtttgagaagcactcacttagttgctttcagaaaagagttcaaataaaatcaattgcaaaaacaacagcctttccttgaagcctgcattaaacacttatttcccatggcttgctgagtactcccgtactcacacttgctctatataaataatctcccccccagttgctgaagaagatgaagcggatcccgctgacgagaagttcttccaggagcaagccggctacgatgagttttagggtttcggcctagttcccaagtcgcgcctgtgttgtttggtccaagtcctggcttccgcttcccttttgtaatgcagttgtgagctcgggatctgtccacagcctgacttgattgtactcctactctataataaagagacctctgttgctgtgatattatgtcttcctgtgataccagcactgtttcctgggactggtatcgattaacaggttaatttggagcgtcacgggctagtttcggtcggtactagttcggggcgtgacaagttttcaactgtatgtgttcaggtgttcgattacatcagtgtttttgtcaaagctaattcaccttgctgttcatatctatccatccattataaaagatttgaaaatatttaacaagatataaatatgcgatatatcgcttcacaaacatgtaagtcaaaccaaaatacccaataagcataagcattagctctccctgaaaaggaggtgatctagccgcaccttccagtatggctaccttgttacgacttcactccagtcccaagcctagccttaggcatcccctccttacggcagtttattggctcgttcattcactcgctgggtaaggaggcagtgacttacaagatgtcgaagggaaagtagaacttcttcggtgcttgccgctactgccgcaaatcaactcaagctcctcgttccatcatgaaagagtaaagccccaaaataggtacacagcgtttgctattgcaataagggctgctcgcctttccttttgacggcttggcttcctatcgctcctatgtagtggtcggccttaaaagtatctttggacgaggtcctacggtaggtaagagcacgcacaagcacttgaccgaaggggaccaacgcttctactcctccaccgaggagctttttttaagaataccgagtcgggttcttctcctaccagtatcgaatagaacatgttgaacaagatcttcttcatggaaacctgctcaatttagattggtaaaatcgtacagattttgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgtttcattcttgcgaacgtactccccaagcgagatacttaacgcgttagctacaacactgcacgggtcgagtcgcacaacacctagtatccatcgtttacggctaggactactggggtcctgtccaagccaaagaacttacccccgaaaagtcctgacaaatgatgattgagacgagattccgcgtttttgaaccacgaaaggccaactttcataattaaacgctgtcactgtatggataactcttattgtgaaaagagctatttactctataatagataggtagagccaaagaatgtgaaccctttggaaggctgtgggcgatgagggattcgaacccccgacaccgtggttcgtagccacgtttcgactgtatataaattgcaattaaatttatagaattaaaagttaagagttgacaagatagattaaatataattatatttatggaatcaaaagttaaatagtgttgtacaataagtccaattagcatttccagcaacagcccctagccccctattgtaaagcctctaaaggtctaatgggggttgcccccatcttcagctacaaaccccatttcttaggctccatctctgtgtgtgtgtgttttagtacgcacattatatttatgtctagtttaacaccagaataattcaaacacgtagaattcaaccgtattcaaatttataattttgaataccataattcaaatttaaattcaaaattttcaacattgcaaaatgcataataaaattcaattttcacaatcacacacgtatgcaagttcacaagaattatatgatttttttaaaataacatatactacaaacatgaatggttcaatccggacaaccgactactagcgcgagacattgctagagttgctacgcatgaggtcaacgacctgcgacgtgtcagtgtggagatcacgtaggttgacgaacgacatcggacagggcaacgttggactatcctagcaagatggtgatcagataatagccggcggcacgacaaaagaaaagagggtagcaacacagtgagagcgcgagaacaacgggagaagcgcgcgctagggaattttcacacgcaccaaaaagaaaaagagatggggttgggtgtagagcctctaggattgagggctatggacagagatttcggtgcctttctattttaggggctttaatagcggtcctgccgtcctgctggatctcaatttttctcctttcaccccaaaaactatttaggggtttaattagtttaggggctctgctggagatgctgtctagtccgtgtaaatttgcacggcataatctgctagttgttcattatcctaaatatcaatcaaatgatatattttttttcagctaagcagatagggattgaggatgtgagcgagtgcccccacctttgtgcactagcttacggttatctgaagaagactgagggttatgaacaaaacctactcgcgttcttccataacaaaataaactcggacgctcttctcgtgctgttgattgaggagctagacaaatgtatactcggctacttctccttccattggaaatttgccactgaagtaatcacacaggtaggaaagatttactcatcccgtgttctgcattaccaatcaactgttagtccttgagatactctaaacactgaaatgttggagccacttaatttcttaggttctaacagcagagcagcctagaagaaagctcaaaaccatggtgttagaagccactaggtaaataatcatgctttattaatctggaatattttttgtaagaattaaccaggattgattctattgattttggtacaattatgatcaagaaagaatgaaatctggttcttaattgttttgtttcttccttttttggacaaaaagaaagatgaggtttgagagggtgtcaaggaagctgaaggtgacgaggctgttctccacgctggtggaggaactgaaggtcatcggggtcacctgcaacgacggccagctgcgcgacgccgacgccgacgtgatggtcccggcggctcaccgcgaccgcagcccggtcctgctcctgatgggcggtggcatgggcgccggcaagagcaccgtgctcaagcagatcatgaaggggtcagtccgttcgtccacttcgatcacggactcgagcaggcacgcgtgacgcggcgattgagctgaccaccaccgtggcgtacgtgcaaaatgcaggttgttctggtccggcgcggcggcgcacgccgtggtggtggaggcggacgcgttcaaggagtcggacgtcatctaccaggccatcagctcgcgcggccaccacaacgacatgctgcagacagccgagctggtatacgtaccacgcttgccctgaacctgctcaatcgtcagccggatcggtctgtgtgggtctggatgtgtctgacacgtacggtgtcgcgtgcgcaggtgcaccagtcgtcgatcgacgcggcggcgtcgctgctggtgacggcgctgaacgaggggcgggacgtgatcatggacggcacgctgtcgtgggagccgttcgtgctgcagacgatcgccatggcgcggtccgtgcaccggcagcggtaccggatgggcgtgggctacaaggtcgccgccgacggcaacgccaccgagcagtactgggagcccgtcgagggcgcccccgtgcccagcgggaggaggccctaccgaatcgagctcgtcggcatcatctgcgacgcctacctcgccgtcgtcagggggatcaggtaattaaccaaccaactacaattaacgtgttcacgcgcctgatcgagcctagctgacacgacacgatcgatcgatcgatctacccgtgcgttaggcgagccatcatatcggggcgagccgtgcgggtgagctcgcagctcaagtcgcacaagcggttcgccggctcgttccgcaagtactgcgacctcgtcgacagcgccagcctctacagcaccaacaccatcgccggcgcgaaggtattattcctaacccgttcaccgatcgattccccgtgtgatgataccgtgctgtgtgtttgagacgttgtacgcgtgcgtatatatgtgcgcgtgcagttgatcgggtggaaggacgtggggagcaggctgctggtggacgtggaggagatcgggctgctggacagggtgagcaggatcaacgaggaggccaacggcgtgcacgagctgtacccggacggccacccgacggacggcgccgggtcggtgtgggaggatctggtgtcgtcgccggccagggccgcgatacagcgggagctcagggaggccatcctcgatagcgaggcctgcttcccgtcgccgtaggctgcacagcagcaagaggctatgtaccgatgcagatttgttggttcgttcgttcacgttcgctcacgacacgatcgtactatacgtgtcgtggtgacgtagtaggtaggggtgatctctttgtttttccgtacaccaactctactgtttgatgatggtatcgacgttgactagtcgaccgatgccatccgtcggcgatggacttttcgggaatcgtgacatctgtcacgtgctgatgcgctgatggggccatcttacacaggcagccctcgacgcttagggccatcttccttgaagaggttagaaacgtattaggcctgaaaaggggcccgagtacagcgctgcaagagaaaagaaggtagcagcaacagcatttcggccctgtttcgctatttgaaatgcatgattttttttattttatttttgtgaggattgaaatgcaggattttttttactttggtcaaacattgacatcatactgtatctcacacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0774500, RefSeq:Os01g0774500