IC4R008-GWAS-2016-27228161

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Project Title

  • Genome-Wide Association Study for Traits Related to Plant and Grain Morphology, and Root Architecture in Temperate Rice Accessions

The Background of This Project

  • In this study the researchers carried out a genome-wide association analysis for plant and grain morphology and root architecture in a unique panel of temperate rice accessions adapted to European pedo-climatic conditions. This is the first study to assess the association of selected phenotypic traits to specific genomic regions in the narrow genetic pool of temperate japonica. A set of 391 rice accessions were GBS-genotyped yielding—after data editing—57000 polymorphic and informative SNPS, among which 54% were in genic regions.

Plant Culture & Treatment

Research Findings

Labs working on this Project

  • PTP Science Park, 26900 Lodi, Italy
  • IBBA-CNR, Lodi, Italy
  • CREA-Council for Agricultural Research and Economics, Rice Research Unit, 13100 Vercelli, Italy
  • CREA-Council for Agricultural Research and Economics, Genomics Research Centre, 29017 Fiorenzuola d’Arda (Piacenza), Italy, 5 Department of Plant Breeding & Genetics, Cornell University, Ithaca, NY, United States of America

Corresponding Author

  • filippo.biscarini@ptp.it