Os01g0781100

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0781100| Description = Similar to NBS-LRR protein (Fragment)| Version = NM_001050977.1 GI:115440324 GeneID:4327841| Length = 4529 bp| Defi...")
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Gene Name

Os01g0781100

Description

Similar to NBS-LRR protein (Fragment)

Version

NM_001050977.1 GI:115440324 GeneID:4327841

Length

4529 bp

Definition

Oryza sativa Japonica Group Os01g0781100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34847549..34852077

Sequence Coding Region

34847991..34851812

Expression

GEO Profiles:Os01g0781100

Genome Context

<gbrowseImage1> name=NC_008394:34847549..34852077 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34847549..34852077 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtgtgagctccaagaactggaggccaccatcctgccacagtttcagctggtgatcgaagcagccgagaagagtccccataagggcaagatcgaaaggtggctgcgcaaactgaaagcagctttctatgacactgaagatgtgctggatgagctcgagtatgacatcctcaagcgtgtagcagagaaaggcgcacaagcatcgttgatggttgcctcctctaattccgttccaaagcctctgcatgctgcatccaacaagatgtccaatttgcgccctaagaacaggaagctaatcagcaagctcgaagaactgaaggaaatcttggtggaagctaaggcttttcacgatcagcttggcatacaagctggcaattcgacagaacttatggtcacagcacccatcaggcctaacaccaccacttccttttcctcatcaaatgttgttggtcgcgacgaggatcgtgatcgtataattgatattctctgtaagcctgtgaatgccggaggtagcatggctaggtggtactcatctctggcaattgttggagttggtggtatgggaaaaactacactagctcagcatgtctacaatgatgaaagggtggctcagtattttgatgccaggatttgggtctgcatctcgcgcaaacttgatgtgcatcgtcacacgcaagagatcattgagtccgctggaaagggcgagtgcccacgtattggcaatctcgatacccttcagtgcaaattaagggacatattgcaagaatcagagaagttcctgctagtgttggatgatgtttggtttgacgaatccaaaagtgagacagagtgggactgggagcaactgttagctcctatagcttctctgcagaggggaagcaaaattctagtaacgtcccgccggaatgcacttccagctgttcttgactgcaagaaaatttttcctctggaaagcttgaaagatactgatttcttgacaatcttcaaaagccatgccttttctggagctgaaaccagtgatccttggctgcgcgagaagctagagattgccaagaagatctccagaaggcttggacaatcaccgttggcagcaaaagctgtcggttctcagttgagcaggaaaaaggatatagctacatggagagctgctttaaagaatggcaacttaagcgagactagaaaagctctattgtggagttatgagaagttagatccacgtcttcagaggtgctttctgtattgcagcttatttccaaaaggtcaccagtatgaaattgatgagttggttcacctttgggtggcggagggattagttgattcatgctaccagaataacagaatggaagatattggcagagattatttcaatgagatggtgtctggatctttctttcaaccagtttctaaaacatatgtgggtacacggtatattatgcacgatctcctccatgatttggcagaggcactatctaaagaagattgcttcaggttagacgatgataaggtgaaagaaatgccatccactgttcggcatctgtctgtctgtgttcagagtatgacactgcataagcaaagtatctgcaagctacatcatttgcgcactgttatctgtattgacccactcacggatgatggaaccgatattttcaatgaggtagtgcggaaactgaagaagttgcgtgtactatatttgtcattttacaacactaccaatttgcctgaatccattgcagagctcaatcaccttcggtatttgaatatcatcaaaacgtttatttctgaactaccaagatcattgtgtactctgtaccacttacagctacttcagttaaacaataaagttaagagcttgccccacagactctgcaatttaagcaagttacggcaccttgaagcatacgacaatagaatagatatattgatcaaagcagatttgcctcaaattcctgacattggcaagctaagttcgctccaacatatgaatgacttttacgtgcaaaagcagaagggatacgagttacgacaaatgagggacatgaatgagcttggtggcaatttgagagtcagaaatcttgagaatgtctatgggaaaaatgaagccttagaggcgaagctgcatcagaaaactcgacttaaaggcctgcatctttcctggaaacatatgggtgacatggatatagaaggtgtttcacatttcgagattctagaaggcctgatgccgccacctcaattggagcgccttacaatcgaaggttacaaatccgccatgtatccaagctggttacttgatggctcctattttgaaaatctagaatcttttaggcttgttaattgcagtgagctcggaagcctaccttccaatacggagctctttgggcgctgcatggcactaaccctttgggatgtcccaaatgtgaagacattatcttttcttccagaaggtctcacaagcctatcaattgacaggtgcccactgcttctgtttagtactaacaatgagctggaacatcatgatcatagtgagagttctatgaggacggatcacctggcaaaacatgttttaatcgcggaggcaggttctggttcagacactaggagcgcactgttgtcagaacattcatctatgaagcagttggcaacattgatgtgtgcggatatatcggaaaatcttcaaaccattaaaagcaatttagaaaaagagagagatgaagcattggtgaaagaagacaccattgaagcatggttgtgttgccacaaggagaggatgagattcatttattcagcgaagagtgggctgccgttggttccaccatcaggactttgcgaactctatctttcttcatgcagtattacagatggagctttagctctttgcattggtggcctcacttcacttagagaattgagcttaacaaacattatgactttaactacgcttccatcggaagaggtcctccaacatctggccaatctcaatttcttggccattcgttcctgttggtgtatcagatcgttggggggcttgcgagctgtctctattaaagaaatgagattgttttcctgcccttctttagagttggcatgtggcgcagagtttataccattgtcccttaggagactatgtatatacaggtgcgttgttggagccgacttcttctgtggtgattggccgcagatgagggaaattctcttatgccagtgcagaagctctgcgtccttgcatgttggtggcctaacctcccttgaattattcgcactatatcacttgccagatttgtgcgtgctggaagtctcgtcatcccctcgacttcaccaggtgcatttgataaatgttccgaagcttactgccaagtgtatctcacagttccgtgtccagcattcactccatattagcagttctctgattctcaactacatgctatctgctgaagctttcgtacttccagcatatctctctcttgaaaggtgcaaggacccatccatttcatttgaagaatctgcaattttcacatctgtcgagtggctgagattatctaagtgtgaaatgagatcactacaaggaaatatgaagtgcctatccagtctaaagaaactcgatatctatgattgccccaacatatcatctctaccagatctaccgtcttccctccagcatatatgcatatggaattgcaaactcttggaggagagctgccgagcacctgatggagaaagctggccaaagattttaagattgcccatatccgctggaaggaattcagatgaattgtgcatcagaatcacaactacacaacagtggttgcgttggttgcttggttag</cdnaseq>

Protein Sequence

<aaseq>MVCELQELEATILPQFQLVIEAAEKSPHKGKIERWLRKLKAAFY DTEDVLDELEYDILKRVAEKGAQASLMVASSNSVPKPLHAASNKMSNLRPKNRKLISK LEELKEILVEAKAFHDQLGIQAGNSTELMVTAPIRPNTTTSFSSSNVVGRDEDRDRII DILCKPVNAGGSMARWYSSLAIVGVGGMGKTTLAQHVYNDERVAQYFDARIWVCISRK LDVHRHTQEIIESAGKGECPRIGNLDTLQCKLRDILQESEKFLLVLDDVWFDESKSET EWDWEQLLAPIASLQRGSKILVTSRRNALPAVLDCKKIFPLESLKDTDFLTIFKSHAF SGAETSDPWLREKLEIAKKISRRLGQSPLAAKAVGSQLSRKKDIATWRAALKNGNLSE TRKALLWSYEKLDPRLQRCFLYCSLFPKGHQYEIDELVHLWVAEGLVDSCYQNNRMED IGRDYFNEMVSGSFFQPVSKTYVGTRYIMHDLLHDLAEALSKEDCFRLDDDKVKEMPS TVRHLSVCVQSMTLHKQSICKLHHLRTVICIDPLTDDGTDIFNEVVRKLKKLRVLYLS FYNTTNLPESIAELNHLRYLNIIKTFISELPRSLCTLYHLQLLQLNNKVKSLPHRLCN LSKLRHLEAYDNRIDILIKADLPQIPDIGKLSSLQHMNDFYVQKQKGYELRQMRDMNE LGGNLRVRNLENVYGKNEALEAKLHQKTRLKGLHLSWKHMGDMDIEGVSHFEILEGLM PPPQLERLTIEGYKSAMYPSWLLDGSYFENLESFRLVNCSELGSLPSNTELFGRCMAL TLWDVPNVKTLSFLPEGLTSLSIDRCPLLLFSTNNELEHHDHSESSMRTDHLAKHVLI AEAGSGSDTRSALLSEHSSMKQLATLMCADISENLQTIKSNLEKERDEALVKEDTIEA WLCCHKERMRFIYSAKSGLPLVPPSGLCELYLSSCSITDGALALCIGGLTSLRELSLT NIMTLTTLPSEEVLQHLANLNFLAIRSCWCIRSLGGLRAVSIKEMRLFSCPSLELACG AEFIPLSLRRLCIYRCVVGADFFCGDWPQMREILLCQCRSSASLHVGGLTSLELFALY HLPDLCVLEVSSSPRLHQVHLINVPKLTAKCISQFRVQHSLHISSSLILNYMLSAEAF VLPAYLSLERCKDPSISFEESAIFTSVEWLRLSKCEMRSLQGNMKCLSSLKKLDIYDC PNISSLPDLPSSLQHICIWNCKLLEESCRAPDGESWPKILRLPISAGRNSDELCIRIT TTQQWLRWLLG</aaseq>

Gene Sequence

<dnaseqindica>443..4264#aaggcagtcccatgtgagttatccatataaacctaagtctgctcatcttttatatttgcaaccctcgtgtttcttaaataaagtgttgattgttcactgttagtctatcatctaccccaaaggtttggttgttcctatttcctattgttttctcattcatatgaatatttgagagcactaatcttcatccttggctctgataactcccaggttctcatctctcacttttgcttctttgattataggcctgaagtccagaaagtcctttggtcatgtgctgctctttccactctgagaagcagcagccacgagactattaaaccaagggaacatctgttacggttccttggcggaggcagcagcgctggctgccttaggatgggtggtatcaccgatcatcaccaagttcatcaaccgcgcctcaacctaccttggcaaggacatggtgtgtgagctccaagaactggaggccaccatcctgccacagtttcagctggtgatcgaagcagccgagaagagtccccataagggcaagatcgaaaggtggctgcgcaaactgaaagcagctttctatgacactgaagatgtgctggatgagctcgagtatgacatcctcaagcgtgtagcagagaaaggcgcacaagcatcgttgatggttgcctcctctaattccgttccaaagcctctgcatgctgcatccaacaagatgtccaatttgcgccctaagaacaggaagctaatcagcaagctcgaagaactgaaggaaatcttggtggaagctaaggcttttcacgatcagcttggcatacaagctggcaattcgacagaacttatggtcacagcacccatcaggcctaacaccaccacttccttttcctcatcaaatgttgttggtcgcgacgaggatcgtgatcgtataattgatattctctgtaagcctgtgaatgccggaggtagcatggctaggtggtactcatctctggcaattgttggagttggtggtatgggaaaaactacactagctcagcatgtctacaatgatgaaagggtggctcagtattttgatgccaggatttgggtctgcatctcgcgcaaacttgatgtgcatcgtcacacgcaagagatcattgagtccgctggaaagggcgagtgcccacgtattggcaatctcgatacccttcagtgcaaattaagggacatattgcaagaatcagagaagttcctgctagtgttggatgatgtttggtttgacgaatccaaaagtgagacagagtgggactgggagcaactgttagctcctatagcttctctgcagaggggaagcaaaattctagtaacgtcccgccggaatgcacttccagctgttcttgactgcaagaaaatttttcctctggaaagcttgaaagatactgatttcttgacaatcttcaaaagccatgccttttctggagctgaaaccagtgatccttggctgcgcgagaagctagagattgccaagaagatctccagaaggcttggacaatcaccgttggcagcaaaagctgtcggttctcagttgagcaggaaaaaggatatagctacatggagagctgctttaaagaatggcaacttaagcgagactagaaaagctctattgtggagttatgagaagttagatccacgtcttcagaggtgctttctgtattgcagcttatttccaaaaggtcaccagtatgaaattgatgagttggttcacctttgggtggcggagggattagttgattcatgctaccagaataacagaatggaagatattggcagagattatttcaatgagatggtgtctggatctttctttcaaccagtttctaaaacatatgtgggtacacggtatattatgcacgatctcctccatgatttggcagaggcactatctaaagaagattgcttcaggttagacgatgataaggtgaaagaaatgccatccactgttcggcatctgtctgtctgtgttcagagtatgacactgcataagcaaagtatctgcaagctacatcatttgcgcactgttatctgtattgacccactcacggatgatggaaccgatattttcaatgaggtagtgcggaaactgaagaagttgcgtgtactatatttgtcattttacaacactaccaatttgcctgaatccattgcagagctcaatcaccttcggtatttgaatatcatcaaaacgtttatttctgaactaccaagatcattgtgtactctgtaccacttacagctacttcagttaaacaataaagttaagagcttgccccacagactctgcaatttaagcaagttacggcaccttgaagcatacgacaatagaatagatatattgatcaaagcagatttgcctcaaattcctgacattggcaagctaagttcgctccaacatatgaatgacttttacgtgcaaaagcagaagggatacgagttacgacaaatgagggacatgaatgagcttggtggcaatttgagagtcagaaatcttgagaatgtctatgggaaaaatgaagccttagaggcgaagctgcatcagaaaactcgacttaaaggcctgcatctttcctggaaacatatgggtgacatggatatagaaggtgtttcacatttcgagattctagaaggcctgatgccgccacctcaattggagcgccttacaatcgaaggttacaaatccgccatgtatccaagctggttacttgatggctcctattttgaaaatctagaatcttttaggcttgttaattgcagtgagctcggaagcctaccttccaatacggagctctttgggcgctgcatggcactaaccctttgggatgtcccaaatgtgaagacattatcttttcttccagaaggtctcacaagcctatcaattgacaggtgcccactgcttctgtttagtactaacaatgagctggaacatcatgatcatagtgagagttctatgaggacggatcacctggcaaaacatgttttaatcgcggaggcaggttctggttcagacactaggagcgcactgttgtcagaacattcatctatgaagcagttggcaacattgatgtgtgcggatatatcggaaaatcttcaaaccattaaaagcaatttagaaaaagagagagatgaagcattggtgaaagaagacaccattgaagcatggttgtgttgccacaaggagaggatgagattcatttattcagcgaagagtgggctgccgttggttccaccatcaggactttgcgaactctatctttcttcatgcagtattacagatggagctttagctctttgcattggtggcctcacttcacttagagaattgagcttaacaaacattatgactttaactacgcttccatcggaagaggtcctccaacatctggccaatctcaatttcttggccattcgttcctgttggtgtatcagatcgttggggggcttgcgagctgtctctattaaagaaatgagattgttttcctgcccttctttagagttggcatgtggcgcagagtttataccattgtcccttaggagactatgtatatacaggtgcgttgttggagccgacttcttctgtggtgattggccgcagatgagggaaattctcttatgccagtgcagaagctctgcgtccttgcatgttggtggcctaacctcccttgaattattcgcactatatcacttgccagatttgtgcgtgctggaagtctcgtcatcccctcgacttcaccaggtgcatttgataaatgttccgaagcttactgccaagtgtatctcacagttccgtgtccagcattcactccatattagcagttctctgattctcaactacatgctatctgctgaagctttcgtacttccagcatatctctctcttgaaaggtgcaaggacccatccatttcatttgaagaatctgcaattttcacatctgtcgagtggctgagattatctaagtgtgaaatgagatcactacaaggaaatatgaagtgcctatccagtctaaagaaactcgatatctatgattgccccaacatatcatctctaccagatctaccgtcttccctccagcatatatgcatatggaattgcaaactcttggaggagagctgccgagcacctgatggagaaagctggccaaagattttaagattgcccatatccgctggaaggaattcagatgaattgtgcatcagaatcacaactacacaacagtggttgcgttggttgcttggttagtctgaaggagaggaaaaaccgggtctttgattgtggtgccaaatcctggccgcggctattcgctaaaattgcagaagaagcaaagcaatggagcttggccggccggccaattgtagagttagtactaccaagcagtctcttttcgtcgtaggtcgttttccatactttgggagatattgctttgtgtctgttccagcctcttggtgttctgtaaactctcctatgaaatcttaatacgaattaatggtgtgcactgttcatacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0781100, RefSeq:Os01g0781100