Os01g0776900

From RiceWiki
Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0776900| Description = Peptidase A1, pepsin family protein| Version = NM_001185657.1 GI:297720448 GeneID:9267579| Length = 4080 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0776900

Description

Peptidase A1, pepsin family protein

Version

NM_001185657.1 GI:297720448 GeneID:9267579

Length

4080 bp

Definition

Oryza sativa Japonica Group Os01g0776900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34642956..34647035

Sequence Coding Region

34642956..34643221,34645027..34645156,34645292..34645545,34646213..34646440,34646650..34646812
,34646931..34647035

Expression

GEO Profiles:Os01g0776900

Genome Context

<gbrowseImage1> name=NC_008394:34642956..34647035 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34642956..34647035 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaggccgccggagttcgcggcggtggcggcggtggcggtcgtcgccgcgctggtgctggcggctggggcgggcgcggcgccgttgccggcggcgctgaggctggagcgcgcgctgccgcacaagggggtggcggtggagcacctgagggagcgggacagggcgcggcacgggaggagggggctgctcgggggaggaggaggaggggtcgccggcgtggtggacttccccgtggagggctccgccaacccgttcatggtcgggctctattttacgcgtgtgaaattgggaagcccaccaaaagaatattttgtccagattgacactggcagtgacatcttatgggtagcgtgcagcccttgcaccggttgcccatcttcaagtgggctcaatatccagttggagttcttcaatcctgacacttcatcaacatcatccaaaataccatgctcagatgataggtgtacagctgcccttcaaacaagcgaagcagtctgccagacttcagacaacagcccatgtggttacactttcacgtatggtgatggaagtggcacatcaggttattacgtgtctgacacaatgtattttgacactgtcatgggaaatgagcaaactgccaattcttcagcctctattgtttttggatgtagcaactcacagtcaggagacttgacaaagacagacagggcagttgatgggatttttgggtttggacagcatcagctgtctgttgtctcacaactgaattctcttggggtatccccaaaggtgttctctcattgcctgaaaggttcagataatggtggtggtattctcgttcttggtgaaattgtcgagccaggattagtctatactccactcgtcccatcacagcctcattacaatttgaatctggaaagtatcgttgtcaatggacagaagctgccaattgattcctccttgtttacgacatcaaatacacaaggaacaattgtggactcaggaacaactttagcatatcttgcagatggggcatatgatccatttgttaatgcgataactgctgcagtctctccatctgtgcgctctcttgtcagcaaggggaaccaatgctttgtaacttccagcaggttagcttcttgtttcagtgaaggaaattag</cdnaseq>

Protein Sequence

<aaseq>MRRPPEFAAVAAVAVVAALVLAAGAGAAPLPAALRLERALPHKG VAVEHLRERDRARHGRRGLLGGGGGGVAGVVDFPVEGSANPFMVGLYFTRVKLGSPPK EYFVQIDTGSDILWVACSPCTGCPSSSGLNIQLEFFNPDTSSTSSKIPCSDDRCTAAL QTSEAVCQTSDNSPCGYTFTYGDGSGTSGYYVSDTMYFDTVMGNEQTANSSASIVFGC SNSQSGDLTKTDRAVDGIFGFGQHQLSVVSQLNSLGVSPKVFSHCLKGSDNGGGILVL GEIVEPGLVYTPLVPSQPHYNLNLESIVVNGQKLPIDSSLFTTSNTQGTIVDSGTTLA YLADGAYDPFVNAITAAVSPSVRSLVSKGNQCFVTSSRLASCFSEGN</aaseq>

Gene Sequence

<dnaseqindica>1..266#2072..2201#2337..2590#3258..3485#3695..3857#3976..4080#atgaggaggccgccggagttcgcggcggtggcggcggtggcggtcgtcgccgcgctggtgctggcggctggggcgggcgcggcgccgttgccggcggcgctgaggctggagcgcgcgctgccgcacaagggggtggcggtggagcacctgagggagcgggacagggcgcggcacgggaggagggggctgctcgggggaggaggaggaggggtcgccggcgtggtggacttccccgtggagggctccgccaacccgttcatggtcgggtgggtgagctgcctctcgctttcttttccctgtgttttgtatgggtgtggttgtgtgtgatcgagaaatttgggagttcttttcttcttctgggtttgttcgtctcggcgttgatctgaggttgttgcttctgctaaggtagattggtctcacgtatcgacaatggtagttcgttttcagggtggtggatggctgggttgttcgtgggcttttgttgcttcagttctttctgtttctcggatgaaggttcaaccctgatgaagtgtttatgcccttactcgacggtttcttgctgatgtttttttgtgtgcattctgaaaagtatcttctcgttctgttttgttcgaagttttggctttcttttttttttttttggccgaattgttcgtcgtagatggcggcggcttgttttctttcggattcttagattcgtttttgtccctttttcgatgcgacgattctgacttcgctctttctttatatgcattcaattgcttctcttgtttcaatgtcgatgctcaattgcttgttcattcgggagcccaattctgatgcagtgatgcgtttgcttgctccaattaaaataaaataaatgcattcatatgtaaagaaagagttcatttttcctttctgaaagaagaaagaattcatttattagcccgtaccttgcttctactggatcgagtgtttacagagatttggttgcccgtcacagtttcacttggccgcaatacctgctttctttcattttcctcgattgcttttacttaaggtcaattcctcttaggaaaaaaaagatatttatttgtcttagctgcggttaggaatttgtcaccctcagctatgatttaacttttgtttgtgtaatcaattcaaatttgtgcaacaccagttgtaagcttagtgacagggttatttagagatatcttagcaatagggagcgatatattatggactgctagacggaactttttaattgccccttgcgagccttaaaaggggagcaattatgtttcaccaatacctgtaggctttatatgctatcacaccttccatcatgctgaattccacttcatggttttgtgccataggctatagttagttagttaccatctgcaatctgtggtgttgatgaactcccttgaggtattggagtatcatgtgtttaaacctttactgatgggcggcaatttgtaaacatgctcatctttaagtgaatccttgaatttgttaggatgaacgtttcagtttgtttccaaatttagaaatgttatgtgattgcccaacctccgttttggaactatccttcaactagtagtggatactactttgtagagggaatttgagggatgcaatttttccataattatggatataatataacatctatacatgtattaacaatggttttgttaaaaatgacaaacatgactataactagttactactgatgggcagggtggattagtgtcatgctaatgtaaagatgatatcatatcatgattagggaagcatgctcgccaatgcagatagcaaaaaggggacgttcagcagggatggaaggactgaaaggatacatgtccttttgttgggttgggggattgtcagctgatggatataattttgaagatgacgtgactcaaccttggataatacatagagttatcaattgcagttagtgggttccaatcagaagaattgtaggactgatgccatttttcattttgcaatttggcttgttatttgaaattaggagacctttttgcaactactttatcctaattcctagtgtttgaatttgcaggctctattttacgcgtgtgaaattgggaagcccaccaaaagaatattttgtccagattgacactggcagtgacatcttatgggtagcgtgcagcccttgcaccggttgcccatcttcaagtgggctcaatgtgagacatctcattctttgcgctcttatccttatctctatgacatgcatacaacagcattgttatcccttgagatggacttacctatcagttgagattcattctgattggattattactttatatgtttttcagatccagttggagttcttcaatcctgacacttcatcaacatcatccaaaataccatgctcagatgataggtgtacagctgcccttcaaacaagcgaagcagtctgccagacttcagacaacagcccatgtggttacactttcacgtatggtgatggaagtggcacatcaggttattacgtgtctgacacaatgtattttgacactgtcatgggaaatgagcaaactgccaattcttcagcctctattgtttttgggtacagttcccttgaagccctgtatctttctaaattttacattagttaattttaaactgcaatcgacaactaaactgtgctttaaggatagtaagataccattagaaaccttgttagtgatgtggtccatttacatgttgacagtttgttgcacatgtgtgacaaagttggctctttttgctgattgagttggtacaaatgatggacctaatggcaacaaactcccaatgtccttaaaccaacagtcttcttgttacttttgcaagcaaacttcctttcaatatccttaatagtcaatctgaataaagttcttgtcatccctgaaaacagttgccaccagaaaaagttgtcaatatccttaatggtcaacctgaataaaattatatttatattttgctttccatgccattctggagcaaaagaaattcagcatgcttctagactactatcctctggcatgcatgcttcatcctgttaatggccttgttgttatgttaacaaaagcttagccttatgtggatcttttagcagtagaagcctggtgacactttgctgtaaagtttaactgtgcatttttttattttcattaccctaacagtgaactttgttgcttcgcatgatcagtattattcattgtctgatgaatatgttaattcttttgaaacagatgtagcaactcacagtcaggagacttgacaaagacagacagggcagttgatgggatttttgggtttggacagcatcagctgtctgttgtctcacaactgaattctcttggggtatccccaaaggtgttctctcattgcctgaaaggttcagataatggtggtggtattctcgttcttggtgaaattgtcgagccaggattagtctatactccactcgtcccatcacagtgagtctcttactagaattacttattgtataacttcagaattctgctgattttttgtttgtagaaaagttttcaaccaataagtgtatgcacattcattaaccttgcgtgagaggctaacaatattgctgcatgagtaacttgatattcttcctcctaatttctttctatggacgtcagtttatgatttatttttcaatgaaatataggcctcattacaatttgaatctggaaagtatcgttgtcaatggacagaagctgccaattgattcctccttgtttacgacatcaaatacacaaggaacaattgtggactcaggaacaactttagcatatcttgcagatggggcatatgatccatttgttaatgcggtgagcttcatagggcccacttatagttctattttctggaattccccatatatgataagcctacgatagtaattaatcttgttacatgattgttagtcctcatattttgtttttgcagataactgctgcagtctctccatctgtgcgctctcttgtcagcaaggggaaccaatgctttgtaacttccagcaggttagcttcttgtttcagtgaaggaaattag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0776900, RefSeq:Os01g0776900