Os01g0777000

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0777000| Description = Conserved hypothetical protein| Version = NM_001050954.1 GI:115440278 GeneID:4327897| Length = 5024 bp| Definition ...")
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Gene Name

Os01g0777000

Description

Conserved hypothetical protein

Version

NM_001050954.1 GI:115440278 GeneID:4327897

Length

5024 bp

Definition

Oryza sativa Japonica Group Os01g0777000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34625139..34630162

Sequence Coding Region

34625139..34627340,34627929..34628123,34628807..34629111,34629252..34629437,34629725..34629902
,34630136..34630162

Expression

GEO Profiles:Os01g0777000

Genome Context

<gbrowseImage1> name=NC_008394:34625139..34630162 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34625139..34630162 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgccgcggcagtctccggcggcggcgcggccgacgccgaggagctgttccgcacgagacgcatcccggagatccgcgcggcggagggcgccacgcgccgcgagatctccgccaaggaggaggagctccgccagctcgtcggccgcagctaccgcgacctcctcgactccgcggactcgatactcctcatcaagcagtcctccgacgccgtctccggcaacctctcccgcatctccgactccctcgcgtcgctcgcgccgccccccgaggctccccccgccgcatcgccctccccgtccggcgggcgggtccggctctacgcgtcggcggcgcgcgccaagtacctcgtcgacacccccgagcacatctgggggcggctcgacgagggcctgctcctggaggccgcggggcggtacgtgcgggcgcaggtggtgcacggcgtgctctcccgcgacgccgcggcggccgcgcggttcccgctgctcgcgcaccaggcgcagctggtggaggcgttccggccccagatcgcgcagcgcgctcgcgagcgcctcgccgaccgccgcctctccgtcgccgcccacgccgacgcgctcgcggccgctgcctcaatcgacgcaccgtcgctcaccccgacccaggcactccaactcttcctctcctcccgccgcgcctggatctcccaagccctaaccacccttgcctccgatctgacctcctactcctccgtgctgtgcgatgtcgccaagatcgtgcgtgtcacgctgggccatgtcgggcagttgtttgtgcttgcgctcaatgatttgccactgtttttcaagacggtgctcgatttgccgcccccttcacagctgttcggtggcattccagaccctgtggaagagacacggttgtggaaagaacactgggatcaacttgaggccaccatggtgctacttgagccagatgctgttgcaaggacttgtacagattggctgaagggatgctgtgatgagatttttggtgtgattgctggagggcaaagactagttgatgccattgagagtggggaagggcttggatcagtgcaaagacttgtgcgggaggcattagatgggagggaaggactggaagggactctggagcaatggctgaagagtgtgtttggatcagagattgaatcaccatgggatcagatccgtggcctcatcttgaaggaagggaaggacatttttgaggattggatggaagaagcctttgtgcaacggatgaaagacattgtgcacttggaattcggcagcttggatgatagtgtaaatattaagaaatcaattgatggtattggtgccaatgctgatccaaaggatgccggtgatttcatggtgtatttgcggaaagtttcaactggaggtggtgtctggttctctgagtctaagatcaagaaaggtggaattttggcacatttgaaaccgattgctgatgaaaatgatttccacagctgccttacctcatattttgggccagaagttagtcgcatcaggaatgcaattgacagcaaatgcaagactatccttgaggatctgttaagttttgtggactcgcacaattctgctcccagattgaaggagctggtgccatacctccaagagaaatgctataagaccatctctgggatactgaatggattggaagctgagcttggaaaattgtctgcttccttgagaaccaaaaaaggggagagcaatatgcttgcagcatctgttatcgtggagagatctctcttcattggccgcctcatgtttgcattgagataccactcgagtcatgtacccttgatcctaggatccccaaggcagtgggtaaaggaggctggtggtgcagcatttatgagattatcgtcgccctcaccaagacattcaagagcatcgtttgatacagcgatgccttttacccccaggaggcacacacagtcaagcccaaggagtcctggaaggcaattttctgacaaccccagaagacaaactattgctgctgctgcttccctatttggtgctgatgatagctccaatcccagacttgatgaactaaacaagaccttacaggcactctgcattgcagcccatggattgtggatagcatggttgtccactgaattatcacagcttctctcatatgacctcaacaaagatgattcattgtccttatcaacccctttacggggatgggaagtcacagtcatcaaacaagaggaatccactgagggccccttggagatgcaaatagcacttccatcaatgccttcactgtacattatatcctttctttatcaagcatgtttggagattcataaaattggagggcacatcctggacaaatctatattgcaaaactttgcatgggacttgttacagaaggttattgatatctatgaaagctttttggtatcaatcgagtctggtaaatctctggtttcagaaaagggggttctgcaaatactgctcgatttgcgcttcattggcgatgttctgtcaggaggcaaaagttcttccaccaaaactactgaaacacagagaacacatgactcttcgccaagcgccattgctaagacttccttcaggagaaaacagtcacaattgcaggcagattcagctaccatagagcctataaacaagctgatcaataagttctcacagagattggatccgatagactgggctacgtacgaaccttatctgtgggagaatgagaagcaatcttacaagcgctatgttgttcttttcggcttcttggttcaactgaatcacatgtatactggaactgtgcaaaagttaccgactaaatcaaatacagattcaaacattatgaggtgctcccaagtcccaagattcaaatacctaccgatcagtgccccagctctatcatcaagagcacacaaatcatcattacagtcaacatccgatgattccacatctagaagcccttggaaatcatattcaaatggagaaagatctacggcatcagaatttgatgataatgttagccttggaggtgctgctccattgctcaagtcatttgttacccagatatccaatcctaaccatgaatggtaa</cdnaseq>

Protein Sequence

<aaseq>MPAAAVSGGGAADAEELFRTRRIPEIRAAEGATRREISAKEEEL RQLVGRSYRDLLDSADSILLIKQSSDAVSGNLSRISDSLASLAPPPEAPPAASPSPSG GRVRLYASAARAKYLVDTPEHIWGRLDEGLLLEAAGRYVRAQVVHGVLSRDAAAAARF PLLAHQAQLVEAFRPQIAQRARERLADRRLSVAAHADALAAAASIDAPSLTPTQALQL FLSSRRAWISQALTTLASDLTSYSSVLCDVAKIVRVTLGHVGQLFVLALNDLPLFFKT VLDLPPPSQLFGGIPDPVEETRLWKEHWDQLEATMVLLEPDAVARTCTDWLKGCCDEI FGVIAGGQRLVDAIESGEGLGSVQRLVREALDGREGLEGTLEQWLKSVFGSEIESPWD QIRGLILKEGKDIFEDWMEEAFVQRMKDIVHLEFGSLDDSVNIKKSIDGIGANADPKD AGDFMVYLRKVSTGGGVWFSESKIKKGGILAHLKPIADENDFHSCLTSYFGPEVSRIR NAIDSKCKTILEDLLSFVDSHNSAPRLKELVPYLQEKCYKTISGILNGLEAELGKLSA SLRTKKGESNMLAASVIVERSLFIGRLMFALRYHSSHVPLILGSPRQWVKEAGGAAFM RLSSPSPRHSRASFDTAMPFTPRRHTQSSPRSPGRQFSDNPRRQTIAAAASLFGADDS SNPRLDELNKTLQALCIAAHGLWIAWLSTELSQLLSYDLNKDDSLSLSTPLRGWEVTV IKQEESTEGPLEMQIALPSMPSLYIISFLYQACLEIHKIGGHILDKSILQNFAWDLLQ KVIDIYESFLVSIESGKSLVSEKGVLQILLDLRFIGDVLSGGKSSSTKTTETQRTHDS SPSAIAKTSFRRKQSQLQADSATIEPINKLINKFSQRLDPIDWATYEPYLWENEKQSY KRYVVLFGFLVQLNHMYTGTVQKLPTKSNTDSNIMRCSQVPRFKYLPISAPALSSRAH KSSLQSTSDDSTSRSPWKSYSNGERSTASEFDDNVSLGGAAPLLKSFVTQISNPNHEW </aaseq>

Gene Sequence

<dnaseqindica>1..2202#2791..2985#3669..3973#4114..4299#4587..4764#4998..5024#atgcctgccgcggcagtctccggcggcggcgcggccgacgccgaggagctgttccgcacgagacgcatcccggagatccgcgcggcggagggcgccacgcgccgcgagatctccgccaaggaggaggagctccgccagctcgtcggccgcagctaccgcgacctcctcgactccgcggactcgatactcctcatcaagcagtcctccgacgccgtctccggcaacctctcccgcatctccgactccctcgcgtcgctcgcgccgccccccgaggctccccccgccgcatcgccctccccgtccggcgggcgggtccggctctacgcgtcggcggcgcgcgccaagtacctcgtcgacacccccgagcacatctgggggcggctcgacgagggcctgctcctggaggccgcggggcggtacgtgcgggcgcaggtggtgcacggcgtgctctcccgcgacgccgcggcggccgcgcggttcccgctgctcgcgcaccaggcgcagctggtggaggcgttccggccccagatcgcgcagcgcgctcgcgagcgcctcgccgaccgccgcctctccgtcgccgcccacgccgacgcgctcgcggccgctgcctcaatcgacgcaccgtcgctcaccccgacccaggcactccaactcttcctctcctcccgccgcgcctggatctcccaagccctaaccacccttgcctccgatctgacctcctactcctccgtgctgtgcgatgtcgccaagatcgtgcgtgtcacgctgggccatgtcgggcagttgtttgtgcttgcgctcaatgatttgccactgtttttcaagacggtgctcgatttgccgcccccttcacagctgttcggtggcattccagaccctgtggaagagacacggttgtggaaagaacactgggatcaacttgaggccaccatggtgctacttgagccagatgctgttgcaaggacttgtacagattggctgaagggatgctgtgatgagatttttggtgtgattgctggagggcaaagactagttgatgccattgagagtggggaagggcttggatcagtgcaaagacttgtgcgggaggcattagatgggagggaaggactggaagggactctggagcaatggctgaagagtgtgtttggatcagagattgaatcaccatgggatcagatccgtggcctcatcttgaaggaagggaaggacatttttgaggattggatggaagaagcctttgtgcaacggatgaaagacattgtgcacttggaattcggcagcttggatgatagtgtaaatattaagaaatcaattgatggtattggtgccaatgctgatccaaaggatgccggtgatttcatggtgtatttgcggaaagtttcaactggaggtggtgtctggttctctgagtctaagatcaagaaaggtggaattttggcacatttgaaaccgattgctgatgaaaatgatttccacagctgccttacctcatattttgggccagaagttagtcgcatcaggaatgcaattgacagcaaatgcaagactatccttgaggatctgttaagttttgtggactcgcacaattctgctcccagattgaaggagctggtgccatacctccaagagaaatgctataagaccatctctgggatactgaatggattggaagctgagcttggaaaattgtctgcttccttgagaaccaaaaaaggggagagcaatatgcttgcagcatctgttatcgtggagagatctctcttcattggccgcctcatgtttgcattgagataccactcgagtcatgtacccttgatcctaggatccccaaggcagtgggtaaaggaggctggtggtgcagcatttatgagattatcgtcgccctcaccaagacattcaagagcatcgtttgatacagcgatgccttttacccccaggaggcacacacagtcaagcccaaggagtcctggaaggcaattttctgacaaccccagaagacaaactattgctgctgctgcttccctatttggtgctgatgatagctccaatcccagacttgatgaactaaacaagaccttacaggcactctgcattgcagcccatggattgtggatagcatggttgtccactgaattatcacagcttctctcatatgacctcaacaaagatgattcattgtccttatcaacccctttacgggtacgctccatgtccctcttatctttccaattgttatctttccaacccctttacgggtaaaaggcattctaagtatatttcttactgctgtttctgattctgtccatgttattcatactatcaatcggggatgcttttgtttgctaggtaacaaagacatctgctatatacagcaatattagtaacataatgatgaaatctgtaataattttggatcatgttggacatgactgagcagctagaagacatttctcttttattaagtgcccttatgatttacaaagaacttgttgaataaaatcgtgggcctgtagagtttgtttttgcctattggaatgccaattttgaagttatctattataggatattcgatagagctatacttactggctcaccttttctagggttgaccaagcagctaaccccaagttttgattctagtttttgtgcttcgatttttgtctatattcaaatattaaattctgactatgtgtttcaacgttgatttctagtcctatcatgctattttaatgccaaaataaacatggcatgctgattgtcatagacatgatatatgtgccttgtcagggatgggaagtcacagtcatcaaacaagaggaatccactgagggccccttggagatgcaaatagcacttccatcaatgccttcactgtacattatatcctttctttatcaagcatgtttggagattcataaaattggagggcacatcctggacaaatctatattgcaaaactttgcatgggacttgttacagaaggtaatgttctttcatgacaaccttttcttctttgagggggtgacgagaagtaattgtggtgcatgttataggctaaaacattggcctggaacttctagcaaagaatggaagaaccaaagaatgttttatcatgctatctgcatgaaacacaactagctatagttcactttcatgtgtttttgcctttgtataaatttgaccataccgtaatgatgatcaacaatagatactacgagggaaccatttgtttatgttatatgtgcaatagttgctattggcaaaatgtaatgactgttctacaattcattactactatgattgatagtaattatagagttataagttaatcaagcttttcagcttttgttgtttttcttataatcaagcattgattaagctgggcactatagtcttcagtttacctgcacacgcctacaaaaattaataccgtgccctaataatataatgtcatggaccttattaacctgaatgcctcgcccttccaactgtcatcaatatttcaattttgagaacctccgaggaactagctgttgtatgtgttgctttattaacaattatctgttttgtctacctgcattgatgaagattaggagaaaatgttcagtgtatgatttaaaagccaatataatcactgaacctaacagctacttaaattcgtgcaggttattgatatctatgaaagctttttggtatcaatcgagtctggtaaatctctggtttcagaaaagggggttctgcaaatactgctcgatttgcgcttcattggcgatgttctgtcaggaggcaaaagttcttccaccaaaactactgaaacacagagaacacatgactcttcgccaagcgccattgctaagacttccttcaggagaaaacagtcacaattgcaggcagattcagctaccatagagcctataaacaagctgatcaataagttctcacagagattggatccgatagactgggctacgtaagcactatcctctgttttactttgttatacatatcaccacataattcaatagctgaatgcatgatcaatagtctttatagacaaaaacccatgctccatatttgtccatgatgaagcatttgcttattttgaaacaggtacgaaccttatctgtgggagaatgagaagcaatcttacaagcgctatgttgttcttttcggcttcttggttcaactgaatcacatgtatactggaactgtgcaaaagttaccgactaaatcaaatacagattcaaacattatgaggtgctcccaagtcccaagattcaaatacctaccgatcaggtaaataattcttcagactgagtacacatacattttatcgtcgtataatgcatatttctgtaattaatccattaaggtcattagttttagacagctatagtgtttaaattcatgcttaaaatacttgatgagatgatattattggacagccatatgtgatgttttttagcctggtgtgaaagttgattttcaaagaaacctttgtaagtagcgttggctggttctgatgaaaaattacactagtttgtagatctaataggtctcatgttcatatgtttcacttgtagtgccccagctctatcatcaagagcacacaaatcatcattacagtcaacatccgatgattccacatctagaagcccttggaaatcatattcaaatggagaaagatctacggcatcagaatttgatgataatgttagccttggaggtgctgctccattgctcaagtcatttgttacccaggtgagtaacctactgcatatttttagtttactagtaatagtgcacgtgcaaggcacattcttgcaagggcatgttcatacatacactgagttcagaaacatggcaagggtatgtccaacactaaattcagatgcattccatatccacgttcagacaataatatggatcttacctggcaatccaagccggttaagtatgaacttatataatatgaattcagtatgaacttgcagatatccaatcctaaccatgaatggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0777000, RefSeq:Os01g0777000