Os01g0780600

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0780600| Description = Conserved hypothetical protein| Version = NM_001050973.1 GI:115440316 GeneID:4327837| Length = 3109 bp| Definition ...")
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Gene Name

Os01g0780600

Description

Conserved hypothetical protein

Version

NM_001050973.1 GI:115440316 GeneID:4327837

Length

3109 bp

Definition

Oryza sativa Japonica Group Os01g0780600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34820572..34823680

Sequence Coding Region

34821029..34821285,34821386..34822406

Expression

GEO Profiles:Os01g0780600

Genome Context

<gbrowseImage1> name=NC_008394:34820572..34823680 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34820572..34823680 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgagggcgtgctccccaccgccgaggacctccacatcgtctcccgctgcatcaccgcgctcgcctccaaggcctgcgcctccgacgccgccgcgtgttccaccggccacgccgccgcctccgcctccgccgtggccgtggccgccaagaatgccagctacgacgcgctgtggaatggcatcggctcggggggcacgccacggggcgggggcggcgcagcgggcgcggcggcggggtgctccgggatggactggtggtacgaggacgtgtcgttcctgagcctgcccatgttcaagcgactgatccaggcgatggaggggaaggggatgcgccccgagagcatcgccggcgcgatcatgttctacgcggggcggttcctgcccgggctgaagcggaacaccagcttcagcaacgccagcttcggcggcgactgcggcgccggcagccgcagcatcacgccgcgcgccgccaacgtgtcggcgccgtcggagggcgaccagaggtacttcctggaggagatcgtggcgctgctgccggcgaagaagggcgtcgcctccaccaggttcctgctcgggatgctccgcacggcgatgctcctccacgccagcccgctgtgccgggagaacctggaacggcggatcggcgcgcagctggaggacgcctgcctcgacgacctgctcgtcccaaacctcggctacaccgtcgagacgctctacgacatcgactgcgtgcagaggatactggactacttcatgtcgtccacggacgggctcgggaccgggtacacgtcgccggcggtggtggaggagggcagccagcttggggcgctccatgccgggagcccctcgtcgctgtcgccgatcaccatggttgccaagctcatggacgggtaccttgccgaggtggcgcccgacaccaacctcaagctgcccaagttccaggcgctcgccgccgtcgtacccgactacgcgcgccccgtcgacgacggcatctaccgcgccatggacatatacctcaagtcgcacccgtggctgtcggagtcggagagggagcagctgtgcaggctgatgaactgccagaagctgtcgctggaggcgtgcacgcacgcggcgcagaacgagcgcctgccgctgcgggtggtggtgcaggtgctcttcttcgagcagctccgcctccgcacgtccatcgcaggctggttcttcgtgtccggcaacgcggcggcgggcggcgacggcgctccgcagccgcacccggggggcagcgccatcgtgcctaa</cdnaseq>

Protein Sequence

<aaseq>MRGRAPHRRGPPHRLPLHHRARLQGLRLRRRRVFHRPRRRLRLR RGRGRQECQLRRAVEWHRLGGHATGRGRRSGRGGGVLRDGLVVRGRVVPEPAHVQATD PGDGGEGDAPREHRRRDHVLRGAVPARAEAEHQLQQRQLRRRLRRRQPQHHAARRQRV GAVGGRPEVLPGGDRGAAAGEEGRRLHQVPARDAPHGDAPPRQPAVPGEPGTADRRAA GGRLPRRPARPKPRLHRRDALRHRLRAEDTGLLHVVHGRARDRVHVAGGGGGGQPAWG APCREPLVAVADHHGCQAHGRVPCRGGARHQPQAAQVPGARRRRTRLRAPRRRRHLPR HGHIPQVAPVAVGVGEGAAVQADELPEAVAGGVHARGAERAPAAAGGGAGALLRAAPP PHVHRRLVLRVRQRGGGRRRRSAAAPGGQRHRA</aaseq>

Gene Sequence

<dnaseqindica>2396..2652#1275..2295#ttccgttttctcctaaacataactgcgtagcaggcagatctcgtcggcatcttgttccagtttgacagttacagtacagatcgacgtgtagaataactgggagaaggaagaagacgatggcgactatgaagttgggctccaagccggaaatctttgttctggaaggcctcacatggttatcctgaattcctcgtttctttctgttgtgttaattttctgtatgttgaatttatttttttttctagttcagaattctcttaaaggatctctatcatatgttgagtttaagagatctgatagttgatgttcatttactaaccatatcagtaatcagtatgtcaactagtgctttaaaaccatgggtacttctgtgacagattgtatggagatgcgtaggttctcaaacaatgtaaaacacaatcaaattaatttctgcaccgtaacgtaacaacagattgagtttcacgcatgaactatgtcattcccaacctctgatccatgttgttcactggcaaatcggctggaaatctttcatggcacagtatgttcatctgtttgatataacacattcacgtcccaaactcccatgcacgcacataggtcgattcagattatccctcattgctaatctatacacgtcaattccaaacgcttacattctgtttgatataacacattcacgtcctaaactcccatgcacatactaggtcgattcagattatccctcattgctaatctatacacgtcaattccaaatacatgcttaatcttaatcttgtcaatcgccaggagatgcatgacggagctggagagtgatgtcgtcgtggaagtaggagaaatgtcattttacctccacaaggttagcgcaattattctctaaactaatcaccgtgaattaaaatatcttgaattgcattgagctggcctggtcgagctgacgtgtagcagttcccgctgctgagccggagcggtgtgctgcagcggatgatcagcgagtaccaagcgccgcaggaggacggcggcggcggcggaggcatgtgcacgctgcagctggacgacatcccggggggcgccaaggcgttcgagctggcggcgaggttctgctacgacgtcaagatcgagctcaacgcgcacaacgtggtgtgcctccggtgcgccgccgagtacctgcggatgaccgacgactacgccgagggcaacctcatcacgcaggcggagtccttcctcgccgacgtgctcgccaactggaaggactccatcaaggcgctcgagacatgcgagggcgtgctccccaccgccgaggacctccacatcgtctcccgctgcatcaccgcgctcgcctccaaggcctgcgcctccgacgccgccgcgtgttccaccggccacgccgccgcctccgcctccgccgtggccgtggccgccaagaatgccagctacgacgcgctgtggaatggcatcggctcggggggcacgccacggggcgggggcggcgcagcgggcgcggcggcggggtgctccgggatggactggtggtacgaggacgtgtcgttcctgagcctgcccatgttcaagcgactgatccaggcgatggaggggaaggggatgcgccccgagagcatcgccggcgcgatcatgttctacgcggggcggttcctgcccgggctgaagcggaacaccagcttcagcaacgccagcttcggcggcgactgcggcgccggcagccgcagcatcacgccgcgcgccgccaacgtgtcggcgccgtcggagggcgaccagaggtacttcctggaggagatcgtggcgctgctgccggcgaagaagggcgtcgcctccaccaggttcctgctcgggatgctccgcacggcgatgctcctccacgccagcccgctgtgccgggagaacctggaacggcggatcggcgcgcagctggaggacgcctgcctcgacgacctgctcgtcccaaacctcggctacaccgtcgagacgctctacgacatcgactgcgtgcagaggatactggactacttcatgtcgtccacggacgggctcgggaccgggtacacgtcgccggcggtggtggaggagggcagccagcttggggcgctccatgccgggagcccctcgtcgctgtcgccgatcaccatggttgccaagctcatggacgggtaccttgccgaggtggcgcccgacaccaacctcaagctgcccaagttccaggcgctcgccgccgtcgtacccgactacgcgcgccccgtcgacgacggcatctaccgcgccatggacatatacctcaaggtgatcacacacgtcgctctatctagctagctgcattgcatttcgatttcatctcgtgatcaacacacgtacgatgatgatacggcgtccatgcacgcagtcgcacccgtggctgtcggagtcggagagggagcagctgtgcaggctgatgaactgccagaagctgtcgctggaggcgtgcacgcacgcggcgcagaacgagcgcctgccgctgcgggtggtggtgcaggtgctcttcttcgagcagctccgcctccgcacgtccatcgcaggctggttcttcgtgtccggcaacgcggcggcgggcggcgacggcgctccgcagccgcacccggggggcagcgccatcgtgcctaagggcgcggcggcggccgggcagtccgacgccgacgcggaggccgacgaggggaaggggaaggagctccccgccgaggccatcaccgacgtgaaggcgagggtgtcggagctggagaaggagtgcatgagcatgaagcaggagatccggcggctggggaagccgaggagatcgtggagcctcctcaccaggaagtgcaggttcgggaccaaggtgcagcaagcgcagcccaccatgagcagcaaatgagaggcgcctcacgccctgcctgcttcctgcctaacccaagtatgaaatcagtacaagtactaatcccttcaattttgatcctatagtctctgagctttgctgtaccgagctagttaatgaaatgcaataagatgcttatgtttcataggataataagctagttttaggccttgaacagagtccttcaatatgtactgtcatttctgatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0780600, RefSeq:Os01g0780600