Os01g0783500

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0783500| Description = Universal stress protein (Usp) family protein| Version = NM_001050989.1 GI:115440348 GeneID:4327057| Length = 3126 b...")
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Gene Name

Os01g0783500

Description

Universal stress protein (Usp) family protein

Version

NM_001050989.1 GI:115440348 GeneID:4327057

Length

3126 bp

Definition

Oryza sativa Japonica Group Os01g0783500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34954454..34957579

Sequence Coding Region

34954752..34954759,34956551..34957331

Expression

GEO Profiles:Os01g0783500

Genome Context

<gbrowseImage1> name=NC_008394:34954454..34957579 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34954454..34957579 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaacccctcctccccgtcggcgggcggcggcggcgacgtgtcggcgtcctcgccgacgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccaccccacctcgccgcggtacttcttctcctcgctcgcgggcaccaacgcctccccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgctctacggcgccgactggggctccatccccgtctccgtctccgacgacgccgacggggaggtcgcacccgcggcatccgcggaggagctgcagaagaagcgggaggaggacttcgacgccttcacgtccaccaaggcggaggacctggcgcagccgctggtcgacgcgcagatcccctttaagatccacgtcgtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgacttggcttgtccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggcgggaaggggaggcttgggagtgttagtgattattgcgtgcatcactgtgtctgcccggttgtggttgttcgttaccccgatgatgctgcaggtgccgacggggaggcagcagggccaacagatgagctgcacactgtgcctgaggatgaacctgtgtatcatgatgcacctgatgtgcagaaagaaaactga</cdnaseq>

Protein Sequence

<aaseq>MAANPSSPSAGGGGDVSASSPTLPPVRLAAAQAASAAAIHPTSP RYFFSSLAGTNASPHRRIAIAVDLSDESAYAVRWAVQNYLRPGDAVVLLHVRPTSVLY GADWGSIPVSVSDDADGEVAPAASAEELQKKREEDFDAFTSTKAEDLAQPLVDAQIPF KIHVVKDHDMKERLCLEAERLGLSAMIMGSRGFGASRKGGKGRLGSVSDYCVHHCVCP VVVVRYPDDAAGADGEAAGPTDELHTVPEDEPVYHDAPDVQKEN</aaseq>

Gene Sequence

<dnaseqindica>2821..2828#249..1029#ccatcatcagagagggatcaggcagagaagcaggagcaacgtatacaacaagtcattcggttcaatcccccacccacaacatcacagcacggttgccgcttgctccggtgtcacactccccttgtctcgcctcgcctagtcgcctcgcctcttccgtttcaccaccaccgtctcggatcaaaccggccaacatctcgcctcgccgagaaattcccaaacgaggaagaggggaaaaggagttcatccccatggcggccaacccctcctccccgtcggcgggcggcggcggcgacgtgtcggcgtcctcgccgacgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccaccccacctcgccgcggtacttcttctcctcgctcgcgggcaccaacgcctccccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgctctacggcgccgactggggctccatccccgtctccgtctccgacgacgccgacggggaggtcgcacccgcggcatccgcggaggagctgcagaagaagcgggaggaggacttcgacgccttcacgtccaccaaggcggaggacctggcgcagccgctggtcgacgcgcagatcccctttaagatccacgtcgtcaaggaccacgacatgaaggagcgcctctgcctcgaggccgagcgacttggcttgtccgctatgatcatgggaagccgcggcttcggtgcctcgcggaagggcgggaaggggaggcttgggagtgttagtgattattgcgtgcatcactgtgtctgcccggttgtggttgttcgttaccccgatgatgctgcaggtgccgacggggaggcagcagggccaacagatgagctgcacactgtgcctgaggatgaacctgtgtatcatgatgcacctgatgtgcagaaaggtttgcccttttacattgctcaattcaatcgctattaactgtatttgctgatttatcggtttattaccatgagttgttcattgaaatgatttactatagacatgtttggaacggaacaaaatattagaaccataaatgtcataacagttagtactcagtaaaaactaagaagctatgtttactaagcgtatcaacctgtgttctttcatataagattgtaaaggtgatgagtttgatgccctagtctttttcactgcatggtttgatcttattttgactagccactgtagtttttttaataagcttttgttaattattggaagacacggtaaggatgctgtacctctgtgtggaactataatgttgattcctttgttgcggtgaacacttggcaagccgaacaccgtagaaattagtagtggtaagttcaaataagttcgcatatcaaggggattaggggaatttgcattgtagaacatgttcaactgcaatgtaaaagttagtcaaactttgcaatttcgctaaagcaatgcaaggctacatgactagaatagtctcttactctctttccgaaggtctaatctgccacagttttgactccttttaaagtagaaatttattttgttgttgcctgcatggctggatggcaggccttcttcaatcaagggtggtttatgttactgttacaaaggtttcttttactgcaatatatagttagaatcatggcatgctttggaaacttagacatacattttctcctgtgaaaatatcttgccatctgttctgcatttctgccccaatccttaactctccttacaaatgaatttcttgccatattaatttgagttgtttttttgttaactatcagtttaattcctctttttgtcttatgacatgtttggcccgcctgatcaggaataggatccttgcttctgttattgccctgagatcatcagctattttcatccacataatcatgttgttactttcccttagttgcattgcctaacaattttcacgaagtatgtaatcattcagttgattcatgccactcatcattatccacagattattgatttgtaacactctagttcattacttcatttccaatgaccttatatcagcctagttacggatggttcatttcataacttacatcttctggtattctaatttgcatgtggttgactggttgatggaataaatgaacatggggctagcaacctatttagttcatgaccacagtttgtgacaattgctgttcatgagtaatgatagatgctagttttgtttacttgtcattttgggctgacaaatggaccaacatgtgacaatagctgcagggagtggtggaaatatatagcataaaggccatatgcagggacatttcccatattcgtcaaactgtaggttgtgtgcttagtacttatggttgtgctacaagtgggtaatgggcggcttcttagttctggcatcttaccgagtcactgggggttgtctgacattcacatagtgcttggtccttgtaaacgtcaatttacttgaaccaatcaagttatcttgttgtcctaatctctttctatttcagttcttcgttcgacacacttgtatagctaatgcacctatctggcacacatattttcagtagcttccttgtctgttgaatgctcatgtttgttttgaactcttacttatatgcgataatgtatgccacctgctgtctacttttgtgttggacaaattaacatacaatgctactggaattgattcctctgtttcgattcactgcagaaaactgaggtaatgcatctggagcgcaaggaaaacgtgagaggcttgcccgaggcgatctgtgtatttgaacaatgcaactactgtttagctgttggcctgttgcttctgtatctactggatatcataaactggcttgaccagcaagctgcttttcattttgcgtgaagtattggactctttagatcaggggagtttgttggtttactttgtaaactgatacagtccagtatccccgtgggtggtggagaaaggagctgtgtatgggatgttttcgttggtcacgaatccatgttgtttcatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0783500, RefSeq:Os01g0783500