Os10g0510000

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0510000| Description = actin [Oryza sativa (japonica cultivar-group)]| Version = NM_001071569.1 GI:115482881 GeneID:4349087| Length = 3814 ...")
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Gene Name

Os10g0510000

Description

actin [Oryza sativa (japonica cultivar-group)]

Version

NM_001071569.1 GI:115482881 GeneID:4349087

Length

3814 bp

Definition

Oryza sativa Japonica Group Os10g0510000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20062289..20066102

Sequence Coding Region

20064055..20064114,20064228..20064621,20064890..20065503,20065599..20065664

Expression

GEO Profiles:Os10g0510000

Genome Context

<gbrowseImage1> name=NC_008403:20062289..20066102 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20062289..20066102 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacgcagaggacattcagccccttgtctgtgacaatggaaccggaatggtcaaggctgggtttgctggagatgatgctccccgtgctgttttcccgagtattgttggccgtccgcgacatacaggcgttatggttgggatgggacaaaaagatgcttatgtcggtgatgaggcccaatccaagaggggtatcctaaccttgaaataccccattgagcatggaattgtaagcaactgggatgacatggagaaaatttggcaccacacattctacaatgagcttcgtgtagcaccagaagagcatccaattcttcttacggaggctccacttaaccctaaggccaacagggagaagatgacacaaattatgtttgagacattcagcgttccagccatgtatgtcgctattcaagccgtgctttccctctatgctagtggacgtactactggtattgtcttggattctggagatggtgtcagtcacacagtcccaatctacgaaggttatgcccttccgcatgccattctccgtcttgatcttgctggtagggatctgactgattccctcatgaagatcctgactgagaggggttactcattcaccacctctgccgagcgggaaattgtccgtgacatcaaggaaaagcttgcatacgtcgctcttgactacgagcaggagcttgagactgcaaagagcagctcatcagttgagaagagctatgagctgcccgatggacaggtgatcaccattggcgcggagcgcttcagatgcccagaggtcatgttccagccttctctcatcggcatggaagctccaggcatccacgagacgacatacaactccatcatgaagtgcgatgttgatatcagaaaggacctgtatggtaacattgttctcagtggtggatccaccatgttccctggcatcgcggaccgcatgagcaaggagatcaccgcgctcgcgccaagcagcatgaagatcaaggttgtcgctccgccagagaggaagtacagtgtctggattggaggatcaatccttgcatctctgagcaccttccagcagatgtggatctcaagggctgagtatgaagaatctggcccagctatcgtccacaggaagtgcttctag</cdnaseq>

Protein Sequence

<aaseq>MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE HPILLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDG VSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKL AYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGI HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP PERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF</aaseq>

Gene Sequence

<dnaseqindica>1767..1826#1940..2333#2602..3215#3311..3376#tcgcctccttcttgctgccgccgccatccccggttcggttctctcctcttctttaggtgagcaactgcctctccatgtccaggccctcccggaccctgcttgctttctgttttaatgcttgatgtttcttgcaatcggagatgtgttctagttctgttagatgggtgaactactgaactgagttgctgaagtaggtgtggctggttgcttttgcttgtgtgttgtcaaatgttggatccgttggactgtaggagttcagggatgcgcgtatactggttgtttgttgttcttggtgaatgctgatccgatccattgctttagttgatggatgtatccgatcttgtttgtgctgaggtgacgagtagtcttgcagtagatctcttcgtgtttatgttgtgttgtgctaaggtcttgtagttcccaaaattttttcccaaaaatgtcacatggaatctttagacacatgaatggagcattaaatatagattaaaaaaactaattgcacagtttgcatggaaatcgtgagaccaatcttttgagcctaattagttcatgattagccataagtgctacagtaacccacatgtgctaatgatggattaattaggcttaataaattcgtctctcagtttctaggcgagctatgaaattacttttttttattcgtgtccgaaaaccccttccgacatccggttaaacgtcggatgtgacaccaaaaaattttcttttcgcgaactaaacaaggcctaaggcgtgaagttgggggtatagtttctctgaattgtagatcaactgacagactttcgcatgctcatagccggtttgtttgcggtactcaagaaactgtcttgattggtcattccgtaggtggggacttgtgaaaaagctgattcctttcttttcatttccacggttgctttcttgttggcgtgggaaaaaaacagttttcagtactgtaccgatcgactttcttttgagacttttttctcctcaacaaaacatttcatagttcacacaaaaacacaagcataccaacgatttcattatgtgacatggcttctaaaatctgaattaaagaagcaagttgcttaactgaaaactgcctagtttcagaaatcatggagtttaaattttgtactaaaaaatgtatgcttatggaccactattctaagatgcttcacatcttgatgacggctgtctgatcagaaaaaaaataatgcttcagatcaaccaatcagacaatccaggatatgagcagatcatgttgcattcatttcatccactgaagcatgtcccttttttctccctgaagattggtctaaatcgattcaaatacacattgcattgtatgctcttaggagagagcaccattcctttggagggttggtgattcagaccagcctcggttgattgatttgaatttcttaactacaagtcacttgatctagttataatttacgcatcatggaccattcattttgggagtttcctatatacaactaaagtgttatacttcttcctatctgcgccttcctttttgtttgaataatcctccctctttcacaatttgcaatactagttagtcaattaatagctttgaatgtgatatcttaaagacatgtattttgtcattcatgtttgatgaagactcgtgtttttgtaggatgaatgtttagttcaagttacatttttctgtattaatctatagtctttgtaaacactgttttgaatgatttattttgtgttatgcagatcagttaaaataaatggctgacgcagaggacattcagccccttgtctgtgacaatggaaccggaatggtcaaggtaataaaaagtgatgacttggcatcgcattgttgaacaaaatttctacctgatggtaattattgttacaattgagaagctcatcaagtattaactgttttcatttttcataggctgggtttgctggagatgatgctccccgtgctgttttcccgagtattgttggccgtccgcgacatacaggcgttatggttgggatgggacaaaaagatgcttatgtcggtgatgaggcccaatccaagaggggtatcctaaccttgaaataccccattgagcatggaattgtaagcaactgggatgacatggagaaaatttggcaccacacattctacaatgagcttcgtgtagcaccagaagagcatccaattcttcttacggaggctccacttaaccctaaggccaacagggagaagatgacacaaattatgtttgagacattcagcgttccagccatgtatgtcgctattcaagccgtgctttccctctatgctagtggacgtactactggtaagtgaacaaagaataagcattttcatttgtaaattctgttttgctactctggaatctcaatagagcaggaacaaaccgggtgatgttcaaatcaaatgctatgctcacaaccaaaattagcaatatattgtctaaagtaaacttaaattgaaccattcaaaccaaataaaatttaagttactgccttgttttacagatgttacaatacacaaaaactgtcattatgttctctcgtaatttgtttcttgatattttttgtcaataggtattgtcttggattctggagatggtgtcagtcacacagtcccaatctacgaaggttatgcccttccgcatgccattctccgtcttgatcttgctggtagggatctgactgattccctcatgaagatcctgactgagaggggttactcattcaccacctctgccgagcgggaaattgtccgtgacatcaaggaaaagcttgcatacgtcgctcttgactacgagcaggagcttgagactgcaaagagcagctcatcagttgagaagagctatgagctgcccgatggacaggtgatcaccattggcgcggagcgcttcagatgcccagaggtcatgttccagccttctctcatcggcatggaagctccaggcatccacgagacgacatacaactccatcatgaagtgcgatgttgatatcagaaaggacctgtatggtaacattgttctcagtggtggatccaccatgttccctggcatcgcggaccgcatgagcaaggagatcaccgcgctcgcgccaagcagcatgaagatcaaggttgtcgctccgccagagaggaagtacagtgtctggattggaggatcaatccttgcatctctgagcaccttccagcaggtaatgcaaaatcatccaacagttaattcttgatacactttctagattgttcgagaaggttcttgacatatgtttctttccttttttttgtgcagatgtggatctcaagggctgagtatgaagaatctggcccagctatcgtccacaggaagtgcttctagatgtggcctagctgtatctttcatgagaaccccttgtctattagcattagctggctgtttcatggacaaaaaaattgttgggtctgatggcttgtctatgggtgtatctactctgattagctccggtttttgtgtatgccaatataattattccgtaagtacgtggggagtcaagaacattatgtgtgtagtttgatttcataaattgatttgagattcttgaacttttctagtaccgcaactgctagtctgcaaccttgcaatgttcatcctctttgtcatgagcttgtactacttgaagatactatgcccctgtttggggaggtcgagattttaagaagtagctagctagtgaaaatatgaaaatgctaggattcccaaattgtagctttttgttcattttcagggttatataattacatattctcaaattgtcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0510000, RefSeq:Os10g0510000