Os01g0775100

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0775100| Description = Plus-3 domain containing protein| Version = NM_001050941.1 GI:115440252 GeneID:4327159| Length = 5597 bp| Definitio...")
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Gene Name

Os01g0775100

Description

Plus-3 domain containing protein

Version

NM_001050941.1 GI:115440252 GeneID:4327159

Length

5597 bp

Definition

Oryza sativa Japonica Group Os01g0775100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34515003..34520599

Sequence Coding Region

34515413..34515520,34515673..34515764,34515881..34515996,34516643..34518557,34518625..34518745

Expression

GEO Profiles:Os01g0775100

Genome Context

<gbrowseImage1> name=NC_008394:34515003..34520599 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34515003..34520599 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtgatgaatgaagggaaagaaacgtctgacaacttctgtgtggataagctggagaaagaggacgaagtgggtagctgtcccacaagatactgcaacgatacttcccacagtctaggttcagcttccagaaaagaggtcatgcctattattgctgaaaaacaggctttctgtgcaactactgtccatgatgaaagatcttgggcagctaatgcttggcgtgctcgattagtaaaagcaattagtcagaaggactctgttttgccaaagaatgcagacaatatacattcaacttcggcctttgggagcattggtaatacagaaaacatgcctggcaaattgacaagtatgctaggtaatagaaatgacagtagccaagatcaggctatgcaggaaaagcataaggatgggcttattgttgctagatgtgagtccgtgtctgctgtgaatcctgttgctagatgtgagttagcatctggtgttaatcctttagcaagacatgagtcgacatccggttgtaatcctagaaagctcgagaaggggaaagaaaagcttatctatgatatgagtaattgtgttagcaacacaaatgaaggtgatgacagcaatgagagtatagagagctgcccaagtacaaaagctccgaagcggaagcatggtcaattttctgcagctgagatgacgtctggaaataaaagatgtagaagggaagataatgagagttcttgttcaggattattccacaaaaatgatagctctttctttaactggatgtcaactctcactaatggagtaaaggtgtttgatgaaactactgctgttccacttaatcagaagttttcagcagctacaggagaggaatttccaacaaaccctgtgccacttcaaaacaactgtggtgttccgctgcaatccgttggcttcaattctctttttcaatctctttatagtcagaatgttatgataacttcaagaaatacctgtcaccagtcagaaagcagttacaccgccaacaggctaacactgggtttcaagagtagcaaaccagttagcatgggcagagaaactcttaatgtggctactgagactttagctgcgggcagaattcaaatggattcttatggtgacagaggggcatttcaaaatcaaatgggaattttccctttaagagcagaaagaaatcagaatgggttccatggaagctcttcaaatgctgcatcgggacataaagatgatttctcagaaagcttatgggtaagtagacttttgccaaaaacacccatgaaagtgatggacacaacgcgctgtgatgaagaaactgatttttgttctgctaacccaaaaggtttaggtgatagttcatcaccgcaggattttaatgtggagaaggaattaaacaattcacaatactttactagcaaaggaagtgacaatgaaactacaagtagcaaatgtgcggcgcctcaagacgaaaataaaccatcagaaacaatggcatcaatttttgctaaaagattggatgcgcttagacatgcaaatacatcagcagtacatgtggccattacatgtgaccatggaacacccaaagggcgtaatcacaaaacaagttcttttgttgttagttacaatagtcatgatgagcaagaatctggacaaaaaactcacaagtcttctggtggagaaggaagaatagttttatggacaggtgacaaaggtaaggaacaattatctcctgggaatgacaaagaattaggagaaaaggttttgtctaagcatgaaaatcagaattgtgaagggagctctgatggaaaggtggtaccccctaaatgtaatttagaaacaaacacatatattgaagaaattgatcggaagagactacaaaataaagaaggagcaccaaattccatggagaatcagccagataacaaacaaatggtaccttatggtattgtgcccaatgatgtttatgacgaagcaagtgtagtttttggagccttgcagaggctccgtttgtctcgctccgatataataagatggatgaggtcaccagttatgcacaccaccttagatggctttttcttgcgtctacgatttggtaaatgggaggaagcattgggtggcactggatatcatgttgccaggataaatggagtactggataagaatcgcctttctgtgaccatcaggaattcaacttgccaagtagattctcgctttgtatccaaccatgacttccaccaggatgagctgaaggcatggtggtcagctgccatgaagagtggctggaaactgccttcgcaagaagaactcaatacgaagctacgagaaagagagctgcttcgtttttga</cdnaseq>

Protein Sequence

<aaseq>MDVMNEGKETSDNFCVDKLEKEDEVGSCPTRYCNDTSHSLGSAS RKEVMPIIAEKQAFCATTVHDERSWAANAWRARLVKAISQKDSVLPKNADNIHSTSAF GSIGNTENMPGKLTSMLGNRNDSSQDQAMQEKHKDGLIVARCESVSAVNPVARCELAS GVNPLARHESTSGCNPRKLEKGKEKLIYDMSNCVSNTNEGDDSNESIESCPSTKAPKR KHGQFSAAEMTSGNKRCRREDNESSCSGLFHKNDSSFFNWMSTLTNGVKVFDETTAVP LNQKFSAATGEEFPTNPVPLQNNCGVPLQSVGFNSLFQSLYSQNVMITSRNTCHQSES SYTANRLTLGFKSSKPVSMGRETLNVATETLAAGRIQMDSYGDRGAFQNQMGIFPLRA ERNQNGFHGSSSNAASGHKDDFSESLWVSRLLPKTPMKVMDTTRCDEETDFCSANPKG LGDSSSPQDFNVEKELNNSQYFTSKGSDNETTSSKCAAPQDENKPSETMASIFAKRLD ALRHANTSAVHVAITCDHGTPKGRNHKTSSFVVSYNSHDEQESGQKTHKSSGGEGRIV LWTGDKGKEQLSPGNDKELGEKVLSKHENQNCEGSSDGKVVPPKCNLETNTYIEEIDR KRLQNKEGAPNSMENQPDNKQMVPYGIVPNDVYDEASVVFGALQRLRLSRSDIIRWMR SPVMHTTLDGFFLRLRFGKWEEALGGTGYHVARINGVLDKNRLSVTIRNSTCQVDSRF VSNHDFHQDELKAWWSAAMKSGWKLPSQEELNTKLRERELLRF</aaseq>

Gene Sequence

<dnaseqindica>5080..5187#4836..4927#4604..4719#2043..3957#1855..1975#ccgcctcgcgttccgcggccggggggctcgcatgcaagcctagctagcttcacattcccttcccttccccgcattgctgcgagcgacgctgcttctgcttgcttggttcgcttggccgccgccagatgcgatcttctccttcctctccgatcctctccttggcctccttcctcccgttgctagctcgtgcatggtggcttcttcttcttcttgcgccggtttggtgatccttgttgcgccggtttggtggtgatccgatcgaggacggaggaggagcgcgcgggggatccggtgatgggagaaaagctgtgaaatgagatggtggtgatgcgctactccccgaggtgggctgctgcatcacagattgatgattgagtagaaatctattatactacgtcgtcttttcttgtagatggtttctttgtgctgtttaatctgctttttctgtagagctttagtttttattttattttatttttacatatcacgtagaaagattacaggcttttttttagaaggtgaaaaattgcaaattttttgaaagaacgaaaaattgcaaattgagcgtagatgcatttttttactctttatcttggtcgtctgatccatccacggattcgtttgggtctagctaagaccgaaaggtatcaagaagctgggaatatctgcttttttggacaaaaagacacaacaagattggagtttttgcatctactagttcatttattaggatagttcgattcttgcatatgagtggaaaagaacttataatagactagtcttgactcttgactatgactcttatcagttagatggatgcccaactgcgttgttattatacagcagtataagaaaaatatgtacttttgtcatttgtaggggaactctaatttataattactttctaccttgcatgtatgctatgatatgaacagaaaattttctttttgtttatctgttaatcttttcaaagggtcctatttgatatgctccagtgtaaaagaaaaacagactcatgccatatgtcctgcaaataatcctattatcttttagctaaaaaaaaaatcctcttatcttatagtctactgaaggcatatggtggcattcaggtgcaggtgtaaatgcagtcataatattcggcatgagatctgtctctgagctggtgtggtctccggatgagggtttgagcattaaaattgcagcgtccagcttaagtacaaggaaaacttctcttcattggaatgcagataccttgagcatagtaatatcttcacctcaacagagtggtgctggggagagtggtcatatcatagatgctacagtagaagacgcagaaaagatgccatcccagttacgaactcgcagtgacagttcagcgagagtattcatgtctagcccaagtagaataagaaacactgatgctcaacaatctacttctataagatcacatgggcaagattcaagtaagtttaaaagacatgaaggttttgagtagttcaaaggcagtttgttgatgctttgattttattggcctaaggatctgcatttatcagttgttgttcgtcttagcagcacaactttttcaggacaaatctaacaagagtactgaattaaatttttgaaaaaaaaaagagagaaggaaactgctgaattaacttttcaagaaaagtggagactgctgaaattagcataatcagcacaaattgtaaagcatctctactgattgtttgctatgggcatctgttacctattatccaaatagaataaaaatcttatgggttttccatttctttcattggatggccatttcctcacttaatgcctggcttaatacctgtagaatactgtggtgggatggatgtgatgaatgaagggaaagaaacgtctgacaacttctgtgtggataagctggagaaagaggacgaagtgggtagctgtcccacaagatactgcaacgatacttcccacagtctaggtaatcaattaagaaccatgctcttttcaattcctgacagtggagaccttaccgtagcattttacaggttcagcttccagaaaagaggtcatgcctattattgctgaaaaacaggctttctgtgcaactactgtccatgatgaaagatcttgggcagctaatgcttggcgtgctcgattagtaaaagcaattagtcagaaggactctgttttgccaaagaatgcagacaatatacattcaacttcggcctttgggagcattggtaatacagaaaacatgcctggcaaattgacaagtatgctaggtaatagaaatgacagtagccaagatcaggctatgcaggaaaagcataaggatgggcttattgttgctagatgtgagtccgtgtctgctgtgaatcctgttgctagatgtgagttagcatctggtgttaatcctttagcaagacatgagtcgacatccggttgtaatcctagaaagctcgagaaggggaaagaaaagcttatctatgatatgagtaattgtgttagcaacacaaatgaaggtgatgacagcaatgagagtatagagagctgcccaagtacaaaagctccgaagcggaagcatggtcaattttctgcagctgagatgacgtctggaaataaaagatgtagaagggaagataatgagagttcttgttcaggattattccacaaaaatgatagctctttctttaactggatgtcaactctcactaatggagtaaaggtgtttgatgaaactactgctgttccacttaatcagaagttttcagcagctacaggagaggaatttccaacaaaccctgtgccacttcaaaacaactgtggtgttccgctgcaatccgttggcttcaattctctttttcaatctctttatagtcagaatgttatgataacttcaagaaatacctgtcaccagtcagaaagcagttacaccgccaacaggctaacactgggtttcaagagtagcaaaccagttagcatgggcagagaaactcttaatgtggctactgagactttagctgcgggcagaattcaaatggattcttatggtgacagaggggcatttcaaaatcaaatgggaattttccctttaagagcagaaagaaatcagaatgggttccatggaagctcttcaaatgctgcatcgggacataaagatgatttctcagaaagcttatgggtaagtagacttttgccaaaaacacccatgaaagtgatggacacaacgcgctgtgatgaagaaactgatttttgttctgctaacccaaaaggtttaggtgatagttcatcaccgcaggattttaatgtggagaaggaattaaacaattcacaatactttactagcaaaggaagtgacaatgaaactacaagtagcaaatgtgcggcgcctcaagacgaaaataaaccatcagaaacaatggcatcaatttttgctaaaagattggatgcgcttagacatgcaaatacatcagcagtacatgtggccattacatgtgaccatggaacacccaaagggcgtaatcacaaaacaagttcttttgttgttagttacaatagtcatgatgagcaagaatctggacaaaaaactcacaagtcttctggtggagaaggaagaatagttttatggacaggtgacaaaggtaaggaacaattatctcctgggaatgacaaagaattaggagaaaaggttttgtctaagcatgaaaatcagaattgtgaagggagctctgatggaaaggtggtaccccctaaatgtaatttagaaacaaacacatatattgaagaaattgatcggaagagactacaaaataaagaaggagcaccaaattccatggagaatcagccagataacaaacaaatggtaccttatggtattgtgcccaatgatgtttatgacgaagcaagtgtagtttttggagccttgcagaggctccgtttgtctcgctccgatataataaggtactctaaaggattttacgtatcatctttgaattctggtacttaatcatttctaccttctatctaaatcatgaatgcttgggtttggagattccataacattttctacatttaaagaagggaacatcgaaagaatcacattaaggaatatttcattgggcaacagtaattctcatatagcttcatatggtagtctgctgtttttcagttatcaagtacttcataggggtgactgggaaaagtcaccgagctactgagcacataaaaaagttaccttctatgaaaaacgacatgtgtctcggctactataaagtagaatatgatacatctatttaaagtgaccattgctaatgagaaaatgaataatgagttgtaaaaaatgatacatatgccttacattcccctaggaagccaaaggtgccttaaaattaaaatagctttgagaaatattattgaaacagtgtctgtagtattagtaggtattttctctagtttaatactaatatcagtgtgttctggacttctgttcattgatcaaattaatatacataggggtatccctctctatgtaagtgatctccaagttagggaaaatcctgagaacctgatatttaattcatgtgtttgtactactatttcttgacagatggatgaggtcaccagttatgcacaccaccttagatggctttttcttgcgtctacgatttggtaaatgggaggaagcattgggtggcactggatatcatgttgccaggataaatggtaaatgactaaacaattgtgcataatatgttgcagaataatgtgttcctttcttttttaaaaaagaaaaaacaattagataaaaggaaaaggaagtgatatgccttctcttacaggagtactggataagaatcgcctttctgtgaccatcaggaattcaacttgccaagtagattctcgctttgtatccaaccatgacttccaccaggtaatgtatcaaaagatagtactgttgtccaagttgttatggaccacggaacaacaataaaaaaaattccaagtcaaatctttttttttcttggagggaattttattgtttataattcaaagtctaagataagtgaatctcatcttttctaggatgagctgaaggcatggtggtcagctgccatgaagagtggctggaaactgccttcgcaagaagaactcaatacgaagctacgagaaagagagctgcttcgtttttgaaacggaaaaggcacagacgccccagctccagatgacagatgccaacatcaattacagaggtttttctcttgcttgcctctggtctgaaaacgccagcgatgcaagcatcatcactaccggtcaggctaattaagttctgcactgtactgctgggattgctatccccacggttgatggtatattgagagagaaatcaggctgccgtttcgtgccgtggcgtaagcagcttgtattgtattttaagtacacgatttgacgatttgatttttacgatcggatgagcagttgcacgagttgttaactacttattgctcatcctatctgctgtaaataggaagctactaacagtcacagtgcagtgcaatcgtacaatttgtactactgctgctgctgaatataaatacttcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0775100, RefSeq:Os01g0775100